RNA–Protein interactions for RNA: YGR038C-B

YGR038C-B, Transcript of Retrotransposon TYA Gag and TYB Pol genes, yeastyeast

Gene YGR038C-B, Length 5,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YGR038C-BYGR038C-B PEP5P12868 1029 aa2.82□□□□□ -1.96
YGR038C-BYGR038C-B TOA1P32773 286 aa2.82□□□□□ -1.96
YGR038C-BYGR038C-B BCH2P36122 765 aa2.82□□□□□ -1.96
YGR038C-BYGR038C-B YEL025CP39991 1188 aa2.82□□□□□ -1.96
YGR038C-BYGR038C-B FIR1P40020 876 aa2.82□□□□□ -1.96
YGR038C-BYGR038C-B CHS6P40955 746 aa2.82□□□□□ -1.96
YGR038C-BYGR038C-B PUS5Q06244 254 aa2.82□□□□□ -1.96
YGR038C-BYGR038C-B EMG1Q06287 252 aaKnown RBP2.82□□□□□ -1.96
YGR038C-BYGR038C-B RTK1Q12100 620 aaPredicted RBP2.82□□□□□ -1.96
YGR038C-BYGR038C-B RAD59Q12223 238 aa2.82□□□□□ -1.96
YGR038C-BYGR038C-B VTH1P40438 1549 aa2.82□□□□□ -1.96
YGR038C-BYGR038C-B VTH2P40890 1549 aa2.82□□□□□ -1.96
YGR038C-BYGR038C-B COX3P00420 269 aa2.81□□□□□ -1.96
YGR038C-BYGR038C-B MSS116P15424 664 aaKnown RBP2.81□□□□□ -1.96
YGR038C-BYGR038C-B THR4P16120 514 aaKnown RBP2.81□□□□□ -1.96
YGR038C-BYGR038C-B GID7P25569 745 aa2.81□□□□□ -1.96
YGR038C-BYGR038C-B CYM1P32898 989 aa2.81□□□□□ -1.96
YGR038C-BYGR038C-B COY1P34237 679 aa2.81□□□□□ -1.96
YGR038C-BYGR038C-B XDJ1P39102 459 aa2.81□□□□□ -1.96
YGR038C-BYGR038C-B YIL089WP40500 205 aa2.81□□□□□ -1.96
YGR038C-BYGR038C-B HUL4P40985 892 aa2.81□□□□□ -1.96
YGR038C-BYGR038C-B UFE1P41834 346 aa2.81□□□□□ -1.96
YGR038C-BYGR038C-B ARH1P48360 493 aa2.81□□□□□ -1.96
YGR038C-BYGR038C-B SAM37P50110 327 aa2.81□□□□□ -1.96
YGR038C-BYGR038C-B ASE1P50275 885 aa2.81□□□□□ -1.96
YGR038C-BYGR038C-B YPL034WQ03083 165 aa2.81□□□□□ -1.96
YGR038C-BYGR038C-B GIS4Q04233 774 aa2.81□□□□□ -1.96
YGR038C-BYGR038C-B GAD1Q04792 585 aa2.81□□□□□ -1.96
YGR038C-BYGR038C-B OMS1Q06668 471 aa2.81□□□□□ -1.96
YGR038C-BYGR038C-B RAD61Q99359 647 aa2.81□□□□□ -1.96
YGR038C-BYGR038C-B GFA1P14742 717 aaKnown RBP2.81□□□□□ -1.96
YGR038C-BYGR038C-B HCA4P20448 770 aaKnown RBP2.81□□□□□ -1.96
YGR038C-BYGR038C-B MSH3P25336 1018 aa2.81□□□□□ -1.96
YGR038C-BYGR038C-B NOP4P37838 685 aaKnown RBP2.81□□□□□ -1.96
YGR038C-BYGR038C-B YHR078WP38799 552 aa2.81□□□□□ -1.96
YGR038C-BYGR038C-B HAL5P38970 855 aaKnown RBP2.81□□□□□ -1.96
YGR038C-BYGR038C-B EAF6P47128 113 aa2.81□□□□□ -1.96
YGR038C-BYGR038C-B HFM1P51979 1187 aa2.81□□□□□ -1.96
YGR038C-BYGR038C-B VPS4P52917 437 aa2.81□□□□□ -1.96
YGR038C-BYGR038C-B LAG2Q92325 660 aa2.81□□□□□ -1.96
YGR038C-BYGR038C-B ATE1P16639 503 aa2.81□□□□□ -1.96
YGR038C-BYGR038C-B PUF4P25339 888 aaKnown RBP RIP-Chip data2.81□□□□□ -1.96not detected
YGR038C-BYGR038C-B GAC1P28006 793 aa2.81□□□□□ -1.96
YGR038C-BYGR038C-B CRM1P30822 1084 aaKnown RBP2.81□□□□□ -1.96
YGR038C-BYGR038C-B SRB4P32569 687 aa2.81□□□□□ -1.96
YGR038C-BYGR038C-B ASH1P34233 588 aa2.81□□□□□ -1.96
YGR038C-BYGR038C-B PTK1P36002 662 aaPredicted RBP2.81□□□□□ -1.96
YGR038C-BYGR038C-B DRE2P36152 348 aa2.81□□□□□ -1.96
YGR038C-BYGR038C-B YHR045WP38775 560 aa2.81□□□□□ -1.96
YGR038C-BYGR038C-B BEM4P39011 633 aa2.81□□□□□ -1.96
YGR038C-BYGR038C-B GDH3P39708 457 aa2.81□□□□□ -1.96
YGR038C-BYGR038C-B SLX8P40072 274 aa2.81□□□□□ -1.96
YGR038C-BYGR038C-B DAK2P43550 591 aa2.81□□□□□ -1.96
YGR038C-BYGR038C-B RPT4P53549 437 aaKnown RBP2.81□□□□□ -1.96
YGR038C-BYGR038C-B GPD1Q00055 391 aaKnown RBP2.81□□□□□ -1.96
YGR038C-BYGR038C-B MDM38Q08179 573 aa2.81□□□□□ -1.96
YGR038C-BYGR038C-B YOL057WQ08225 711 aa2.81□□□□□ -1.96
YGR038C-BYGR038C-B TAH18Q12181 623 aa2.81□□□□□ -1.96
YGR038C-BYGR038C-B COX17Q12287 69 aa2.81□□□□□ -1.96
YGR038C-BYGR038C-B RAV1P47104 1357 aa2.81□□□□□ -1.96
YGR038C-BYGR038C-B BCK1Q01389 1478 aa2.81□□□□□ -1.96
YGR038C-BYGR038C-B GCD11P32481 527 aaKnown RBP2.81□□□□□ -1.96
YGR038C-BYGR038C-B MKT1P40850 830 aaKnown RBP2.81□□□□□ -1.96
YGR038C-BYGR038C-B SET2P46995 733 aaKnown RBP2.81□□□□□ -1.96
YGR038C-BYGR038C-B YJR030CP47101 745 aa2.81□□□□□ -1.96
YGR038C-BYGR038C-B CUL3P53202 744 aa2.81□□□□□ -1.96
YGR038C-BYGR038C-B YTP1P53584 459 aa2.81□□□□□ -1.96
YGR038C-BYGR038C-B FOL1P53848 824 aa2.81□□□□□ -1.96
YGR038C-BYGR038C-B NCS2P53923 493 aaPredicted RBP2.81□□□□□ -1.96
YGR038C-BYGR038C-B PRP38Q00723 242 aaPredicted RBP2.81□□□□□ -1.96
YGR038C-BYGR038C-B YMR102CQ03177 834 aa2.81□□□□□ -1.96
YGR038C-BYGR038C-B YMR178WQ03219 274 aaKnown RBP2.81□□□□□ -1.96
YGR038C-BYGR038C-B YKL033W-AQ86ZR7 236 aa2.81□□□□□ -1.96
YGR038C-BYGR038C-B YLR278CQ05854 1341 aa2.8□□□□□ -1.96
YGR038C-BYGR038C-B PGK1P00560 416 aaKnown RBP2.8□□□□□ -1.96
YGR038C-BYGR038C-B STE6P12866 1290 aa2.8□□□□□ -1.96
YGR038C-BYGR038C-B MAK11P20484 414 aaKnown RBP2.8□□□□□ -1.96
YGR038C-BYGR038C-B PRE10P21242 288 aaKnown RBP RIP-Chip data2.8□□□□□ -1.96not detected
YGR038C-BYGR038C-B PCM1P38628 557 aaKnown RBP2.8□□□□□ -1.96
YGR038C-BYGR038C-B YEL020CP39994 560 aa2.8□□□□□ -1.96
YGR038C-BYGR038C-B BIM1P40013 344 aa2.8□□□□□ -1.96
YGR038C-BYGR038C-B VID28P40547 921 aa2.8□□□□□ -1.96
YGR038C-BYGR038C-B VPS9P54787 451 aa2.8□□□□□ -1.96
YGR038C-BYGR038C-B THI3Q07471 609 aa2.8□□□□□ -1.96
YGR038C-BYGR038C-B MRN1Q08925 612 aaKnown RBP RIP-Chip data2.8□□□□□ -1.96not detected
YGR038C-BYGR038C-B YDR061WQ12298 539 aa2.8□□□□□ -1.96
YGR038C-BYGR038C-B MDM20Q12387 796 aaKnown RBP2.8□□□□□ -1.96
YGR038C-BYGR038C-B IRC20Q06554 1556 aa2.8□□□□□ -1.96
YGR038C-BYGR038C-B SCP160P06105 1222 aaKnown RBP RIP-Chip data2.8□□□□□ -1.96not detected
YGR038C-BYGR038C-B TCP1P12612 559 aaKnown RBP2.8□□□□□ -1.96
YGR038C-BYGR038C-B SAC7P17121 654 aa2.8□□□□□ -1.96
YGR038C-BYGR038C-B ROX1P25042 368 aa2.8□□□□□ -1.96
YGR038C-BYGR038C-B BRF1P29056 596 aa2.8□□□□□ -1.96
YGR038C-BYGR038C-B HIS7P33734 552 aaKnown RBP2.8□□□□□ -1.96
YGR038C-BYGR038C-B KAP104P38217 918 aaKnown RBP2.8□□□□□ -1.96
YGR038C-BYGR038C-B RGD2P43556 714 aa2.8□□□□□ -1.96
YGR038C-BYGR038C-B DAK1P54838 584 aaKnown RBP2.8□□□□□ -1.96
YGR038C-BYGR038C-B RSC3Q06639 885 aa2.8□□□□□ -1.96
YGR038C-BYGR038C-B CDA1Q06702 301 aa2.8□□□□□ -1.96
YGR038C-BYGR038C-B CRD1Q07560 283 aa2.8□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 20.2 ms