RNA–Protein interactions for RNA: YBR079C

RPG1, Transcript of eIF3a subunit of the eukaryotic translation initiation factor 3 (eIF3), yeast

Gene RPG1, Length 2,895 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPG1	YBR079C	TUS1	Q06412	1307 aa		4.55	□□□□□ -1.68
RPG1	YBR079C	SRV2	P17555	526 aa	Known RBP	4.55	□□□□□ -1.68
RPG1	YBR079C	PEX2	P32800	271 aa		4.55	□□□□□ -1.68
RPG1	YBR079C	BLI1	P35727	113 aa		4.55	□□□□□ -1.68
RPG1	YBR079C	TOS1	P38288	455 aa		4.55	□□□□□ -1.68
RPG1	YBR079C	EXO5	P38289	585 aa		4.55	□□□□□ -1.68
RPG1	YBR079C	YMR1	P47147	688 aa	Known RBP RIP-Chip data	4.55	□□□□□ -1.68	not detected
RPG1	YBR079C	ZIP2	P53061	704 aa		4.55	□□□□□ -1.68
RPG1	YBR079C	DOS2	P54858	310 aa		4.55	□□□□□ -1.68
RPG1	YBR079C	TDA9	Q04545	1251 aa		4.55	□□□□□ -1.68
RPG1	YBR079C	YLR297W	Q05899	129 aa		4.55	□□□□□ -1.68
RPG1	YBR079C	ALR1	Q08269	859 aa		4.55	□□□□□ -1.68
RPG1	YBR079C	NCA2	Q12374	616 aa		4.55	□□□□□ -1.68
RPG1	YBR079C	SWI6	P09959	803 aa		4.55	□□□□□ -1.68
RPG1	YBR079C	CHS2	P14180	963 aa		4.55	□□□□□ -1.68
RPG1	YBR079C	SPT5	P27692	1063 aa	Known RBP	4.55	□□□□□ -1.68
RPG1	YBR079C	YKU70	P32807	602 aa		4.55	□□□□□ -1.68
RPG1	YBR079C	PTC3	P34221	468 aa	Known RBP	4.55	□□□□□ -1.68
RPG1	YBR079C	PGM2	P37012	569 aa	Known RBP	4.55	□□□□□ -1.68
RPG1	YBR079C	FZO1	P38297	855 aa		4.55	□□□□□ -1.68
RPG1	YBR079C	TMA22	P47089	198 aa	Predicted RBP	4.55	□□□□□ -1.68
RPG1	YBR079C	ILM1	P47155	203 aa		4.55	□□□□□ -1.68
RPG1	YBR079C	MFM1	Q02783	413 aa		4.55	□□□□□ -1.68
RPG1	YBR079C	YMR187C	Q03236	431 aa		4.55	□□□□□ -1.68
RPG1	YBR079C	YMR018W	Q04364	514 aa		4.55	□□□□□ -1.68
RPG1	YBR079C	TSR1	Q07381	788 aa	Known RBP	4.55	□□□□□ -1.68
RPG1	YBR079C	YPL277C	Q08989	487 aa		4.55	□□□□□ -1.68
RPG1	YBR079C	LAP2	Q10740	671 aa		4.55	□□□□□ -1.68
RPG1	YBR079C	FIG2	P25653	1609 aa		4.54	□□□□□ -1.68
RPG1	YBR079C	RPB2	P08518	1224 aa	Known RBP	4.54	□□□□□ -1.68
RPG1	YBR079C	YMR085W	P0CF18	432 aa		4.54	□□□□□ -1.68
RPG1	YBR079C	CLN3	P13365	580 aa		4.54	□□□□□ -1.68
RPG1	YBR079C	CBF2	P32504	956 aa		4.54	□□□□□ -1.68
RPG1	YBR079C	NCL1	P38205	684 aa	Known RBP	4.54	□□□□□ -1.68
RPG1	YBR079C	TIF4631	P39935	952 aa	Known RBP	4.54	□□□□□ -1.68
RPG1	YBR079C	INA22	P40576	216 aa		4.54	□□□□□ -1.68
RPG1	YBR079C	TDA10	P42938	290 aa		4.54	□□□□□ -1.68
RPG1	YBR079C	UBP6	P43593	499 aa	Known RBP	4.54	□□□□□ -1.68
RPG1	YBR079C	LSB1	P53281	241 aa		4.54	□□□□□ -1.68
RPG1	YBR079C	NCS2	P53923	493 aa	Predicted RBP	4.54	□□□□□ -1.68
RPG1	YBR079C	VPS72	Q03388	795 aa		4.54	□□□□□ -1.68
RPG1	YBR079C	NOB1	Q08444	459 aa	Known RBP	4.54	□□□□□ -1.68
RPG1	YBR079C	OSW1	Q08692	278 aa		4.54	□□□□□ -1.68
RPG1	YBR079C	TAF10	Q12030	206 aa		4.54	□□□□□ -1.68
RPG1	YBR079C	TY4A-H	Q6Q5P6	413 aa		4.54	□□□□□ -1.68
RPG1	YBR079C	FLO11	P08640	1367 aa		4.54	□□□□□ -1.68
RPG1	YBR079C	ADH4	P10127	382 aa		4.54	□□□□□ -1.68
RPG1	YBR079C	SEC14	P24280	304 aa	Known RBP	4.54	□□□□□ -1.68
RPG1	YBR079C	MLS1	P30952	554 aa		4.54	□□□□□ -1.68
RPG1	YBR079C	PLC1	P32383	869 aa		4.54	□□□□□ -1.68
RPG1	YBR079C	YME2	P32843	850 aa		4.54	□□□□□ -1.68
RPG1	YBR079C	TRZ1	P36159	838 aa	Predicted RBP	4.54	□□□□□ -1.68
RPG1	YBR079C	PAN5	P38787	379 aa		4.54	□□□□□ -1.68
RPG1	YBR079C	NUP82	P40368	713 aa		4.54	□□□□□ -1.68
RPG1	YBR079C	HXT8	P40886	569 aa		4.54	□□□□□ -1.68
RPG1	YBR079C	FMS1	P50264	508 aa		4.54	□□□□□ -1.68
RPG1	YBR079C	SUB1	P54000	292 aa	Known RBP	4.54	□□□□□ -1.68
RPG1	YBR079C	CEF1	Q03654	590 aa	Predicted RBP	4.54	□□□□□ -1.68
RPG1	YBR079C	DPL1	Q05567	589 aa		4.54	□□□□□ -1.68
RPG1	YBR079C	SKG3	Q06315	1026 aa		4.54	□□□□□ -1.68
RPG1	YBR079C	SLX4	Q12098	748 aa		4.54	□□□□□ -1.68
RPG1	YBR079C	CBF1	P17106	351 aa		4.53	□□□□□ -1.68
RPG1	YBR079C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
RPG1	YBR079C	MVD1	P32377	396 aa	Known RBP	4.53	□□□□□ -1.68
RPG1	YBR079C	RAD5	P32849	1169 aa	Predicted RBP	4.53	□□□□□ -1.68
RPG1	YBR079C	STE13	P33894	931 aa		4.53	□□□□□ -1.68
RPG1	YBR079C	MSG5	P38590	489 aa		4.53	□□□□□ -1.68
RPG1	YBR079C	RIO2	P40160	425 aa	Known RBP	4.53	□□□□□ -1.68
RPG1	YBR079C	YNL144C	P53907	740 aa		4.53	□□□□□ -1.68
RPG1	YBR079C	ORC4	P54791	529 aa		4.53	□□□□□ -1.68
RPG1	YBR079C	SPC24	Q04477	213 aa		4.53	□□□□□ -1.68
RPG1	YBR079C	ARP6	Q12509	438 aa		4.53	□□□□□ -1.68
RPG1	YBR079C	SRO9	P25567	434 aa	Known RBP	4.53	□□□□□ -1.68
RPG1	YBR079C	CDC11	P32458	415 aa		4.53	□□□□□ -1.68
RPG1	YBR079C	SSE1	P32589	693 aa	Known RBP	4.53	□□□□□ -1.68
RPG1	YBR079C	YBL028C	P38202	106 aa		4.53	□□□□□ -1.68
RPG1	YBR079C	VHC1	P38329	1120 aa		4.53	□□□□□ -1.68
RPG1	YBR079C	ERC1	P38767	581 aa		4.53	□□□□□ -1.68
RPG1	YBR079C	SAK1	P38990	1142 aa		4.53	□□□□□ -1.68
RPG1	YBR079C	SDS3	P40505	327 aa		4.53	□□□□□ -1.68
RPG1	YBR079C	LCB2	P40970	561 aa		4.53	□□□□□ -1.68
RPG1	YBR079C	ROG3	P43602	733 aa		4.53	□□□□□ -1.68
RPG1	YBR079C	ERP6	P53198	216 aa		4.53	□□□□□ -1.68
RPG1	YBR079C	ARK1	P53974	638 aa		4.53	□□□□□ -1.68
RPG1	YBR079C	BET4	Q00618	327 aa		4.53	□□□□□ -1.68
RPG1	YBR079C	EEB1	Q02891	456 aa		4.53	□□□□□ -1.68
RPG1	YBR079C	SPO19	Q03029	223 aa		4.53	□□□□□ -1.68
RPG1	YBR079C	VPS16	Q03308	798 aa		4.53	□□□□□ -1.68
RPG1	YBR079C	GNT1	Q12096	491 aa		4.53	□□□□□ -1.68
RPG1	YBR079C	NCR1	Q12200	1170 aa		4.53	□□□□□ -1.68
RPG1	YBR079C	SPO16	P17122	198 aa		4.52	□□□□□ -1.69
RPG1	YBR079C	IME1	P21190	360 aa		4.52	□□□□□ -1.69
RPG1	YBR079C	UBP1	P25037	809 aa		4.52	□□□□□ -1.69
RPG1	YBR079C	EFB1	P32471	206 aa	Known RBP	4.52	□□□□□ -1.69
RPG1	YBR079C	AFG2	P32794	780 aa		4.52	□□□□□ -1.69
RPG1	YBR079C	YME1	P32795	747 aa		4.52	□□□□□ -1.69
RPG1	YBR079C	PFF1	P38244	976 aa		4.52	□□□□□ -1.69
RPG1	YBR079C	END3	P39013	349 aa		4.52	□□□□□ -1.69
RPG1	YBR079C	RPN3	P40016	523 aa	Known RBP	4.52	□□□□□ -1.69
RPG1	YBR079C	SYH1	Q02875	849 aa	Known RBP	4.52	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 306.5 ms