RNA–Protein interactions for RNA: snR52

snR52, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR52, Length 92 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR52snR52 RPT1P33299 467 aaKnown RBP2.47□□□□□ -2.01
snR52snR52 CCC2P38995 1004 aa2.47□□□□□ -2.01
snR52snR52 PSP2P50109 593 aaKnown RBP2.47□□□□□ -2.01
snR52snR52 SRT1Q03175 343 aa2.47□□□□□ -2.01
snR52snR52 YMR206WQ03695 313 aa2.47□□□□□ -2.01
snR52snR52 MRL1Q06815 381 aa2.47□□□□□ -2.01
snR52snR52 MDM38Q08179 573 aa2.47□□□□□ -2.01
snR52snR52 MRH1Q12117 320 aaPredicted RBP2.47□□□□□ -2.01
snR52snR52 GCR1P07261 785 aa2.46□□□□□ -2.02
snR52snR52 RAD2P07276 1031 aa2.46□□□□□ -2.02
snR52snR52 NPP2P39997 493 aa2.46□□□□□ -2.02
snR52snR52 HRQ1Q05549 1077 aa2.46□□□□□ -2.02
snR52snR52 HBT1Q07653 1046 aaKnown RBP2.46□□□□□ -2.02
snR52snR52 TUB1P09733 447 aaKnown RBP2.45□□□□□ -2.02
snR52snR52 CYC8P14922 966 aa2.45□□□□□ -2.02
snR52snR52 YHL017WP38745 532 aa2.45□□□□□ -2.02
snR52snR52 RIX1P38883 763 aaPredicted RBP2.45□□□□□ -2.02
snR52snR52 TAH11P47112 604 aa2.45□□□□□ -2.02
snR52snR52 MSC6Q08818 692 aaKnown RBP2.45□□□□□ -2.02
snR52snR52 YPL066WQ12194 479 aa2.45□□□□□ -2.02
snR52snR52 MCM7P38132 845 aa2.44□□□□□ -2.02
snR52snR52 RLF2Q12495 606 aa2.44□□□□□ -2.02
snR52snR52 CAD1P24813 409 aaKnown RBP2.43□□□□□ -2.02
snR52snR52 YUR1P26725 428 aa2.43□□□□□ -2.02
snR52snR52 RPC82P32349 654 aa2.43□□□□□ -2.02
snR52snR52 PPS1P38148 807 aa2.43□□□□□ -2.02
snR52snR52 TDP1P38319 544 aa2.43□□□□□ -2.02
snR52snR52 SSF1P38789 453 aaPredicted RBP2.43□□□□□ -2.02
snR52snR52 DAS1P47005 663 aa2.43□□□□□ -2.02
snR52snR52 ARO10Q06408 635 aa2.43□□□□□ -2.02
snR52snR52 SPP382Q06411 708 aaPredicted RBP2.43□□□□□ -2.02
snR52snR52 FBP1P09201 348 aa2.42□□□□□ -2.02
snR52snR52 GFA1P14742 717 aaKnown RBP2.42□□□□□ -2.02
snR52snR52 VPS73P53142 486 aaKnown RBP2.42□□□□□ -2.02
snR52snR52 ADY4Q05955 493 aa2.42□□□□□ -2.02
snR52snR52 FRE5Q08908 694 aa2.42□□□□□ -2.02
snR52snR52 ADY2P25613 283 aa2.41□□□□□ -2.02
snR52snR52 PPZ2P33329 710 aa2.41□□□□□ -2.02
snR52snR52 CTF13P35203 478 aa2.41□□□□□ -2.02
snR52snR52 GEF1P37020 779 aa2.41□□□□□ -2.02
snR52snR52 STM1P39015 273 aaKnown RBP2.41□□□□□ -2.02
snR52snR52 GLO1P50107 326 aa2.41□□□□□ -2.02
snR52snR52 SED4P25365 1065 aa2.4□□□□□ -2.03
snR52snR52 SEC21P32074 935 aaKnown RBP2.4□□□□□ -2.03
snR52snR52 LYP1P32487 611 aa2.4□□□□□ -2.03
snR52snR52 DUT1P33317 147 aa2.4□□□□□ -2.03
snR52snR52 YBR238CP38330 731 aaKnown RBP2.4□□□□□ -2.03
snR52snR52 THI7Q05998 598 aa2.4□□□□□ -2.03
snR52snR52 RKM4Q12504 494 aa2.4□□□□□ -2.03
snR52snR52 TUB3P09734 445 aaKnown RBP2.39□□□□□ -2.03
snR52snR52 ELO3P40319 345 aa2.39□□□□□ -2.03
snR52snR52 SFB2P53953 876 aa2.39□□□□□ -2.03
snR52snR52 SEC5P89102 971 aa2.39□□□□□ -2.03
snR52snR52 RTT10Q08924 1013 aa2.39□□□□□ -2.03
snR52snR52 TRP2P00899 507 aaKnown RBP2.38□□□□□ -2.03
snR52snR52 HCA4P20448 770 aaKnown RBP2.38□□□□□ -2.03
snR52snR52 CDC12P32468 407 aaKnown RBP2.38□□□□□ -2.03
snR52snR52 RPS26AP39938 119 aaKnown RBP2.38□□□□□ -2.03
snR52snR52 RPS26BP39939 119 aaKnown RBP2.38□□□□□ -2.03
snR52snR52 YIL166CP40445 542 aa2.38□□□□□ -2.03
snR52snR52 TMA46Q12000 345 aaKnown RBP2.38□□□□□ -2.03
snR52snR52 MET6P05694 767 aaKnown RBP2.37□□□□□ -2.03
snR52snR52 MET3P08536 511 aa2.37□□□□□ -2.03
snR52snR52 YBR053CP38235 358 aa2.37□□□□□ -2.03
snR52snR52 GYP7P48365 746 aa2.37□□□□□ -2.03
snR52snR52 YKE2P52553 114 aa2.37□□□□□ -2.03
snR52snR52 RAI1P53063 387 aaKnown RBP2.37□□□□□ -2.03
snR52snR52 PUS2P53167 370 aa2.37□□□□□ -2.03
snR52snR52 EEB1Q02891 456 aa2.37□□□□□ -2.03
snR52snR52 TRM11Q12463 433 aa2.37□□□□□ -2.03
snR52snR52 INO1P11986 533 aa2.36□□□□□ -2.03
snR52snR52 RAD27P26793 382 aa2.36□□□□□ -2.03
snR52snR52 YKR078WP36158 585 aaKnown RBP2.36□□□□□ -2.03
snR52snR52 NAB6Q03735 1134 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
snR52snR52 DLT1Q04216 342 aa2.36□□□□□ -2.03
snR52snR52 PEX19Q07418 342 aa2.36□□□□□ -2.03
snR52snR52 SEC20P28791 383 aa2.35□□□□□ -2.03
snR52snR52 CTF8P38877 133 aa2.35□□□□□ -2.03
snR52snR52 SDP1P40479 209 aa2.35□□□□□ -2.03
snR52snR52 SCS3P53012 380 aa2.35□□□□□ -2.03
snR52snR52 CAF20P12962 161 aaKnown RBP2.34□□□□□ -2.03
snR52snR52 RGT1P32862 1170 aa2.34□□□□□ -2.03
snR52snR52 YKL107WP34251 309 aa2.34□□□□□ -2.03
snR52snR52 THI12P42883 340 aa2.34□□□□□ -2.03
snR52snR52 THI5P43534 340 aa2.34□□□□□ -2.03
snR52snR52 YGL176CP46945 554 aa2.34□□□□□ -2.03
snR52snR52 YJL163CP46996 555 aa2.34□□□□□ -2.03
snR52snR52 THI11P47183 340 aa2.34□□□□□ -2.03
snR52snR52 MRPS35P53292 345 aa2.34□□□□□ -2.03
snR52snR52 RIA1P53893 1110 aa2.34□□□□□ -2.03
snR52snR52 THI13Q07748 340 aa2.34□□□□□ -2.03
snR52snR52 TAF3Q12297 353 aa2.34□□□□□ -2.03
snR52snR52 PRP4P20053 465 aaKnown RBP2.33□□□□□ -2.04
snR52snR52 MCM2P29469 868 aa2.33□□□□□ -2.04
snR52snR52 MOT2P34909 587 aaKnown RBP2.33□□□□□ -2.04
snR52snR52 TSL1P38427 1098 aaKnown RBP2.33□□□□□ -2.04
snR52snR52 PCL5P38794 229 aa2.33□□□□□ -2.04
snR52snR52 YJR107WP47145 328 aa2.33□□□□□ -2.04
snR52snR52 MUP1P50276 574 aa2.33□□□□□ -2.04
snR52snR52 TYW3P53177 273 aa2.33□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 36.5 ms