RNA–Protein interactions for RNA: YGL028C

SCW11, Transcript of Cell wall protein with similarity to glucanases, yeast

Gene SCW11, Length 1,629 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCW11	YGL028C	TDP1	P38319	544 aa		2.75	□□□□□ -1.97
SCW11	YGL028C	TSL1	P38427	1098 aa	Known RBP	2.75	□□□□□ -1.97
SCW11	YGL028C	SSL1	Q04673	461 aa	Predicted RBP	2.75	□□□□□ -1.97
SCW11	YGL028C	PEX19	Q07418	342 aa		2.75	□□□□□ -1.97
SCW11	YGL028C	ADE8	P04161	214 aa		2.74	□□□□□ -1.97
SCW11	YGL028C	MAD1	P40957	749 aa		2.74	□□□□□ -1.97
SCW11	YGL028C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	2.74	□□□□□ -1.97	not detected
SCW11	YGL028C	SLU7	Q02775	382 aa	Known RBP	2.74	□□□□□ -1.97
SCW11	YGL028C	VPS30	Q02948	557 aa		2.74	□□□□□ -1.97
SCW11	YGL028C	CLN2	P20438	545 aa		2.73	□□□□□ -1.97
SCW11	YGL028C	PRI2	P20457	528 aa		2.73	□□□□□ -1.97
SCW11	YGL028C	NPP1	P25353	742 aa		2.73	□□□□□ -1.97
SCW11	YGL028C	AAR2	P32357	355 aa	Predicted RBP	2.73	□□□□□ -1.97
SCW11	YGL028C	STE13	P33894	931 aa		2.73	□□□□□ -1.97
SCW11	YGL028C	FLO10	P36170	1169 aa		2.73	□□□□□ -1.97
SCW11	YGL028C	YRO2	P38079	344 aa		2.73	□□□□□ -1.97
SCW11	YGL028C	THI7	Q05998	598 aa		2.73	□□□□□ -1.97
SCW11	YGL028C	SEC21	P32074	935 aa	Known RBP	2.72	□□□□□ -1.97
SCW11	YGL028C	RPD3	P32561	433 aa		2.72	□□□□□ -1.97
SCW11	YGL028C	PPS1	P38148	807 aa		2.72	□□□□□ -1.97
SCW11	YGL028C	YHL017W	P38745	532 aa		2.72	□□□□□ -1.97
SCW11	YGL028C	YIL108W	P40483	696 aa	Known RBP	2.72	□□□□□ -1.97
SCW11	YGL028C	DAS1	P47005	663 aa		2.72	□□□□□ -1.97
SCW11	YGL028C	ERG5	P54781	538 aa		2.72	□□□□□ -1.97
SCW11	YGL028C	SHE9	Q04172	456 aa		2.72	□□□□□ -1.97
SCW11	YGL028C	OPI10	Q08202	246 aa		2.72	□□□□□ -1.97
SCW11	YGL028C	HCA4	P20448	770 aa	Known RBP	2.71	□□□□□ -1.97
SCW11	YGL028C	RFA1	P22336	621 aa	Known RBP	2.71	□□□□□ -1.97
SCW11	YGL028C	YKE2	P52553	114 aa		2.71	□□□□□ -1.97
SCW11	YGL028C	SCS3	P53012	380 aa		2.71	□□□□□ -1.97
SCW11	YGL028C	ILV6	P25605	309 aa	Known RBP	2.71	□□□□□ -1.98
SCW11	YGL028C	CTF13	P35203	478 aa		2.71	□□□□□ -1.98
SCW11	YGL028C	YKL069W	P36088	180 aa		2.71	□□□□□ -1.98
SCW11	YGL028C	YBR238C	P38330	731 aa	Known RBP	2.71	□□□□□ -1.98
SCW11	YGL028C	SDP1	P40479	209 aa		2.71	□□□□□ -1.98
SCW11	YGL028C	TAH11	P47112	604 aa		2.71	□□□□□ -1.98
SCW11	YGL028C	VPS16	Q03308	798 aa		2.71	□□□□□ -1.98
SCW11	YGL028C	FRE5	Q08908	694 aa		2.71	□□□□□ -1.98
SCW11	YGL028C	PIN2	Q12057	282 aa		2.71	□□□□□ -1.98
SCW11	YGL028C	SWM1	Q12379	170 aa		2.71	□□□□□ -1.98
SCW11	YGL028C	MET3	P08536	511 aa		2.7	□□□□□ -1.98
SCW11	YGL028C	FBP1	P09201	348 aa		2.7	□□□□□ -1.98
SCW11	YGL028C	AFR1	P33304	620 aa		2.7	□□□□□ -1.98
SCW11	YGL028C	CEP3	P40969	608 aa		2.7	□□□□□ -1.98
SCW11	YGL028C	DLT1	Q04216	342 aa		2.7	□□□□□ -1.98
SCW11	YGL028C	JIP5	Q06214	492 aa	Predicted RBP	2.7	□□□□□ -1.98
SCW11	YGL028C	TRM11	Q12463	433 aa		2.7	□□□□□ -1.98
SCW11	YGL028C	NAP1	P25293	417 aa	Known RBP	2.69	□□□□□ -1.98
SCW11	YGL028C	MRP8	P35719	219 aa		2.69	□□□□□ -1.98
SCW11	YGL028C	ELO3	P40319	345 aa		2.69	□□□□□ -1.98
SCW11	YGL028C	VPS73	P53142	486 aa	Known RBP	2.69	□□□□□ -1.98
SCW11	YGL028C	TPO2	P53283	614 aa		2.69	□□□□□ -1.98
SCW11	YGL028C	MET6	P05694	767 aa	Known RBP	2.68	□□□□□ -1.98
SCW11	YGL028C	CAF20	P12962	161 aa	Known RBP	2.68	□□□□□ -1.98
SCW11	YGL028C	TYE7	P33122	291 aa	Predicted RBP	2.68	□□□□□ -1.98
SCW11	YGL028C	ERT1	P38140	529 aa		2.68	□□□□□ -1.98
SCW11	YGL028C	PBY1	P38254	753 aa		2.68	□□□□□ -1.98
SCW11	YGL028C	FKH2	P41813	862 aa		2.68	□□□□□ -1.98
SCW11	YGL028C	CCM1	P48237	864 aa	Predicted RBP	2.68	□□□□□ -1.98
SCW11	YGL028C	YKR011C	Q02209	353 aa		2.68	□□□□□ -1.98
SCW11	YGL028C	ARO10	Q06408	635 aa		2.68	□□□□□ -1.98
SCW11	YGL028C	TUB3	P09734	445 aa	Known RBP	2.68	□□□□□ -1.98
SCW11	YGL028C	CDC43	P18898	376 aa		2.68	□□□□□ -1.98
SCW11	YGL028C	RPP1	P38786	293 aa		2.68	□□□□□ -1.98
SCW11	YGL028C	CTF8	P38877	133 aa		2.68	□□□□□ -1.98
SCW11	YGL028C	MUP1	P50276	574 aa		2.68	□□□□□ -1.98
SCW11	YGL028C	HDA1	P53973	706 aa		2.68	□□□□□ -1.98
SCW11	YGL028C	RPS9A	O13516	197 aa	Known RBP	2.67	□□□□□ -1.98
SCW11	YGL028C	YHR078W	P38799	552 aa		2.67	□□□□□ -1.98
SCW11	YGL028C	SIT1	P39980	628 aa		2.67	□□□□□ -1.98
SCW11	YGL028C	TOK1	P40310	691 aa		2.67	□□□□□ -1.98
SCW11	YGL028C	IRR1	P40541	1150 aa		2.67	□□□□□ -1.98
SCW11	YGL028C	PUS2	P53167	370 aa		2.67	□□□□□ -1.98
SCW11	YGL028C	LCD1	Q04377	747 aa		2.67	□□□□□ -1.98
SCW11	YGL028C	CRR1	Q05790	422 aa		2.67	□□□□□ -1.98
SCW11	YGL028C	ADY4	Q05955	493 aa		2.67	□□□□□ -1.98
SCW11	YGL028C	URA1	P28272	314 aa	Predicted RBP	2.66	□□□□□ -1.98
SCW11	YGL028C	REC104	P33323	182 aa		2.66	□□□□□ -1.98
SCW11	YGL028C	VHR1	P40522	640 aa		2.66	□□□□□ -1.98
SCW11	YGL028C	YPR071W	Q12346	211 aa		2.66	□□□□□ -1.98
SCW11	YGL028C	KIN3	P22209	435 aa		2.65	□□□□□ -1.98
SCW11	YGL028C	ADY2	P25613	283 aa		2.65	□□□□□ -1.98
SCW11	YGL028C	HBS1	P32769	611 aa	Known RBP	2.65	□□□□□ -1.98
SCW11	YGL028C	YBR284W	P38150	797 aa		2.65	□□□□□ -1.98
SCW11	YGL028C	VAC8	P39968	578 aa		2.65	□□□□□ -1.98
SCW11	YGL028C	YIL166C	P40445	542 aa		2.65	□□□□□ -1.98
SCW11	YGL028C	MRPS35	P53292	345 aa		2.65	□□□□□ -1.98
SCW11	YGL028C	BUL2	Q03758	920 aa	Known RBP	2.65	□□□□□ -1.98
SCW11	YGL028C	PRP9	P19736	530 aa	Known RBP	2.64	□□□□□ -1.99
SCW11	YGL028C	PRP4	P20053	465 aa	Known RBP	2.64	□□□□□ -1.99
SCW11	YGL028C	STE5	P32917	917 aa		2.64	□□□□□ -1.99
SCW11	YGL028C	YBR184W	P38299	523 aa		2.64	□□□□□ -1.99
SCW11	YGL028C	PCL5	P38794	229 aa		2.64	□□□□□ -1.99
SCW11	YGL028C	PKH1	Q03407	766 aa		2.64	□□□□□ -1.99
SCW11	YGL028C	SVF1	Q05515	481 aa		2.64	□□□□□ -1.99
SCW11	YGL028C	TDA5	Q06417	326 aa	Known RBP	2.64	□□□□□ -1.99
SCW11	YGL028C	YUR1	P26725	428 aa		2.64	□□□□□ -1.99
SCW11	YGL028C	CYS3	P31373	394 aa	Known RBP	2.64	□□□□□ -1.99
SCW11	YGL028C	SPF1	P39986	1215 aa	Known RBP	2.64	□□□□□ -1.99
SCW11	YGL028C	ALR2	P43553	858 aa		2.64	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 14.7 ms