RNA–Protein interactions for RNA: YJL006C

CTK2, Transcript of Beta subunit of C-terminal domain kinase I (CTDK-I), yeastyeast

Gene CTK2, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CTK2YJL006C YIL108WP40483 696 aaKnown RBP5.64□□□□□ -1.51
CTK2YJL006C VPS16Q03308 798 aa5.64□□□□□ -1.51
CTK2YJL006C CTF13P35203 478 aa5.63□□□□□ -1.51
CTK2YJL006C CUE2P36075 443 aaKnown RBP5.63□□□□□ -1.51
CTK2YJL006C FRE5Q08908 694 aa5.63□□□□□ -1.51
CTK2YJL006C PIN2Q12057 282 aa5.63□□□□□ -1.51
CTK2YJL006C RFA1P22336 621 aaKnown RBP5.62□□□□□ -1.51
CTK2YJL006C PPS1P38148 807 aa5.62□□□□□ -1.51
CTK2YJL006C SWM1Q12379 170 aa5.62□□□□□ -1.51
CTK2YJL006C TRM11Q12463 433 aa5.62□□□□□ -1.51
CTK2YJL006C MET3P08536 511 aa5.61□□□□□ -1.51
CTK2YJL006C NAP1P25293 417 aaKnown RBP5.61□□□□□ -1.51
CTK2YJL006C MRP8P35719 219 aa5.61□□□□□ -1.51
CTK2YJL006C HBT1Q07653 1046 aaKnown RBP5.61□□□□□ -1.51
CTK2YJL006C TUB3P09734 445 aaKnown RBP5.6□□□□□ -1.51
CTK2YJL006C CTF8P38877 133 aa5.6□□□□□ -1.51
CTK2YJL006C ELO3P40319 345 aa5.6□□□□□ -1.51
CTK2YJL006C DLT1Q04216 342 aa5.6□□□□□ -1.51
CTK2YJL006C TYE7P33122 291 aaPredicted RBP5.59□□□□□ -1.51
CTK2YJL006C PBY1P38254 753 aa5.59□□□□□ -1.51
CTK2YJL006C SIT1P39980 628 aa5.59□□□□□ -1.51
CTK2YJL006C SDS3P40505 327 aa5.59□□□□□ -1.51
CTK2YJL006C CEP3P40969 608 aa5.59□□□□□ -1.51
CTK2YJL006C TPO2P53283 614 aa5.59□□□□□ -1.51
CTK2YJL006C ERT1P38140 529 aa5.58□□□□□ -1.52
CTK2YJL006C DAS1P47005 663 aa5.58□□□□□ -1.52
CTK2YJL006C CCM1P48237 864 aaPredicted RBP5.58□□□□□ -1.52
CTK2YJL006C YKR011CQ02209 353 aa5.58□□□□□ -1.52
CTK2YJL006C CAF20P12962 161 aaKnown RBP5.57□□□□□ -1.52
CTK2YJL006C YHL017WP38745 532 aa5.57□□□□□ -1.52
CTK2YJL006C HDA1P53973 706 aa5.57□□□□□ -1.52
CTK2YJL006C ADY4Q05955 493 aa5.57□□□□□ -1.52
CTK2YJL006C JIP5Q06214 492 aaPredicted RBP5.57□□□□□ -1.52
CTK2YJL006C RPP1P38786 293 aa5.56□□□□□ -1.52
CTK2YJL006C TOK1P40310 691 aa5.56□□□□□ -1.52
CTK2YJL006C FKH2P41813 862 aa5.56□□□□□ -1.52
CTK2YJL006C BUL2Q03758 920 aaKnown RBP5.56□□□□□ -1.52
CTK2YJL006C MRH1Q12117 320 aaPredicted RBP5.56□□□□□ -1.52
CTK2YJL006C IRR1P40541 1150 aa5.55□□□□□ -1.52
CTK2YJL006C MUP1P50276 574 aa5.55□□□□□ -1.52
CTK2YJL006C LCD1Q04377 747 aa5.55□□□□□ -1.52
CTK2YJL006C MSL5Q12186 476 aaKnown RBP RIP-Chip data5.55□□□□□ -1.52not detected
CTK2YJL006C YHR078WP38799 552 aa5.54□□□□□ -1.52
CTK2YJL006C URA1P28272 314 aaPredicted RBP5.53□□□□□ -1.52
CTK2YJL006C HBS1P32769 611 aaKnown RBP5.53□□□□□ -1.52
CTK2YJL006C REC104P33323 182 aa5.53□□□□□ -1.52
CTK2YJL006C SNM1P40993 198 aa5.53□□□□□ -1.52
CTK2YJL006C MRPS35P53292 345 aa5.53□□□□□ -1.52
CTK2YJL006C NDJ1Q12366 352 aa5.53□□□□□ -1.52
CTK2YJL006C RPS9AO13516 197 aaKnown RBP5.52□□□□□ -1.53
CTK2YJL006C PRP4P20053 465 aaKnown RBP5.52□□□□□ -1.53
CTK2YJL006C PEX2P32800 271 aa5.52□□□□□ -1.53
CTK2YJL006C STE5P32917 917 aa5.52□□□□□ -1.53
CTK2YJL006C VHR1P40522 640 aa5.52□□□□□ -1.53
CTK2YJL006C SVF1Q05515 481 aa5.52□□□□□ -1.53
CTK2YJL006C PRP9P19736 530 aaKnown RBP5.51□□□□□ -1.53
CTK2YJL006C PUS2P53167 370 aa5.51□□□□□ -1.53
CTK2YJL006C CRR1Q05790 422 aa5.51□□□□□ -1.53
CTK2YJL006C SUT2Q12286 268 aa5.51□□□□□ -1.53
CTK2YJL006C YPR071WQ12346 211 aa5.51□□□□□ -1.53
CTK2YJL006C SPF1P39986 1215 aaKnown RBP5.5□□□□□ -1.53
CTK2YJL006C YBR053CP38235 358 aa5.49□□□□□ -1.53
CTK2YJL006C YBR184WP38299 523 aa5.49□□□□□ -1.53
CTK2YJL006C TDP1P38319 544 aa5.49□□□□□ -1.53
CTK2YJL006C VAC8P39968 578 aa5.49□□□□□ -1.53
CTK2YJL006C ASI2P53895 289 aa5.49□□□□□ -1.53
CTK2YJL006C PKH1Q03407 766 aa5.49□□□□□ -1.53
CTK2YJL006C TDA5Q06417 326 aaKnown RBP5.49□□□□□ -1.53
CTK2YJL006C GFA1P14742 717 aaKnown RBP5.48□□□□□ -1.53
CTK2YJL006C YBR284WP38150 797 aa5.48□□□□□ -1.53
CTK2YJL006C PCL5P38794 229 aa5.48□□□□□ -1.53
CTK2YJL006C YJL163CP46996 555 aa5.48□□□□□ -1.53
CTK2YJL006C JSN1P47135 1091 aaKnown RBP RIP-Chip data5.48□□□□□ -1.53not detected
CTK2YJL006C CDC11P32458 415 aa5.47□□□□□ -1.53
CTK2YJL006C PPZ2P33329 710 aa5.47□□□□□ -1.53
CTK2YJL006C PFD1P46988 109 aa5.47□□□□□ -1.53
CTK2YJL006C AMA1P50082 593 aa5.47□□□□□ -1.53
CTK2YJL006C ALD6P54115 500 aaKnown RBP5.47□□□□□ -1.53
CTK2YJL006C MPH2P0CD99 609 aa5.46□□□□□ -1.54
CTK2YJL006C CDC43P18898 376 aa5.46□□□□□ -1.54
CTK2YJL006C CYS3P31373 394 aaKnown RBP5.46□□□□□ -1.54
CTK2YJL006C ALR2P43553 858 aa5.46□□□□□ -1.54
CTK2YJL006C DUS1P53759 423 aaKnown RBP5.46□□□□□ -1.54
CTK2YJL006C HAL9Q12180 1030 aa5.46□□□□□ -1.54
CTK2YJL006C BNR1P40450 1375 aa5.45□□□□□ -1.54
CTK2YJL006C NGG1P32494 702 aa5.45□□□□□ -1.54
CTK2YJL006C PZF1P39933 429 aa5.45□□□□□ -1.54
CTK2YJL006C TAH11P47112 604 aa5.45□□□□□ -1.54
CTK2YJL006C VPS73P53142 486 aaKnown RBP5.45□□□□□ -1.54
CTK2YJL006C SCT1P32784 759 aa5.44□□□□□ -1.54
CTK2YJL006C RIA1P53893 1110 aa5.44□□□□□ -1.54
CTK2YJL006C MUS81Q04149 632 aaPredicted RBP5.44□□□□□ -1.54
CTK2YJL006C FMP25Q08023 583 aa5.44□□□□□ -1.54
CTK2YJL006C ENV7Q12003 364 aa5.44□□□□□ -1.54
CTK2YJL006C HCA4P20448 770 aaKnown RBP5.43□□□□□ -1.54
CTK2YJL006C KIN3P22209 435 aa5.43□□□□□ -1.54
CTK2YJL006C RIX1P38883 763 aaPredicted RBP5.43□□□□□ -1.54
CTK2YJL006C SAK1P38990 1142 aa5.43□□□□□ -1.54
CTK2YJL006C SNU71P53207 620 aaKnown RBP5.43□□□□□ -1.54
CTK2YJL006C NRG1Q03125 231 aa5.43□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 50.9 ms