RNA–Protein interactions for RNA: YKL184W

SPE1, Transcript of Ornithine decarboxylase, yeastyeast

Gene SPE1, Length 1,401 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPE1YKL184W MTC1P47018 478 aaKnown RBP10.64□□□□□ -0.71
SPE1YKL184W DRS1P32892 752 aaKnown RBP10.31□□□□□ -0.76
SPE1YKL184W FAP1P53971 965 aa9.3□□□□□ -0.92
SPE1YKL184W DIP2Q12220 943 aaPredicted RBP8.91□□□□□ -0.98
SPE1YKL184W ISW2Q08773 1120 aa8.82□□□□□ -1
SPE1YKL184W PRI1P10363 409 aa8.78□□□□□ -1
SPE1YKL184W BFR2Q06631 534 aaKnown RBP8.74□□□□□ -1.01
SPE1YKL184W AAD16Q02895 342 aa8.72□□□□□ -1.01
SPE1YKL184W PRY3P47033 881 aa8.68□□□□□ -1.02
SPE1YKL184W RPG1P38249 964 aaKnown RBP8.67□□□□□ -1.02
SPE1YKL184W AVT3P36062 692 aa8.63□□□□□ -1.03
SPE1YKL184W RSE1Q04693 1361 aaKnown RBP8.55□□□□□ -1.04
SPE1YKL184W TSR3Q12094 313 aaKnown RBP8.33□□□□□ -1.08
SPE1YKL184W RPL17AP05740 184 aaKnown RBP8.22□□□□□ -1.09
SPE1YKL184W REB1P21538 810 aa8.22□□□□□ -1.09
SPE1YKL184W RPL17BP46990 184 aaKnown RBP8.22□□□□□ -1.09
SPE1YKL184W HAA1Q12753 694 aaKnown RBP8.18□□□□□ -1.1
SPE1YKL184W MRPL32P25348 183 aa8.07□□□□□ -1.12
SPE1YKL184W YCK3P39962 524 aa8.03□□□□□ -1.12
SPE1YKL184W TFA1P36100 482 aa7.89□□□□□ -1.15
SPE1YKL184W SPT21P35209 758 aa7.81□□□□□ -1.16
SPE1YKL184W YKR023WP36119 530 aaKnown RBP7.67□□□□□ -1.18
SPE1YKL184W YGL015CP33199 130 aa7.65□□□□□ -1.18
SPE1YKL184W RIM101P33400 625 aa7.65□□□□□ -1.18
SPE1YKL184W CDC27P38042 758 aa7.61□□□□□ -1.19
SPE1YKL184W HOP09932 586 aa7.55□□□□□ -1.2
SPE1YKL184W TFC8Q12308 588 aa7.54□□□□□ -1.2
SPE1YKL184W DCD1P06773 312 aa7.49□□□□□ -1.21
SPE1YKL184W YIL055CP40523 627 aaKnown RBP7.42□□□□□ -1.22
SPE1YKL184W UBP10P53874 792 aaPredicted RBP7.42□□□□□ -1.22
SPE1YKL184W OXP1P28273 1286 aa7.37□□□□□ -1.23
SPE1YKL184W PTP3P40048 928 aa7.37□□□□□ -1.23
SPE1YKL184W MAP2P38174 421 aaKnown RBP7.36□□□□□ -1.23
SPE1YKL184W BCH2P36122 765 aa7.32□□□□□ -1.24
SPE1YKL184W SCY1P53009 804 aa7.31□□□□□ -1.24
SPE1YKL184W YAH1Q12184 172 aaKnown RBP7.29□□□□□ -1.24
SPE1YKL184W RSM7P47150 247 aa7.23□□□□□ -1.25
SPE1YKL184W SLX5P32828 619 aaKnown RBP7.22□□□□□ -1.25
SPE1YKL184W TIF4632P39936 914 aaKnown RBP7.19□□□□□ -1.26
SPE1YKL184W BBC1P47068 1157 aa7.19□□□□□ -1.26
SPE1YKL184W SSP1P38871 571 aa7.18□□□□□ -1.26
SPE1YKL184W ARP8Q12386 881 aaKnown RBP RIP-Chip data7.17□□□□□ -1.26not detected
SPE1YKL184W EPS1P40557 701 aa7.16□□□□□ -1.26
SPE1YKL184W AI2P03876 854 aa7.13□□□□□ -1.27
SPE1YKL184W YLR271WQ06152 274 aa7.13□□□□□ -1.27
SPE1YKL184W BDF1P35817 686 aa7.12□□□□□ -1.27
SPE1YKL184W TGL3P40308 642 aa7.1□□□□□ -1.27
SPE1YKL184W MGA2P40578 1113 aa6.98□□□□□ -1.29
SPE1YKL184W PSD2P53037 1138 aaKnown RBP6.98□□□□□ -1.29
SPE1YKL184W MRM1P25270 412 aa6.89□□□□□ -1.31
SPE1YKL184W CST9Q06032 482 aa6.88□□□□□ -1.31
SPE1YKL184W YAP5P40574 245 aa6.85□□□□□ -1.31
SPE1YKL184W YOR238WQ08634 303 aa6.85□□□□□ -1.31
SPE1YKL184W NSR1P27476 414 aaKnown RBP RIP-Chip data6.84□□□□□ -1.31not detected
SPE1YKL184W UBP9P39967 754 aa6.84□□□□□ -1.31
SPE1YKL184W RTG3P38165 486 aa6.81□□□□□ -1.32
SPE1YKL184W BUD31P25337 157 aaPredicted RBP6.8□□□□□ -1.32
SPE1YKL184W MST1P07236 462 aa6.78□□□□□ -1.32
SPE1YKL184W GTT3P39996 337 aa6.73□□□□□ -1.33
SPE1YKL184W YMR1P47147 688 aaKnown RBP RIP-Chip data6.73□□□□□ -1.33not detected
SPE1YKL184W VPS29P38759 282 aa6.69□□□□□ -1.34
SPE1YKL184W PIB1Q06651 286 aa6.69□□□□□ -1.34
SPE1YKL184W DBP1P24784 617 aaKnown RBP6.67□□□□□ -1.34
SPE1YKL184W RCR1P38212 213 aa6.67□□□□□ -1.34
SPE1YKL184W YBL029C-AQ3E756 94 aa6.65□□□□□ -1.35
SPE1YKL184W YFR006WP43590 535 aa6.64□□□□□ -1.35
SPE1YKL184W WSC3Q12215 556 aa6.63□□□□□ -1.35
SPE1YKL184W STS1P38637 319 aa6.61□□□□□ -1.35
SPE1YKL184W VNX1P42839 908 aa6.59□□□□□ -1.35
SPE1YKL184W SPP1Q03012 353 aa6.59□□□□□ -1.36
SPE1YKL184W SIS1P25294 352 aaKnown RBP6.58□□□□□ -1.36
SPE1YKL184W RAM2P29703 316 aa6.57□□□□□ -1.36
SPE1YKL184W VMA1P17255 1071 aaKnown RBP6.56□□□□□ -1.36
SPE1YKL184W MAK11P20484 414 aaKnown RBP6.56□□□□□ -1.36
SPE1YKL184W MSB4Q12317 492 aa6.54□□□□□ -1.36
SPE1YKL184W MIF2P35201 549 aa6.53□□□□□ -1.36
SPE1YKL184W TIF11P38912 153 aaKnown RBP6.53□□□□□ -1.36
SPE1YKL184W EAP1P36041 632 aaKnown RBP6.52□□□□□ -1.37
SPE1YKL184W SET4P42948 560 aa6.51□□□□□ -1.37
SPE1YKL184W YOL036WQ08206 761 aa6.5□□□□□ -1.37
SPE1YKL184W SAM3Q08986 587 aa6.5□□□□□ -1.37
SPE1YKL184W ULI1P43604 169 aa6.49□□□□□ -1.37
SPE1YKL184W GYP5Q12344 894 aa6.48□□□□□ -1.37
SPE1YKL184W ABP1P15891 592 aaKnown RBP6.47□□□□□ -1.37
SPE1YKL184W COQ8P27697 501 aa6.47□□□□□ -1.37
SPE1YKL184W GRE2Q12068 342 aaKnown RBP6.44□□□□□ -1.38
SPE1YKL184W ATH1P48016 1211 aa6.42□□□□□ -1.38
SPE1YKL184W NOP53Q12080 455 aaKnown RBP6.42□□□□□ -1.38
SPE1YKL184W LDB19Q12502 818 aa6.42□□□□□ -1.38
SPE1YKL184W TRP5P00931 707 aaKnown RBP6.42□□□□□ -1.38
SPE1YKL184W HTA1P04911 132 aaKnown RBP6.42□□□□□ -1.38
SPE1YKL184W HTA2P04912 132 aa6.42□□□□□ -1.38
SPE1YKL184W PTC3P34221 468 aaKnown RBP6.42□□□□□ -1.38
SPE1YKL184W RQC2Q12532 1038 aaKnown RBP6.42□□□□□ -1.38
SPE1YKL184W DCW1P36091 449 aa6.41□□□□□ -1.38
SPE1YKL184W EDS1P38073 919 aa6.4□□□□□ -1.39
SPE1YKL184W SET1P38827 1080 aaKnown RBP6.4□□□□□ -1.39
SPE1YKL184W IOC2Q12072 812 aa6.4□□□□□ -1.39
SPE1YKL184W GUT1P32190 709 aa6.39□□□□□ -1.39
SPE1YKL184W YJL171CP46992 396 aa6.37□□□□□ -1.39
Retrieved 100 of 5,963 RNA–protein pairs in 106.4 ms