RNA–Protein interactions for RNA: YIL061C

SNP1, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNP1, Length 903 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNP1YIL061C YKL023WP36103 277 aaKnown RBP8.27□□□□□ -1.09
SNP1YIL061C JNM1P36224 373 aa8.27□□□□□ -1.09
SNP1YIL061C KIC1P38692 1080 aa8.27□□□□□ -1.09
SNP1YIL061C VPS29P38759 282 aa8.27□□□□□ -1.09
SNP1YIL061C YMR124WP39523 943 aaKnown RBP8.27□□□□□ -1.09
SNP1YIL061C YGR021WP53212 290 aa8.27□□□□□ -1.09
SNP1YIL061C TAM41P53230 385 aa8.27□□□□□ -1.09
SNP1YIL061C ROD1Q02805 837 aa8.27□□□□□ -1.09
SNP1YIL061C CDC53Q12018 815 aaKnown RBP8.27□□□□□ -1.09
SNP1YIL061C ERG11P10614 530 aa8.26□□□□□ -1.09
SNP1YIL061C COT1P32798 439 aa8.26□□□□□ -1.09
SNP1YIL061C SEC8P32855 1065 aa8.26□□□□□ -1.09
SNP1YIL061C TVP38P36164 337 aa8.26□□□□□ -1.09
SNP1YIL061C REG2P38232 338 aa8.26□□□□□ -1.09
SNP1YIL061C ERC1P38767 581 aa8.26□□□□□ -1.09
SNP1YIL061C YIL089WP40500 205 aa8.26□□□□□ -1.09
SNP1YIL061C UBP15P50101 1230 aa8.26□□□□□ -1.09
SNP1YIL061C SYH1Q02875 849 aaKnown RBP8.26□□□□□ -1.09
SNP1YIL061C NOP6Q07623 225 aaKnown RBP8.26□□□□□ -1.09
SNP1YIL061C CFT2Q12102 859 aaPredicted RBP8.26□□□□□ -1.09
SNP1YIL061C YKL068W-AQ3E826 78 aa8.26□□□□□ -1.09
SNP1YIL061C PKC1P24583 1151 aa8.25□□□□□ -1.09
SNP1YIL061C KIP1P28742 1111 aa8.25□□□□□ -1.09
SNP1YIL061C RAD54P32863 898 aa8.25□□□□□ -1.09
SNP1YIL061C VPS35P34110 944 aa8.25□□□□□ -1.09
SNP1YIL061C ATG19P35193 415 aa8.25□□□□□ -1.09
SNP1YIL061C DBP7P36120 742 aaKnown RBP8.25□□□□□ -1.09
SNP1YIL061C TDA3P38758 523 aa8.25□□□□□ -1.09
SNP1YIL061C MAD1P40957 749 aa8.25□□□□□ -1.09
SNP1YIL061C MVP1P40959 511 aaKnown RBP8.25□□□□□ -1.09
SNP1YIL061C KAP114P53067 1004 aa8.25□□□□□ -1.09
SNP1YIL061C ENV11P53246 860 aa8.25□□□□□ -1.09
SNP1YIL061C UBP3Q01477 912 aaKnown RBP RIP-Chip data8.25□□□□□ -1.09not detected
SNP1YIL061C SMC5Q08204 1093 aa8.25□□□□□ -1.09
SNP1YIL061C NUR1Q12066 484 aa8.25□□□□□ -1.09
SNP1YIL061C EUG1P32474 517 aa8.24□□□□□ -1.09
SNP1YIL061C GCG1P32656 232 aaKnown RBP8.24□□□□□ -1.09
SNP1YIL061C PCS60P38137 543 aaKnown RBP RIP-Chip data8.24□□□□□ -1.09not detected
SNP1YIL061C VPS70P47161 811 aa8.24□□□□□ -1.09
SNP1YIL061C YMR114CQ04471 368 aaKnown RBP8.24□□□□□ -1.09
SNP1YIL061C UTP14Q04500 899 aaKnown RBP8.24□□□□□ -1.09
SNP1YIL061C NCR1Q12200 1170 aa8.24□□□□□ -1.09
SNP1YIL061C YDL206WQ12424 762 aa8.24□□□□□ -1.09
SNP1YIL061C DED1P06634 604 aaKnown RBP8.23□□□□□ -1.09
SNP1YIL061C SNF1P06782 633 aaKnown RBP8.23□□□□□ -1.09
SNP1YIL061C GFA1P14742 717 aaKnown RBP8.23□□□□□ -1.09
SNP1YIL061C CDC48P25694 835 aaKnown RBP8.23□□□□□ -1.09
SNP1YIL061C MUD1P32605 298 aaKnown RBP8.23□□□□□ -1.09
SNP1YIL061C NFU1P32860 256 aa8.23□□□□□ -1.09
SNP1YIL061C MUD2P36084 527 aaKnown RBP8.23□□□□□ -1.09
SNP1YIL061C BCH2P36122 765 aa8.23□□□□□ -1.09
SNP1YIL061C TRZ1P36159 838 aaPredicted RBP8.23□□□□□ -1.09
SNP1YIL061C RCK2P38623 610 aa8.23□□□□□ -1.09
SNP1YIL061C YEL025CP39991 1188 aa8.23□□□□□ -1.09
SNP1YIL061C VPS53P47061 822 aa8.23□□□□□ -1.09
SNP1YIL061C AVT1P47082 602 aa8.23□□□□□ -1.09
SNP1YIL061C RTT102P53330 157 aa8.23□□□□□ -1.09
SNP1YIL061C CWC22P53333 577 aaKnown RBP8.23□□□□□ -1.09
SNP1YIL061C VTI1Q04338 217 aa8.23□□□□□ -1.09
SNP1YIL061C YMR321CQ04898 105 aa8.23□□□□□ -1.09
SNP1YIL061C COQ9Q05779 260 aa8.23□□□□□ -1.09
SNP1YIL061C NOC3Q07896 663 aaPredicted RBP8.23□□□□□ -1.09
SNP1YIL061C IES4Q08561 116 aa8.23□□□□□ -1.09
SNP1YIL061C CDC8P00572 216 aa8.22□□□□□ -1.09
SNP1YIL061C SEC21P32074 935 aaKnown RBP8.22□□□□□ -1.09
SNP1YIL061C BLI1P35727 113 aa8.22□□□□□ -1.09
SNP1YIL061C NPP2P39997 493 aa8.22□□□□□ -1.09
SNP1YIL061C SGM1P47166 707 aa8.22□□□□□ -1.09
SNP1YIL061C VTC3Q02725 835 aa8.22□□□□□ -1.09
SNP1YIL061C DIG1Q03063 452 aaKnown RBP8.22□□□□□ -1.09
SNP1YIL061C SLD5Q03406 294 aa8.22□□□□□ -1.09
SNP1YIL061C YMR018WQ04364 514 aa8.22□□□□□ -1.09
SNP1YIL061C YML082WQ04533 649 aaKnown RBP8.22□□□□□ -1.09
SNP1YIL061C SVF1Q05515 481 aa8.22□□□□□ -1.09
SNP1YIL061C VMA1P17255 1071 aaKnown RBP8.21□□□□□ -1.1
SNP1YIL061C SSD1P24276 1250 aaKnown RBP RIP-Chip data8.21□□□□□ -1.1not detected
SNP1YIL061C MSH1P25846 959 aa8.21□□□□□ -1.1
SNP1YIL061C RME1P32338 300 aaKnown RBP8.21□□□□□ -1.1
SNP1YIL061C TFC4P33339 1025 aa8.21□□□□□ -1.1
SNP1YIL061C IXR1P33417 597 aa8.21□□□□□ -1.1
SNP1YIL061C YKL050CP35736 922 aa8.21□□□□□ -1.1
SNP1YIL061C MIC19P43594 170 aa8.21□□□□□ -1.1
SNP1YIL061C MDR1P53258 950 aa8.21□□□□□ -1.1
SNP1YIL061C DUS4Q06063 367 aa8.21□□□□□ -1.1
SNP1YIL061C SLX4Q12098 748 aa8.21□□□□□ -1.1
SNP1YIL061C CDC11P32458 415 aa8.2□□□□□ -1.1
SNP1YIL061C EXO5P38289 585 aa8.2□□□□□ -1.1
SNP1YIL061C PEX21P50091 288 aa8.2□□□□□ -1.1
SNP1YIL061C SHE10P53075 577 aa8.2□□□□□ -1.1
SNP1YIL061C URH1Q04179 340 aa8.2□□□□□ -1.1
SNP1YIL061C ECI1Q05871 280 aa8.2□□□□□ -1.1
SNP1YIL061C TOM1Q03280 3268 aa8.19□□□□□ -1.1
SNP1YIL061C CDC33P07260 213 aaKnown RBP8.19□□□□□ -1.1
SNP1YIL061C SCJ1P25303 377 aa8.19□□□□□ -1.1
SNP1YIL061C EFT1P32324 842 aaKnown RBP8.19□□□□□ -1.1
SNP1YIL061C DPH2P32461 534 aa8.19□□□□□ -1.1
SNP1YIL061C PIN4P34217 668 aaKnown RBP RIP-Chip data8.19□□□□□ -1.1not detected
SNP1YIL061C PSY2P40164 858 aa8.19□□□□□ -1.1
SNP1YIL061C HSH155P49955 971 aaKnown RBP8.19□□□□□ -1.1
SNP1YIL061C YNL146WP53906 100 aa8.19□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 40.6 ms