RNA–Protein interactions for RNA: YGR006W

PRP18, Transcript of Splicing factor and component of snRNP U5, yeastyeast

Gene PRP18, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP18YGR006W SPE1P08432 466 aa5.07□□□□□ -1.6
PRP18YGR006W MEF1P25039 761 aa5.07□□□□□ -1.6
PRP18YGR006W TYE7P33122 291 aaPredicted RBP5.07□□□□□ -1.6
PRP18YGR006W STO1P34160 861 aaKnown RBP5.07□□□□□ -1.6
PRP18YGR006W CEP3P40969 608 aa5.07□□□□□ -1.6
PRP18YGR006W AVT1P47082 602 aa5.07□□□□□ -1.6
PRP18YGR006W YJR142WP47173 342 aa5.07□□□□□ -1.6
PRP18YGR006W YKR011CQ02209 353 aa5.07□□□□□ -1.6
PRP18YGR006W TFB2Q02939 513 aa5.07□□□□□ -1.6
PRP18YGR006W ROT1Q03691 256 aa5.07□□□□□ -1.6
PRP18YGR006W RSC3Q06639 885 aa5.07□□□□□ -1.6
PRP18YGR006W CDC9P04819 755 aa5.06□□□□□ -1.6
PRP18YGR006W RPL8AP17076 256 aaKnown RBP5.06□□□□□ -1.6
PRP18YGR006W DAL7P21826 554 aa5.06□□□□□ -1.6
PRP18YGR006W CYS3P31373 394 aaKnown RBP5.06□□□□□ -1.6
PRP18YGR006W YEL1P34225 687 aa5.06□□□□□ -1.6
PRP18YGR006W MEF2P39677 819 aa5.06□□□□□ -1.6
PRP18YGR006W CAF16P43569 289 aa5.06□□□□□ -1.6
PRP18YGR006W ZDS1P50111 915 aaKnown RBP5.06□□□□□ -1.6
PRP18YGR006W TAD1P53065 400 aa5.06□□□□□ -1.6
PRP18YGR006W HDA1P53973 706 aa5.06□□□□□ -1.6
PRP18YGR006W DNM1P54861 757 aa5.06□□□□□ -1.6
PRP18YGR006W PLB2Q03674 706 aa5.06□□□□□ -1.6
PRP18YGR006W ADY3Q07732 790 aa5.06□□□□□ -1.6
PRP18YGR006W TPO1Q07824 586 aa5.06□□□□□ -1.6
PRP18YGR006W ADR1P07248 1323 aa5.05□□□□□ -1.6
PRP18YGR006W SRD1P09007 221 aa5.05□□□□□ -1.6
PRP18YGR006W TY4A-JP47023 414 aa5.05□□□□□ -1.6
PRP18YGR006W PUS2P53167 370 aa5.05□□□□□ -1.6
PRP18YGR006W GTF1P53260 183 aaPredicted RBP5.05□□□□□ -1.6
PRP18YGR006W YNL193WP53870 558 aa5.05□□□□□ -1.6
PRP18YGR006W COG8Q04632 607 aa5.05□□□□□ -1.6
PRP18YGR006W RXT3Q07458 294 aa5.05□□□□□ -1.6
PRP18YGR006W SEG2P34250 1132 aa5.04□□□□□ -1.6
PRP18YGR006W SAP190P36123 1033 aa5.04□□□□□ -1.6
PRP18YGR006W YIL108WP40483 696 aaKnown RBP5.04□□□□□ -1.6
PRP18YGR006W RLP7P40693 322 aaKnown RBP5.04□□□□□ -1.6
PRP18YGR006W MET12P46151 657 aa5.04□□□□□ -1.6
PRP18YGR006W PRP43P53131 767 aaKnown RBP5.04□□□□□ -1.6
PRP18YGR006W GCN5Q03330 439 aa5.04□□□□□ -1.6
PRP18YGR006W DUS4Q06063 367 aa5.04□□□□□ -1.6
PRP18YGR006W GPB1Q08886 897 aa5.04□□□□□ -1.6
PRP18YGR006W GAS1P22146 559 aaKnown RBP5.03□□□□□ -1.6
PRP18YGR006W PER1P25625 357 aa5.03□□□□□ -1.6
PRP18YGR006W RPD3P32561 433 aa5.03□□□□□ -1.6
PRP18YGR006W TSA1P34760 196 aaKnown RBP5.03□□□□□ -1.6
PRP18YGR006W MCD4P36051 919 aa5.03□□□□□ -1.6
PRP18YGR006W RPN10P38886 268 aaKnown RBP5.03□□□□□ -1.6
PRP18YGR006W SET5P38890 526 aaKnown RBP5.03□□□□□ -1.6
PRP18YGR006W NIT1P40447 199 aa5.03□□□□□ -1.6
PRP18YGR006W URM1P40554 99 aaPredicted RBP5.03□□□□□ -1.6
PRP18YGR006W ALY2P47029 1046 aa5.03□□□□□ -1.6
PRP18YGR006W VPS62P53285 467 aa5.03□□□□□ -1.6
PRP18YGR006W SNP1Q00916 300 aaPredicted RBP5.03□□□□□ -1.6
PRP18YGR006W YDR132CQ03900 495 aa5.03□□□□□ -1.6
PRP18YGR006W LRS4Q04087 347 aaKnown RBP5.03□□□□□ -1.6
PRP18YGR006W HMI1Q12039 706 aa5.03□□□□□ -1.6
PRP18YGR006W DIF1O13577 133 aa5.02□□□□□ -1.61
PRP18YGR006W PRC1P00729 532 aa5.02□□□□□ -1.61
PRP18YGR006W RPS13P05756 151 aaKnown RBP5.02□□□□□ -1.61
PRP18YGR006W HIS5P07172 385 aa5.02□□□□□ -1.61
PRP18YGR006W FBP1P09201 348 aa5.02□□□□□ -1.61
PRP18YGR006W CRP1P38845 465 aaKnown RBP5.02□□□□□ -1.61
PRP18YGR006W SHR5P41912 237 aa5.02□□□□□ -1.61
PRP18YGR006W HLJ1P48353 224 aa5.02□□□□□ -1.61
PRP18YGR006W GCV2P49095 1034 aa5.02□□□□□ -1.61
PRP18YGR006W RIM8P53179 542 aa5.02□□□□□ -1.61
PRP18YGR006W SSL1Q04673 461 aaPredicted RBP5.02□□□□□ -1.61
PRP18YGR006W ACK1Q07622 623 aaPredicted RBP5.02□□□□□ -1.61
PRP18YGR006W YLR001CQ07895 862 aa5.02□□□□□ -1.61
PRP18YGR006W NOP12Q08208 459 aaKnown RBP5.02□□□□□ -1.61
PRP18YGR006W YBR182C-AQ8TGU6 64 aa5.02□□□□□ -1.61
PRP18YGR006W SOD2P00447 233 aa5.01□□□□□ -1.61
PRP18YGR006W CDC6P09119 513 aa5.01□□□□□ -1.61
PRP18YGR006W RAD18P10862 487 aa5.01□□□□□ -1.61
PRP18YGR006W YCL002CP25565 263 aa5.01□□□□□ -1.61
PRP18YGR006W EMC1P25574 760 aa5.01□□□□□ -1.61
PRP18YGR006W HOG1P32485 435 aa5.01□□□□□ -1.61
PRP18YGR006W CHA4P43634 648 aa5.01□□□□□ -1.61
PRP18YGR006W HXT16P47185 567 aa5.01□□□□□ -1.61
PRP18YGR006W SPT20P50875 604 aa5.01□□□□□ -1.61
PRP18YGR006W SDA1P53313 767 aaKnown RBP5.01□□□□□ -1.61
PRP18YGR006W CDA2Q06703 312 aa5.01□□□□□ -1.61
PRP18YGR006W YPL277CQ08989 487 aa5.01□□□□□ -1.61
PRP18YGR006W YOR022CQ12204 715 aa5.01□□□□□ -1.61
PRP18YGR006W SED4P25365 1065 aa5□□□□□ -1.61
PRP18YGR006W PCL2P25693 308 aa5□□□□□ -1.61
PRP18YGR006W CDC20P26309 610 aa5□□□□□ -1.61
PRP18YGR006W AIM3P38266 947 aaKnown RBP5□□□□□ -1.61
PRP18YGR006W CTF8P38877 133 aa5□□□□□ -1.61
PRP18YGR006W SDP1P40479 209 aa5□□□□□ -1.61
PRP18YGR006W PMT3P47190 753 aa5□□□□□ -1.61
PRP18YGR006W YNR029CP53729 429 aaKnown RBP5□□□□□ -1.61
PRP18YGR006W DUS1P53759 423 aaKnown RBP5□□□□□ -1.61
PRP18YGR006W THI21Q08975 551 aa5□□□□□ -1.61
PRP18YGR006W HAL9Q12180 1030 aa5□□□□□ -1.61
PRP18YGR006W SFL1P20134 766 aa4.99□□□□□ -1.61
PRP18YGR006W RNQ1P25367 405 aa4.99□□□□□ -1.61
PRP18YGR006W YAP6Q03935 383 aa4.99□□□□□ -1.61
PRP18YGR006W NHX1Q04121 633 aa4.99□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 34.5 ms