RNA–Protein interactions for RNA: YHR040W

BCD1, Essential protein required for the accumulation of box C/D snoRNA, yeastyeast

Gene BCD1, Length 1,101 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BCD1YHR040W LCD1Q04377 747 aa3.91□□□□□ -1.78
BCD1YHR040W NTG2Q08214 380 aa3.91□□□□□ -1.78
BCD1YHR040W MCA1Q08601 432 aa3.91□□□□□ -1.78
BCD1YHR040W TMA46Q12000 345 aaKnown RBP3.91□□□□□ -1.78
BCD1YHR040W BUG1Q12191 341 aa3.91□□□□□ -1.78
BCD1YHR040W RRI2Q12348 645 aa3.91□□□□□ -1.78
BCD1YHR040W TY1A-NL1Q12391 440 aaKnown RBP3.91□□□□□ -1.78
BCD1YHR040W CAN1P04817 590 aa3.9□□□□□ -1.79
BCD1YHR040W ERR1P0CX10 437 aa3.9□□□□□ -1.79
BCD1YHR040W ERR2P0CX11 437 aa3.9□□□□□ -1.79
BCD1YHR040W RPL8AP17076 256 aaKnown RBP3.9□□□□□ -1.79
BCD1YHR040W HSP60P19882 572 aaKnown RBP3.9□□□□□ -1.79
BCD1YHR040W AGP1P25376 633 aa3.9□□□□□ -1.79
BCD1YHR040W RPL8BP29453 256 aaKnown RBP3.9□□□□□ -1.79
BCD1YHR040W APL2P36000 726 aaPredicted RBP3.9□□□□□ -1.79
BCD1YHR040W YKR075CP36155 307 aa3.9□□□□□ -1.79
BCD1YHR040W REI1P38344 393 aaPredicted RBP3.9□□□□□ -1.79
BCD1YHR040W YHL017WP38745 532 aa3.9□□□□□ -1.79
BCD1YHR040W LSB3P43603 459 aaKnown RBP3.9□□□□□ -1.79
BCD1YHR040W YKE2P52553 114 aa3.9□□□□□ -1.79
BCD1YHR040W ARI1P53111 347 aaKnown RBP3.9□□□□□ -1.79
BCD1YHR040W YGL082WP53155 381 aa3.9□□□□□ -1.79
BCD1YHR040W PEX8P53248 589 aa3.9□□□□□ -1.79
BCD1YHR040W MRPS35P53292 345 aa3.9□□□□□ -1.79
BCD1YHR040W HXT17P53631 564 aa3.9□□□□□ -1.79
BCD1YHR040W FOL1P53848 824 aa3.9□□□□□ -1.79
BCD1YHR040W ARP5P53946 755 aa3.9□□□□□ -1.79
BCD1YHR040W ALO1P54783 526 aaKnown RBP3.9□□□□□ -1.79
BCD1YHR040W EEB1Q02891 456 aa3.9□□□□□ -1.79
BCD1YHR040W SHE9Q04172 456 aa3.9□□□□□ -1.79
BCD1YHR040W VPS20Q04272 221 aa3.9□□□□□ -1.79
BCD1YHR040W ESC2Q06340 456 aa3.9□□□□□ -1.79
BCD1YHR040W YOR223WQ12015 292 aa3.9□□□□□ -1.79
BCD1YHR040W PSF3Q12146 194 aa3.9□□□□□ -1.79
BCD1YHR040W NKP1Q12493 238 aa3.9□□□□□ -1.79
BCD1YHR040W YPR117WQ06116 2489 aa3.9□□□□□ -1.79
BCD1YHR040W ADR1P07248 1323 aa3.9□□□□□ -1.79
BCD1YHR040W CIT1P00890 479 aa3.89□□□□□ -1.79
BCD1YHR040W THS1P04801 734 aaKnown RBP3.89□□□□□ -1.79
BCD1YHR040W GCR1P07261 785 aa3.89□□□□□ -1.79
BCD1YHR040W BAS1P22035 811 aa3.89□□□□□ -1.79
BCD1YHR040W MSH3P25336 1018 aa3.89□□□□□ -1.79
BCD1YHR040W COQ2P32378 372 aa3.89□□□□□ -1.79
BCD1YHR040W SFP1P32432 683 aa3.89□□□□□ -1.79
BCD1YHR040W ELM1P32801 640 aa3.89□□□□□ -1.79
BCD1YHR040W STE5P32917 917 aa3.89□□□□□ -1.79
BCD1YHR040W SKI2P35207 1287 aaKnown RBP RIP-Chip data3.89□□□□□ -1.79not detected
BCD1YHR040W MRP8P35719 219 aa3.89□□□□□ -1.79
BCD1YHR040W FUI1P38196 639 aa3.89□□□□□ -1.79
BCD1YHR040W YBR184WP38299 523 aa3.89□□□□□ -1.79
BCD1YHR040W PEX28P38848 579 aa3.89□□□□□ -1.79
BCD1YHR040W PIC2P40035 300 aa3.89□□□□□ -1.79
BCD1YHR040W ERP6P53198 216 aa3.89□□□□□ -1.79
BCD1YHR040W YPL034WQ03083 165 aa3.89□□□□□ -1.79
BCD1YHR040W UGO1Q03327 502 aa3.89□□□□□ -1.79
BCD1YHR040W HRQ1Q05549 1077 aa3.89□□□□□ -1.79
BCD1YHR040W FMP25Q08023 583 aa3.89□□□□□ -1.79
BCD1YHR040W AVO1Q08236 1176 aa3.89□□□□□ -1.79
BCD1YHR040W YIL177CP40434 1758 aa3.89□□□□□ -1.79
BCD1YHR040W YJL225CP40889 1758 aa3.89□□□□□ -1.79
BCD1YHR040W CYB2P00175 591 aa3.88□□□□□ -1.79
BCD1YHR040W ATP4P05626 244 aa3.88□□□□□ -1.79
BCD1YHR040W TY1A-LR4P0C2I8 440 aaKnown RBP3.88□□□□□ -1.79
BCD1YHR040W TY1A-DR6P0CX70 440 aa3.88□□□□□ -1.79
BCD1YHR040W TY1A-ER1P0CX71 440 aa3.88□□□□□ -1.79
BCD1YHR040W TY1A-LR2P0CX72 440 aa3.88□□□□□ -1.79
BCD1YHR040W TY1A-PLP0CX73 440 aa3.88□□□□□ -1.79
BCD1YHR040W TY1A-JR1P0CX74 440 aa3.88□□□□□ -1.79
BCD1YHR040W TY1A-LR3P0CX75 440 aa3.88□□□□□ -1.79
BCD1YHR040W TY1A-ML2P0CX76 440 aa3.88□□□□□ -1.79
BCD1YHR040W SEC18P18759 758 aaKnown RBP3.88□□□□□ -1.79
BCD1YHR040W PEP3P27801 918 aa3.88□□□□□ -1.79
BCD1YHR040W SBA1P28707 216 aaKnown RBP3.88□□□□□ -1.79
BCD1YHR040W RPN12P32496 274 aa3.88□□□□□ -1.79
BCD1YHR040W PRX1P34227 261 aaKnown RBP3.88□□□□□ -1.79
BCD1YHR040W CAB3P36076 571 aa3.88□□□□□ -1.79
BCD1YHR040W MIC60P36112 540 aa3.88□□□□□ -1.79
BCD1YHR040W EXO5P38289 585 aa3.88□□□□□ -1.79
BCD1YHR040W AKR1P39010 764 aa3.88□□□□□ -1.79
BCD1YHR040W CCT5P40413 562 aaKnown RBP3.88□□□□□ -1.79
BCD1YHR040W IRR1P40541 1150 aa3.88□□□□□ -1.79
BCD1YHR040W CCT8P47079 568 aaKnown RBP3.88□□□□□ -1.79
BCD1YHR040W NPA3P47122 385 aa3.88□□□□□ -1.79
BCD1YHR040W GNP1P48813 663 aa3.88□□□□□ -1.79
BCD1YHR040W NCE103P53615 221 aa3.88□□□□□ -1.79
BCD1YHR040W NOG1Q02892 647 aaKnown RBP3.88□□□□□ -1.79
BCD1YHR040W DOT1Q04089 582 aaKnown RBP3.88□□□□□ -1.79
BCD1YHR040W UBX2Q04228 584 aa3.88□□□□□ -1.79
BCD1YHR040W YOR378WQ08902 515 aa3.88□□□□□ -1.79
BCD1YHR040W ALG6Q12001 544 aaKnown RBP3.88□□□□□ -1.79
BCD1YHR040W TY1A-GR1Q12085 440 aa3.88□□□□□ -1.79
BCD1YHR040W REC8Q12188 680 aa3.88□□□□□ -1.79
BCD1YHR040W NYV1Q12255 253 aa3.88□□□□□ -1.79
BCD1YHR040W TMA7Q3E764 64 aaKnown RBP3.88□□□□□ -1.79
BCD1YHR040W TY1A-PR3Q6Q5H1 440 aaKnown RBP3.88□□□□□ -1.79
BCD1YHR040W TY1A-OLQ92392 440 aaKnown RBP3.88□□□□□ -1.79
BCD1YHR040W POM152P39685 1337 aa3.88□□□□□ -1.79
BCD1YHR040W RPL22AP05749 121 aaKnown RBP3.87□□□□□ -1.79
BCD1YHR040W MATALPHA2P0CY08 210 aa3.87□□□□□ -1.79
BCD1YHR040W HMLALPHA2P0CY09 210 aa3.87□□□□□ -1.79
Retrieved 100 of 5,963 RNA–protein pairs in 98.1 ms