RNA–Protein interactions for RNA: YJR044C

VPS55, Transcript of Late endosomal protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS55, Length 423 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS55YJR044C PIN4P34217 668 aaKnown RBP RIP-Chip data2.58□□□□□ -2not detected
VPS55YJR044C MET10P39692 1035 aa2.58□□□□□ -2
VPS55YJR044C SDP1P40479 209 aa2.58□□□□□ -2
VPS55YJR044C MUP1P50276 574 aa2.58□□□□□ -2
VPS55YJR044C PRP4P20053 465 aaKnown RBP2.57□□□□□ -2
VPS55YJR044C STE13P33894 931 aa2.57□□□□□ -2
VPS55YJR044C YIL108WP40483 696 aaKnown RBP2.57□□□□□ -2
VPS55YJR044C CRR1Q05790 422 aa2.57□□□□□ -2
VPS55YJR044C COQ11Q05892 277 aa2.57□□□□□ -2
VPS55YJR044C TRM11Q12463 433 aa2.57□□□□□ -2
VPS55YJR044C YNL162W-AQ3E7A8 72 aa2.57□□□□□ -2
VPS55YJR044C FBP1P09201 348 aa2.56□□□□□ -2
VPS55YJR044C HCA4P20448 770 aaKnown RBP2.56□□□□□ -2
VPS55YJR044C KIN3P22209 435 aa2.56□□□□□ -2
VPS55YJR044C CDC48P25694 835 aaKnown RBP2.56□□□□□ -2
VPS55YJR044C TMT1P32643 299 aa2.56□□□□□ -2
VPS55YJR044C ERT1P38140 529 aa2.56□□□□□ -2
VPS55YJR044C FAA4P47912 694 aaKnown RBP2.56□□□□□ -2
VPS55YJR044C YKE2P52553 114 aa2.56□□□□□ -2
VPS55YJR044C YGR053CP53234 283 aa2.56□□□□□ -2
VPS55YJR044C OYE2Q03558 400 aaKnown RBP2.56□□□□□ -2
VPS55YJR044C ARO10Q06408 635 aa2.56□□□□□ -2
VPS55YJR044C SWM1Q12379 170 aa2.56□□□□□ -2
VPS55YJR044C CDC43P18898 376 aa2.55□□□□□ -2
VPS55YJR044C PPH3P32345 308 aa2.55□□□□□ -2
VPS55YJR044C AFR1P33304 620 aa2.55□□□□□ -2
VPS55YJR044C YKR078WP36158 585 aaKnown RBP2.55□□□□□ -2
VPS55YJR044C YBR053CP38235 358 aa2.55□□□□□ -2
VPS55YJR044C RPP1P38786 293 aa2.55□□□□□ -2
VPS55YJR044C YJL163CP46996 555 aa2.55□□□□□ -2
VPS55YJR044C RMD1Q03441 430 aa2.55□□□□□ -2
VPS55YJR044C YDR306CQ06640 478 aa2.55□□□□□ -2
VPS55YJR044C ADY2P25613 283 aa2.54□□□□□ -2
VPS55YJR044C YBR238CP38330 731 aaKnown RBP2.54□□□□□ -2
VPS55YJR044C CTF8P38877 133 aa2.54□□□□□ -2
VPS55YJR044C SNF7P39929 240 aaKnown RBP2.54□□□□□ -2
VPS55YJR044C CEP3P40969 608 aa2.54□□□□□ -2
VPS55YJR044C GUS1P46655 708 aaKnown RBP RIP-Chip data2.54□□□□□ -2not detected
VPS55YJR044C IRC13Q08630 104 aa2.54□□□□□ -2
VPS55YJR044C GGA2P38817 585 aaKnown RBP2.53□□□□□ -2
VPS55YJR044C GLO1P50107 326 aa2.53□□□□□ -2
VPS55YJR044C VPS30Q02948 557 aa2.53□□□□□ -2
VPS55YJR044C GDE1Q02979 1223 aa2.53□□□□□ -2
VPS55YJR044C YRO2P38079 344 aa2.52□□□□□ -2.01
VPS55YJR044C YHR078WP38799 552 aa2.52□□□□□ -2.01
VPS55YJR044C YIL166CP40445 542 aa2.52□□□□□ -2.01
VPS55YJR044C VHR1P40522 640 aa2.52□□□□□ -2.01
VPS55YJR044C HDA1P53973 706 aa2.52□□□□□ -2.01
VPS55YJR044C YKR011CQ02209 353 aa2.52□□□□□ -2.01
VPS55YJR044C FAL1Q12099 399 aaKnown RBP2.52□□□□□ -2.01
VPS55YJR044C RFA1P22336 621 aaKnown RBP2.51□□□□□ -2.01
VPS55YJR044C SBA1P28707 216 aaKnown RBP2.51□□□□□ -2.01
VPS55YJR044C TYE7P33122 291 aaPredicted RBP2.51□□□□□ -2.01
VPS55YJR044C VBA5P36172 582 aa2.51□□□□□ -2.01
VPS55YJR044C CBR1P38626 284 aaKnown RBP2.51□□□□□ -2.01
VPS55YJR044C RIA1P53893 1110 aa2.51□□□□□ -2.01
VPS55YJR044C SEC5P89102 971 aa2.51□□□□□ -2.01
VPS55YJR044C AGP1P25376 633 aa2.5□□□□□ -2.01
VPS55YJR044C AAR2P32357 355 aaPredicted RBP2.5□□□□□ -2.01
VPS55YJR044C EMP70P32802 667 aa2.5□□□□□ -2.01
VPS55YJR044C HIS7P33734 552 aaKnown RBP2.5□□□□□ -2.01
VPS55YJR044C MNR2P35724 969 aa2.5□□□□□ -2.01
VPS55YJR044C ILV6P25605 309 aaKnown RBP2.49□□□□□ -2.01
VPS55YJR044C URA1P28272 314 aaPredicted RBP2.49□□□□□ -2.01
VPS55YJR044C YKL069WP36088 180 aa2.49□□□□□ -2.01
VPS55YJR044C ASI2P53895 289 aa2.49□□□□□ -2.01
VPS55YJR044C ASM4Q05166 528 aa2.49□□□□□ -2.01
VPS55YJR044C ADE8P04161 214 aa2.48□□□□□ -2.01
VPS55YJR044C PRI2P20457 528 aa2.48□□□□□ -2.01
VPS55YJR044C SPO11P23179 398 aa2.48□□□□□ -2.01
VPS55YJR044C CCT7P42943 550 aaKnown RBP2.48□□□□□ -2.01
VPS55YJR044C SCS3P53012 380 aa2.48□□□□□ -2.01
VPS55YJR044C VPS16Q03308 798 aa2.48□□□□□ -2.01
VPS55YJR044C PKH1Q03407 766 aa2.48□□□□□ -2.01
VPS55YJR044C YML020WQ03722 664 aa2.48□□□□□ -2.01
VPS55YJR044C MRI1Q06489 411 aaKnown RBP2.48□□□□□ -2.01
VPS55YJR044C RPS9AO13516 197 aaKnown RBP2.47□□□□□ -2.01
VPS55YJR044C MPH2P0CD99 609 aa2.47□□□□□ -2.01
VPS55YJR044C BCD1P38772 366 aa2.47□□□□□ -2.01
VPS55YJR044C YJL206CP39529 758 aa2.47□□□□□ -2.01
VPS55YJR044C TOK1P40310 691 aa2.47□□□□□ -2.01
VPS55YJR044C YIR042CP40586 236 aa2.47□□□□□ -2.01
VPS55YJR044C AMA1P50082 593 aa2.47□□□□□ -2.01
VPS55YJR044C PUS2P53167 370 aa2.47□□□□□ -2.01
VPS55YJR044C BUL2Q03758 920 aaKnown RBP2.47□□□□□ -2.01
VPS55YJR044C NOP8Q08287 484 aaPredicted RBP2.47□□□□□ -2.01
VPS55YJR044C SGO1Q08490 590 aa2.47□□□□□ -2.01
VPS55YJR044C HAL9Q12180 1030 aa2.47□□□□□ -2.01
VPS55YJR044C CLN2P20438 545 aa2.46□□□□□ -2.02
VPS55YJR044C DMC1P25453 334 aa2.46□□□□□ -2.02
VPS55YJR044C GAT1P43574 510 aa2.46□□□□□ -2.02
VPS55YJR044C DAM1P53267 343 aa2.46□□□□□ -2.02
VPS55YJR044C DUS1P53759 423 aaKnown RBP2.46□□□□□ -2.02
VPS55YJR044C SSL2Q00578 843 aa2.46□□□□□ -2.02
VPS55YJR044C APM1Q00776 475 aaPredicted RBP2.46□□□□□ -2.02
VPS55YJR044C NRG1Q03125 231 aa2.46□□□□□ -2.02
VPS55YJR044C MUS81Q04149 632 aaPredicted RBP2.46□□□□□ -2.02
VPS55YJR044C TGL5Q12043 749 aa2.46□□□□□ -2.02
VPS55YJR044C ORC2P32833 620 aa2.45□□□□□ -2.02
VPS55YJR044C SAK1P38990 1142 aa2.45□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 18.4 ms