RNA–Protein interactions for RNA: YKL028W

TFA1, Transcript of TFIIE large subunit, yeastyeast

Gene TFA1, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFA1YKL028W MED1Q12321 566 aa5.07□□□□□ -1.6
TFA1YKL028W DAL5P15365 543 aa5.06□□□□□ -1.6
TFA1YKL028W DBP5P20449 482 aaKnown RBP5.06□□□□□ -1.6
TFA1YKL028W CHS3P29465 1165 aa5.06□□□□□ -1.6
TFA1YKL028W CKB2P38930 258 aa5.06□□□□□ -1.6
TFA1YKL028W ACA1P39970 489 aa5.06□□□□□ -1.6
TFA1YKL028W ALG2P43636 503 aa5.06□□□□□ -1.6
TFA1YKL028W SXM1Q04175 944 aaKnown RBP5.06□□□□□ -1.6
TFA1YKL028W PHM6Q05637 104 aa5.06□□□□□ -1.6
TFA1YKL028W VIP1Q06685 1146 aaKnown RBP5.06□□□□□ -1.6
TFA1YKL028W OPY2Q06810 360 aa5.06□□□□□ -1.6
TFA1YKL028W GRC3Q07845 632 aa5.06□□□□□ -1.6
TFA1YKL028W PSK2Q08217 1101 aa5.06□□□□□ -1.6
TFA1YKL028W GPT2P36148 743 aa5.06□□□□□ -1.6
TFA1YKL028W GZF3P42944 551 aaKnown RBP5.06□□□□□ -1.6
TFA1YKL028W CNN1P43618 361 aa5.06□□□□□ -1.6
TFA1YKL028W GUS1P46655 708 aaKnown RBP RIP-Chip data5.06□□□□□ -1.6not detected
TFA1YKL028W COG8Q04632 607 aa5.06□□□□□ -1.6
TFA1YKL028W YDR056CQ12025 205 aa5.06□□□□□ -1.6
TFA1YKL028W NSI1Q12457 570 aa5.06□□□□□ -1.6
TFA1YKL028W PHR1P05066 565 aaKnown RBP RIP-Chip data5.05□□□□□ -1.6not detected
TFA1YKL028W HEM12P32347 362 aaPredicted RBP5.05□□□□□ -1.6
TFA1YKL028W MUM2P38236 366 aa5.05□□□□□ -1.6
TFA1YKL028W TMA108P40462 946 aa5.05□□□□□ -1.6
TFA1YKL028W IML2P47031 731 aa5.05□□□□□ -1.6
TFA1YKL028W VPS30Q02948 557 aa5.05□□□□□ -1.6
TFA1YKL028W EST2Q06163 884 aa5.05□□□□□ -1.6
TFA1YKL028W YDR306CQ06640 478 aa5.05□□□□□ -1.6
TFA1YKL028W CDA2Q06703 312 aa5.05□□□□□ -1.6
TFA1YKL028W GUD1Q07729 489 aa5.05□□□□□ -1.6
TFA1YKL028W YPR071WQ12346 211 aa5.05□□□□□ -1.6
TFA1YKL028W RMP1Q12530 201 aa5.05□□□□□ -1.6
TFA1YKL028W MSS18P08593 268 aa5.04□□□□□ -1.6
TFA1YKL028W YER152CP10356 443 aa5.04□□□□□ -1.6
TFA1YKL028W AAR2P32357 355 aaPredicted RBP5.04□□□□□ -1.6
TFA1YKL028W SPC29P33419 253 aa5.04□□□□□ -1.6
TFA1YKL028W MCM7P38132 845 aa5.04□□□□□ -1.6
TFA1YKL028W EXO5P38289 585 aa5.04□□□□□ -1.6
TFA1YKL028W BIT2P38346 545 aa5.04□□□□□ -1.6
TFA1YKL028W PCM1P38628 557 aaKnown RBP5.04□□□□□ -1.6
TFA1YKL028W SIT1P39980 628 aa5.04□□□□□ -1.6
TFA1YKL028W MNN11P46985 422 aaKnown RBP5.04□□□□□ -1.6
TFA1YKL028W BNA1P47096 177 aa5.04□□□□□ -1.6
TFA1YKL028W NPY1P53164 384 aa5.04□□□□□ -1.6
TFA1YKL028W ESC8Q08119 714 aa5.04□□□□□ -1.6
TFA1YKL028W VPS5Q92331 675 aa5.04□□□□□ -1.6
TFA1YKL028W SCP160P06105 1222 aaKnown RBP RIP-Chip data5.03□□□□□ -1.6not detected
TFA1YKL028W DED1P06634 604 aaKnown RBP5.03□□□□□ -1.6
TFA1YKL028W SPS1P08458 490 aa5.03□□□□□ -1.6
TFA1YKL028W PHO81P17442 1178 aa5.03□□□□□ -1.6
TFA1YKL028W DAL3P32459 195 aa5.03□□□□□ -1.6
TFA1YKL028W TSA1P34760 196 aaKnown RBP5.03□□□□□ -1.6
TFA1YKL028W RKM3P38222 552 aa5.03□□□□□ -1.6
TFA1YKL028W EMP65P40085 556 aa5.03□□□□□ -1.6
TFA1YKL028W SIP5P40210 489 aaKnown RBP5.03□□□□□ -1.6
TFA1YKL028W MPH1P40562 993 aa5.03□□□□□ -1.6
TFA1YKL028W CAF16P43569 289 aa5.03□□□□□ -1.6
TFA1YKL028W VTC2P43585 828 aa5.03□□□□□ -1.6
TFA1YKL028W HNT2P49775 206 aa5.03□□□□□ -1.6
TFA1YKL028W RAT1Q02792 1006 aaKnown RBP5.03□□□□□ -1.6
TFA1YKL028W TRS130Q03660 1102 aa5.03□□□□□ -1.6
TFA1YKL028W DOT1Q04089 582 aaKnown RBP5.03□□□□□ -1.6
TFA1YKL028W CLF1Q12309 687 aaPredicted RBP5.03□□□□□ -1.6
TFA1YKL028W PFK1P16861 987 aaKnown RBP5.02□□□□□ -1.61
TFA1YKL028W STO1P34160 861 aaKnown RBP5.02□□□□□ -1.61
TFA1YKL028W YKL077WP36081 392 aa5.02□□□□□ -1.61
TFA1YKL028W OYE3P41816 400 aaPredicted RBP5.02□□□□□ -1.61
TFA1YKL028W RSC1P53236 928 aa5.02□□□□□ -1.61
TFA1YKL028W RCM1P53972 490 aa5.02□□□□□ -1.61
TFA1YKL028W GTR1Q00582 310 aa5.02□□□□□ -1.61
TFA1YKL028W HOM3P10869 527 aa5.01□□□□□ -1.61
TFA1YKL028W URA1P28272 314 aaPredicted RBP5.01□□□□□ -1.61
TFA1YKL028W BEM3P32873 1128 aa5.01□□□□□ -1.61
TFA1YKL028W ADD66P36040 267 aa5.01□□□□□ -1.61
TFA1YKL028W DID4P36108 232 aa5.01□□□□□ -1.61
TFA1YKL028W QRI7P43122 407 aa5.01□□□□□ -1.61
TFA1YKL028W MEP3P53390 489 aa5.01□□□□□ -1.61
TFA1YKL028W YMR018WQ04364 514 aa5.01□□□□□ -1.61
TFA1YKL028W YLR352WQ06479 807 aa5.01□□□□□ -1.61
TFA1YKL028W RLP24Q07915 199 aaKnown RBP5.01□□□□□ -1.61
TFA1YKL028W SDH5Q08230 162 aa5.01□□□□□ -1.61
TFA1YKL028W YOR059CQ08448 450 aaKnown RBP5.01□□□□□ -1.61
TFA1YKL028W RET1P22276 1149 aaKnown RBP5□□□□□ -1.61
TFA1YKL028W MSM1P22438 575 aa5□□□□□ -1.61
TFA1YKL028W NUP120P35729 1037 aa5□□□□□ -1.61
TFA1YKL028W VPS8P39702 1274 aa5□□□□□ -1.61
TFA1YKL028W ERR3P42222 437 aa5□□□□□ -1.61
TFA1YKL028W GCV1P48015 400 aa5□□□□□ -1.61
TFA1YKL028W SLD3P53135 668 aa5□□□□□ -1.61
TFA1YKL028W YNR063WP53749 607 aa5□□□□□ -1.61
TFA1YKL028W LCD1Q04377 747 aa5□□□□□ -1.61
TFA1YKL028W ATG33Q06485 197 aa5□□□□□ -1.61
TFA1YKL028W YIG1Q08956 461 aa5□□□□□ -1.61
TFA1YKL028W PPH3P32345 308 aa4.99□□□□□ -1.61
TFA1YKL028W HOG1P32485 435 aa4.99□□□□□ -1.61
TFA1YKL028W APE4P38821 490 aa4.99□□□□□ -1.61
TFA1YKL028W NMD3P38861 518 aaKnown RBP4.99□□□□□ -1.61
TFA1YKL028W CCT5P40413 562 aaKnown RBP4.99□□□□□ -1.61
TFA1YKL028W YGR153WP48238 217 aa4.99□□□□□ -1.61
TFA1YKL028W CWC22P53333 577 aaKnown RBP4.99□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 10.2 ms