RNA–Protein interactions for RNA: YOR106W

VAM3, Transcript of Syntaxin-like vacuolar t-SNARE, yeastyeast

Gene VAM3, Length 852 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VAM3YOR106W VPS62P53285 467 aa6.73□□□□□ -1.33
VAM3YOR106W SPO75Q07798 868 aa6.73□□□□□ -1.33
VAM3YOR106W HSF1P10961 833 aa6.72□□□□□ -1.33
VAM3YOR106W RPC82P32349 654 aa6.72□□□□□ -1.33
VAM3YOR106W SCT1P32784 759 aa6.72□□□□□ -1.33
VAM3YOR106W CCC2P38995 1004 aa6.72□□□□□ -1.33
VAM3YOR106W GYP7P48365 746 aa6.72□□□□□ -1.33
VAM3YOR106W NOP12Q08208 459 aaKnown RBP6.72□□□□□ -1.33
VAM3YOR106W YKR078WP36158 585 aaKnown RBP6.71□□□□□ -1.34
VAM3YOR106W YRO2P38079 344 aa6.71□□□□□ -1.34
VAM3YOR106W MPT5P39016 859 aaKnown RBP RIP-Chip data6.71□□□□□ -1.34not detected
VAM3YOR106W SFB2P53953 876 aa6.71□□□□□ -1.34
VAM3YOR106W CDA1Q06702 301 aa6.71□□□□□ -1.34
VAM3YOR106W SIT1P39980 628 aa6.7□□□□□ -1.34
VAM3YOR106W NPP2P39997 493 aa6.7□□□□□ -1.34
VAM3YOR106W ALR2P43553 858 aa6.7□□□□□ -1.34
VAM3YOR106W MET12P46151 657 aa6.7□□□□□ -1.34
VAM3YOR106W ERP6P53198 216 aa6.7□□□□□ -1.34
VAM3YOR106W TMA10Q06177 86 aa6.7□□□□□ -1.34
VAM3YOR106W ADY3Q07732 790 aa6.7□□□□□ -1.34
VAM3YOR106W FMP25Q08023 583 aa6.7□□□□□ -1.34
VAM3YOR106W OSH2Q12451 1283 aa6.7□□□□□ -1.34
VAM3YOR106W SPE1P08432 466 aa6.69□□□□□ -1.34
VAM3YOR106W CDC48P25694 835 aaKnown RBP6.69□□□□□ -1.34
VAM3YOR106W CTS1P29029 562 aa6.69□□□□□ -1.34
VAM3YOR106W CDC11P32458 415 aa6.69□□□□□ -1.34
VAM3YOR106W TSL1P38427 1098 aaKnown RBP6.69□□□□□ -1.34
VAM3YOR106W PFD1P46988 109 aa6.69□□□□□ -1.34
VAM3YOR106W YLR224WQ05947 369 aa6.69□□□□□ -1.34
VAM3YOR106W EAF1Q06337 982 aa6.69□□□□□ -1.34
VAM3YOR106W HIS5P07172 385 aa6.68□□□□□ -1.34
VAM3YOR106W RAD4P14736 754 aa6.68□□□□□ -1.34
VAM3YOR106W STE11P23561 717 aa6.68□□□□□ -1.34
VAM3YOR106W SHM2P37291 469 aaKnown RBP6.68□□□□□ -1.34
VAM3YOR106W YJL049WP47048 450 aa6.68□□□□□ -1.34
VAM3YOR106W RPL8BP29453 256 aaKnown RBP6.67□□□□□ -1.34
VAM3YOR106W LST4P34239 828 aa6.67□□□□□ -1.34
VAM3YOR106W MCM6P53091 1017 aaKnown RBP6.67□□□□□ -1.34
VAM3YOR106W NPP1P25353 742 aa6.66□□□□□ -1.34
VAM3YOR106W ARE1P25628 610 aa6.66□□□□□ -1.34
VAM3YOR106W HBS1P32769 611 aaKnown RBP6.66□□□□□ -1.34
VAM3YOR106W ATG19P35193 415 aa6.66□□□□□ -1.34
VAM3YOR106W TIM54P47045 478 aa6.66□□□□□ -1.34
VAM3YOR106W CCM1P48237 864 aaPredicted RBP6.66□□□□□ -1.34
VAM3YOR106W MNN10P50108 393 aaKnown RBP6.66□□□□□ -1.34
VAM3YOR106W UTP8P53276 713 aaKnown RBP6.66□□□□□ -1.34
VAM3YOR106W LCD1Q04377 747 aa6.66□□□□□ -1.34
VAM3YOR106W UBX5Q06682 500 aa6.66□□□□□ -1.34
VAM3YOR106W PLB1P39105 664 aa6.65□□□□□ -1.34
VAM3YOR106W RAI1P53063 387 aaKnown RBP6.65□□□□□ -1.34
VAM3YOR106W AFR1P33304 620 aa6.64□□□□□ -1.35
VAM3YOR106W HSP60P19882 572 aaKnown RBP6.63□□□□□ -1.35
VAM3YOR106W YBR284WP38150 797 aa6.63□□□□□ -1.35
VAM3YOR106W VPS30Q02948 557 aa6.63□□□□□ -1.35
VAM3YOR106W NOT3P06102 836 aaKnown RBP6.62□□□□□ -1.35
VAM3YOR106W YBR238CP38330 731 aaKnown RBP6.62□□□□□ -1.35
VAM3YOR106W CHA4P43634 648 aa6.62□□□□□ -1.35
VAM3YOR106W YKE2P52553 114 aa6.62□□□□□ -1.35
VAM3YOR106W YGR125WP53273 1036 aa6.62□□□□□ -1.35
VAM3YOR106W YPR071WQ12346 211 aa6.62□□□□□ -1.35
VAM3YOR106W RFA1P22336 621 aaKnown RBP6.61□□□□□ -1.35
VAM3YOR106W HCM1P25364 564 aa6.61□□□□□ -1.35
VAM3YOR106W REC104P33323 182 aa6.61□□□□□ -1.35
VAM3YOR106W TOK1P40310 691 aa6.61□□□□□ -1.35
VAM3YOR106W IOC3P43596 787 aa6.61□□□□□ -1.35
VAM3YOR106W ERT1P38140 529 aa6.6□□□□□ -1.35
VAM3YOR106W URM1P40554 99 aaPredicted RBP6.6□□□□□ -1.35
VAM3YOR106W HUL4P40985 892 aa6.6□□□□□ -1.35
VAM3YOR106W NNF1P47149 201 aa6.6□□□□□ -1.35
VAM3YOR106W YDL124WQ07551 312 aaKnown RBP6.6□□□□□ -1.35
VAM3YOR106W NPC2Q12408 173 aa6.6□□□□□ -1.35
VAM3YOR106W CIT1P00890 479 aa6.59□□□□□ -1.35
VAM3YOR106W TUB2P02557 457 aaKnown RBP6.59□□□□□ -1.35
VAM3YOR106W BUL2Q03758 920 aaKnown RBP6.59□□□□□ -1.35
VAM3YOR106W WHI4Q07655 649 aaKnown RBP6.59□□□□□ -1.35
VAM3YOR106W HBN1Q96VH4 193 aa6.59□□□□□ -1.35
VAM3YOR106W MSD1P15179 658 aaKnown RBP6.58□□□□□ -1.36
VAM3YOR106W STE13P33894 931 aa6.58□□□□□ -1.36
VAM3YOR106W PET10P36139 283 aa6.58□□□□□ -1.36
VAM3YOR106W NPL3Q01560 414 aaKnown RBP RIP-Chip data6.58□□□□□ -1.36not detected
VAM3YOR106W FLC1Q08967 793 aa6.58□□□□□ -1.36
VAM3YOR106W KCS1Q12494 1050 aa6.58□□□□□ -1.36
VAM3YOR106W HUL5P53119 910 aa6.57□□□□□ -1.36
VAM3YOR106W GSF2Q04697 403 aaKnown RBP6.57□□□□□ -1.36
VAM3YOR106W URN1Q06525 465 aaKnown RBP6.57□□□□□ -1.36
VAM3YOR106W SED4P25365 1065 aa6.56□□□□□ -1.36
VAM3YOR106W TRM2P33753 639 aa6.56□□□□□ -1.36
VAM3YOR106W NCS6P53088 359 aa6.56□□□□□ -1.36
VAM3YOR106W CDC53Q12018 815 aaKnown RBP6.56□□□□□ -1.36
VAM3YOR106W NTO1Q12311 748 aa6.56□□□□□ -1.36
VAM3YOR106W DCG1P32460 244 aa6.55□□□□□ -1.36
VAM3YOR106W YHR020WP38708 688 aaKnown RBP6.55□□□□□ -1.36
VAM3YOR106W CEP3P40969 608 aa6.55□□□□□ -1.36
VAM3YOR106W PHO23P50947 330 aa6.55□□□□□ -1.36
VAM3YOR106W EXG2P52911 562 aa6.55□□□□□ -1.36
VAM3YOR106W TAF8Q03750 510 aa6.55□□□□□ -1.36
VAM3YOR106W PMA1P05030 918 aaKnown RBP6.54□□□□□ -1.36
VAM3YOR106W TOM70P07213 617 aaKnown RBP6.54□□□□□ -1.36
VAM3YOR106W TOP3P13099 656 aa6.54□□□□□ -1.36
VAM3YOR106W TYE7P33122 291 aaPredicted RBP6.54□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 38.6 ms