RNA–Protein interactions for RNA: YKL184W

SPE1, Transcript of Ornithine decarboxylase, yeast

Gene SPE1, Length 1,401 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPE1	YKL184W	PUS2	P53167	370 aa		3.82	□□□□□ -1.8
SPE1	YKL184W	UPC2	Q12151	913 aa		3.82	□□□□□ -1.8
SPE1	YKL184W	CIT1	P00890	479 aa		3.81	□□□□□ -1.8
SPE1	YKL184W	MPH2	P0CD99	609 aa		3.81	□□□□□ -1.8
SPE1	YKL184W	KAR4	P25583	335 aa		3.81	□□□□□ -1.8
SPE1	YKL184W	PET10	P36139	283 aa		3.81	□□□□□ -1.8
SPE1	YKL184W	GGA2	P38817	585 aa	Known RBP	3.81	□□□□□ -1.8
SPE1	YKL184W	SSL1	Q04673	461 aa	Predicted RBP	3.81	□□□□□ -1.8
SPE1	YKL184W	HBN1	Q96VH4	193 aa		3.81	□□□□□ -1.8
SPE1	YKL184W	MSD1	P15179	658 aa	Known RBP	3.8	□□□□□ -1.8
SPE1	YKL184W	HRR25	P29295	494 aa	Known RBP	3.8	□□□□□ -1.8
SPE1	YKL184W	NNF1	P47149	201 aa		3.8	□□□□□ -1.8
SPE1	YKL184W	SUN4	P53616	420 aa		3.8	□□□□□ -1.8
SPE1	YKL184W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	3.8	□□□□□ -1.8	not detected
SPE1	YKL184W	YKR011C	Q02209	353 aa		3.8	□□□□□ -1.8
SPE1	YKL184W	FLC1	Q08967	793 aa		3.8	□□□□□ -1.8
SPE1	YKL184W	SWM1	Q12379	170 aa		3.8	□□□□□ -1.8
SPE1	YKL184W	TOM70	P07213	617 aa	Known RBP	3.79	□□□□□ -1.8
SPE1	YKL184W	URA1	P28272	314 aa	Predicted RBP	3.79	□□□□□ -1.8
SPE1	YKL184W	RPD3	P32561	433 aa		3.79	□□□□□ -1.8
SPE1	YKL184W	MSS4	P38994	779 aa		3.79	□□□□□ -1.8
SPE1	YKL184W	NOG2	P53742	486 aa	Known RBP	3.79	□□□□□ -1.8
SPE1	YKL184W	BUL2	Q03758	920 aa	Known RBP	3.79	□□□□□ -1.8
SPE1	YKL184W	PEX19	Q07418	342 aa		3.79	□□□□□ -1.8
SPE1	YKL184W	YOR131C	Q12486	218 aa		3.79	□□□□□ -1.8
SPE1	YKL184W	ERT1	P38140	529 aa		3.78	□□□□□ -1.8
SPE1	YKL184W	SDP1	P40479	209 aa		3.78	□□□□□ -1.8
SPE1	YKL184W	UBP6	P43593	499 aa	Known RBP	3.78	□□□□□ -1.8
SPE1	YKL184W	HUL5	P53119	910 aa		3.78	□□□□□ -1.8
SPE1	YKL184W	DAM1	P53267	343 aa		3.78	□□□□□ -1.8
SPE1	YKL184W	CTF4	Q01454	927 aa		3.78	□□□□□ -1.8
SPE1	YKL184W	CDC53	Q12018	815 aa	Known RBP	3.78	□□□□□ -1.8
SPE1	YKL184W	STI1	P15705	589 aa	Known RBP RIP-Chip data	3.78	□□□□□ -1.8	not detected
SPE1	YKL184W	CYS3	P31373	394 aa	Known RBP	3.78	□□□□□ -1.8
SPE1	YKL184W	EFT1	P32324	842 aa	Known RBP	3.78	□□□□□ -1.8
SPE1	YKL184W	NGG1	P32494	702 aa		3.78	□□□□□ -1.8
SPE1	YKL184W	SAP190	P36123	1033 aa		3.78	□□□□□ -1.8
SPE1	YKL184W	KTR4	P38131	464 aa		3.78	□□□□□ -1.8
SPE1	YKL184W	ENV7	Q12003	364 aa		3.78	□□□□□ -1.8
SPE1	YKL184W	TRP4	P07285	380 aa	Predicted RBP	3.77	□□□□□ -1.81
SPE1	YKL184W	FBP1	P09201	348 aa		3.77	□□□□□ -1.81
SPE1	YKL184W	TOP3	P13099	656 aa		3.77	□□□□□ -1.81
SPE1	YKL184W	GAL11	P19659	1081 aa		3.77	□□□□□ -1.81
SPE1	YKL184W	STE14	P32584	239 aa		3.77	□□□□□ -1.81
SPE1	YKL184W	SUL1	P38359	859 aa		3.77	□□□□□ -1.81
SPE1	YKL184W	HDA1	P53973	706 aa		3.77	□□□□□ -1.81
SPE1	YKL184W	KIN4	Q01919	800 aa		3.77	□□□□□ -1.81
SPE1	YKL184W	TAF8	Q03750	510 aa		3.77	□□□□□ -1.81
SPE1	YKL184W	YDR514C	Q04408	483 aa		3.77	□□□□□ -1.81
SPE1	YKL184W	DAL7	P21826	554 aa		3.76	□□□□□ -1.81
SPE1	YKL184W	YHR078W	P38799	552 aa		3.76	□□□□□ -1.81
SPE1	YKL184W	CTF8	P38877	133 aa		3.76	□□□□□ -1.81
SPE1	YKL184W	RSP5	P39940	809 aa	Known RBP	3.76	□□□□□ -1.81
SPE1	YKL184W	REH1	Q06709	432 aa		3.76	□□□□□ -1.81
SPE1	YKL184W	PRC1	P00729	532 aa		3.75	□□□□□ -1.81
SPE1	YKL184W	CAN1	P04817	590 aa		3.75	□□□□□ -1.81
SPE1	YKL184W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	3.75	□□□□□ -1.81	not detected
SPE1	YKL184W	ERG4	P25340	473 aa		3.75	□□□□□ -1.81
SPE1	YKL184W	SRP40	P32583	406 aa	Predicted RBP	3.75	□□□□□ -1.81
SPE1	YKL184W	EMC3	P36039	253 aa		3.75	□□□□□ -1.81
SPE1	YKL184W	YHR020W	P38708	688 aa	Known RBP	3.75	□□□□□ -1.81
SPE1	YKL184W	PZF1	P39933	429 aa		3.75	□□□□□ -1.81
SPE1	YKL184W	CHZ1	P40019	153 aa	Predicted RBP	3.75	□□□□□ -1.81
SPE1	YKL184W	ALG2	P43636	503 aa		3.75	□□□□□ -1.81
SPE1	YKL184W	RNT1	Q02555	471 aa		3.75	□□□□□ -1.81
SPE1	YKL184W	NSE3	Q05541	303 aa		3.75	□□□□□ -1.81
SPE1	YKL184W	BDF2	Q07442	638 aa		3.75	□□□□□ -1.81
SPE1	YKL184W	TRM11	Q12463	433 aa		3.75	□□□□□ -1.81
SPE1	YKL184W	MET3	P08536	511 aa		3.74	□□□□□ -1.81
SPE1	YKL184W	SEC21	P32074	935 aa	Known RBP	3.74	□□□□□ -1.81
SPE1	YKL184W	ZDS1	P50111	915 aa	Known RBP	3.74	□□□□□ -1.81
SPE1	YKL184W	PKH1	Q03407	766 aa		3.74	□□□□□ -1.81
SPE1	YKL184W	LAS17	Q12446	633 aa		3.74	□□□□□ -1.81
SPE1	YKL184W	YOL098C	Q12496	1037 aa		3.74	□□□□□ -1.81
SPE1	YKL184W	CTF13	P35203	478 aa		3.73	□□□□□ -1.81
SPE1	YKL184W	VHR1	P40522	640 aa		3.73	□□□□□ -1.81
SPE1	YKL184W	SHR5	P41912	237 aa		3.73	□□□□□ -1.81
SPE1	YKL184W	TAD1	P53065	400 aa		3.73	□□□□□ -1.81
SPE1	YKL184W	YGR283C	P53336	341 aa	Predicted RBP	3.73	□□□□□ -1.81
SPE1	YKL184W	DUS1	P53759	423 aa	Known RBP	3.73	□□□□□ -1.81
SPE1	YKL184W	TIM44	Q01852	431 aa		3.73	□□□□□ -1.81
SPE1	YKL184W	DLT1	Q04216	342 aa		3.73	□□□□□ -1.81
SPE1	YKL184W	RSC3	Q06639	885 aa		3.73	□□□□□ -1.81
SPE1	YKL184W	YLR040C	Q07988	224 aa		3.73	□□□□□ -1.81
SPE1	YKL184W	YOL073C	Q08232	322 aa		3.73	□□□□□ -1.81
SPE1	YKL184W	HAL9	Q12180	1030 aa		3.73	□□□□□ -1.81
SPE1	YKL184W	YOR022C	Q12204	715 aa		3.73	□□□□□ -1.81
SPE1	YKL184W	RPP1	P38786	293 aa		3.72	□□□□□ -1.81
SPE1	YKL184W	SET5	P38890	526 aa	Known RBP	3.72	□□□□□ -1.81
SPE1	YKL184W	UBA2	P52488	636 aa		3.72	□□□□□ -1.81
SPE1	YKL184W	BET3	P36149	193 aa		3.71	□□□□□ -1.82
SPE1	YKL184W	CHS7	P38843	316 aa		3.71	□□□□□ -1.82
SPE1	YKL184W	SAK1	P38990	1142 aa		3.71	□□□□□ -1.82
SPE1	YKL184W	GYP8	P43570	497 aa		3.71	□□□□□ -1.82
SPE1	YKL184W	SSY5	P47002	699 aa		3.71	□□□□□ -1.82
SPE1	YKL184W	SLI1	P53304	468 aa		3.71	□□□□□ -1.82
SPE1	YKL184W	MET7	Q08645	548 aa		3.71	□□□□□ -1.82
SPE1	YKL184W	DIF1	O13577	133 aa		3.7	□□□□□ -1.82
SPE1	YKL184W	ALG7	P07286	448 aa		3.7	□□□□□ -1.82
SPE1	YKL184W	CAF20	P12962	161 aa	Known RBP	3.7	□□□□□ -1.82

Retrieved 100 of 5,963 RNA–protein pairs in 113.3 ms