RNA–Protein interactions for RNA: YNL172W

APC1, Transcript of Largest subunit of the Anaphase-Promoting Complex/Cyclosome, yeast

Gene APC1, Length 5,247 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APC1	YNL172W	PMI40	P29952	429 aa	Known RBP	4.81	□□□□□ -1.64
APC1	YNL172W	UTP4	Q06679	776 aa	Known RBP	4.81	□□□□□ -1.64
APC1	YNL172W	SSP1	P38871	571 aa		4.81	□□□□□ -1.64
APC1	YNL172W	TIF4631	P39935	952 aa	Known RBP	4.81	□□□□□ -1.64
APC1	YNL172W	ROG3	P43602	733 aa		4.81	□□□□□ -1.64
APC1	YNL172W	VID30	P53076	958 aa		4.81	□□□□□ -1.64
APC1	YNL172W	ARP7	Q12406	477 aa		4.81	□□□□□ -1.64
APC1	YNL172W	RPL19A	P0CX82	189 aa	Known RBP	4.81	□□□□□ -1.64
APC1	YNL172W	RPL19B	P0CX83	189 aa	Predicted RBP	4.81	□□□□□ -1.64
APC1	YNL172W	YGR035C	P53222	116 aa		4.81	□□□□□ -1.64
APC1	YNL172W	TUB2	P02557	457 aa	Known RBP	4.81	□□□□□ -1.64
APC1	YNL172W	RSR1	P13856	272 aa		4.81	□□□□□ -1.64
APC1	YNL172W	MSH1	P25846	959 aa		4.81	□□□□□ -1.64
APC1	YNL172W	SWC3	P31376	625 aa		4.81	□□□□□ -1.64
APC1	YNL172W	NOP4	P37838	685 aa	Known RBP	4.81	□□□□□ -1.64
APC1	YNL172W	XDJ1	P39102	459 aa		4.81	□□□□□ -1.64
APC1	YNL172W	MNN11	P46985	422 aa	Known RBP	4.81	□□□□□ -1.64
APC1	YNL172W	EIS1	Q05050	843 aa	Known RBP	4.81	□□□□□ -1.64
APC1	YNL172W	BIM1	P40013	344 aa		4.8	□□□□□ -1.64
APC1	YNL172W	STE20	Q03497	939 aa	Known RBP	4.8	□□□□□ -1.64
APC1	YNL172W	YPR084W	Q06821	456 aa		4.8	□□□□□ -1.64
APC1	YNL172W	NSE1	Q07913	336 aa		4.8	□□□□□ -1.64
APC1	YNL172W	ARG8	P18544	423 aa		4.8	□□□□□ -1.64
APC1	YNL172W	MLS1	P30952	554 aa		4.8	□□□□□ -1.64
APC1	YNL172W	YKT6	P36015	200 aa	Known RBP	4.8	□□□□□ -1.64
APC1	YNL172W	STU2	P46675	888 aa		4.8	□□□□□ -1.64
APC1	YNL172W	LEE1	Q02799	301 aa	Known RBP	4.8	□□□□□ -1.64
APC1	YNL172W	TFB4	Q12004	338 aa		4.8	□□□□□ -1.64
APC1	YNL172W	RRP6	Q12149	733 aa	Known RBP	4.8	□□□□□ -1.64
APC1	YNL172W	IML2	P47031	731 aa		4.8	□□□□□ -1.64
APC1	YNL172W	GCV2	P49095	1034 aa		4.8	□□□□□ -1.64
APC1	YNL172W	PIB2	P53191	635 aa		4.8	□□□□□ -1.64
APC1	YNL172W	MTD1	Q02046	320 aa	Known RBP	4.8	□□□□□ -1.64
APC1	YNL172W	NKP2	Q06162	153 aa		4.8	□□□□□ -1.64
APC1	YNL172W	PLP2	Q12017	286 aa		4.8	□□□□□ -1.64
APC1	YNL172W	YDR524C-B	Q3E6R4	66 aa		4.8	□□□□□ -1.64
APC1	YNL172W	SNF1	P06782	633 aa	Known RBP	4.8	□□□□□ -1.64
APC1	YNL172W	PDE1	P22434	369 aa		4.8	□□□□□ -1.64
APC1	YNL172W	MAK31	P23059	88 aa		4.8	□□□□□ -1.64
APC1	YNL172W	NIP100	P33420	868 aa		4.8	□□□□□ -1.64
APC1	YNL172W	CCL1	P37366	393 aa		4.8	□□□□□ -1.64
APC1	YNL172W	APM3	P38153	483 aa		4.8	□□□□□ -1.64
APC1	YNL172W	SRP68	P38687	599 aa	Known RBP	4.8	□□□□□ -1.64
APC1	YNL172W	BTT1	P40314	149 aa	Predicted RBP	4.8	□□□□□ -1.64
APC1	YNL172W	DUS4	Q06063	367 aa		4.8	□□□□□ -1.64
APC1	YNL172W	EFG1	Q3E705	233 aa	Known RBP	4.8	□□□□□ -1.64
APC1	YNL172W	TUF1	P02992	437 aa	Known RBP	4.79	□□□□□ -1.64
APC1	YNL172W	CLN3	P13365	580 aa		4.79	□□□□□ -1.64
APC1	YNL172W	SPT15	P13393	240 aa	Known RBP	4.79	□□□□□ -1.64
APC1	YNL172W	YMR147W	P40218	223 aa	Known RBP	4.79	□□□□□ -1.64
APC1	YNL172W	MSH6	Q03834	1242 aa		4.79	□□□□□ -1.64
APC1	YNL172W	CDC53	Q12018	815 aa	Known RBP	4.79	□□□□□ -1.64
APC1	YNL172W	SPE3	Q12074	293 aa	Known RBP	4.79	□□□□□ -1.64
APC1	YNL172W	MDM35	O60200	86 aa		4.79	□□□□□ -1.64
APC1	YNL172W	LCB1	P25045	558 aa	Known RBP	4.79	□□□□□ -1.64
APC1	YNL172W	MET4	P32389	672 aa		4.79	□□□□□ -1.64
APC1	YNL172W	SAP190	P36123	1033 aa		4.79	□□□□□ -1.64
APC1	YNL172W	SUL1	P38359	859 aa		4.79	□□□□□ -1.64
APC1	YNL172W	HFM1	P51979	1187 aa		4.79	□□□□□ -1.64
APC1	YNL172W	UTP14	Q04500	899 aa	Known RBP	4.79	□□□□□ -1.64
APC1	YNL172W	STV1	P37296	890 aa		4.79	□□□□□ -1.64
APC1	YNL172W	YLR455W	Q06188	304 aa		4.79	□□□□□ -1.64
APC1	YNL172W	FLO11	P08640	1367 aa		4.79	□□□□□ -1.64
APC1	YNL172W	RAD27	P26793	382 aa		4.79	□□□□□ -1.64
APC1	YNL172W	RPC37	P36121	282 aa		4.79	□□□□□ -1.64
APC1	YNL172W	YHL041W	P38730	149 aa		4.79	□□□□□ -1.64
APC1	YNL172W	BRE5	P53741	515 aa	Known RBP	4.79	□□□□□ -1.64
APC1	YNL172W	SGF29	P25554	259 aa		4.79	□□□□□ -1.64
APC1	YNL172W	COY1	P34237	679 aa		4.79	□□□□□ -1.64
APC1	YNL172W	ADD66	P36040	267 aa		4.79	□□□□□ -1.64
APC1	YNL172W	PNT1	P38969	423 aa		4.79	□□□□□ -1.64
APC1	YNL172W	VMA13	P41807	478 aa	Known RBP	4.79	□□□□□ -1.64
APC1	YNL172W	NUT1	P53114	1132 aa		4.79	□□□□□ -1.64
APC1	YNL172W	MED1	Q12321	566 aa		4.79	□□□□□ -1.64
APC1	YNL172W	NHA1	Q99271	985 aa		4.79	□□□□□ -1.64
APC1	YNL172W	RGP1	P16664	663 aa		4.78	□□□□□ -1.64
APC1	YNL172W	LRE1	P25579	583 aa	Known RBP	4.78	□□□□□ -1.64
APC1	YNL172W	CMK1	P27466	446 aa	Known RBP	4.78	□□□□□ -1.64
APC1	YNL172W	HSP78	P33416	811 aa		4.78	□□□□□ -1.64
APC1	YNL172W	MIC60	P36112	540 aa		4.78	□□□□□ -1.64
APC1	YNL172W	KTR4	P38131	464 aa		4.78	□□□□□ -1.64
APC1	YNL172W	CIC1	P38779	376 aa	Known RBP	4.78	□□□□□ -1.64
APC1	YNL172W	SFB3	P38810	929 aa		4.78	□□□□□ -1.64
APC1	YNL172W	GEM1	P39722	662 aa		4.78	□□□□□ -1.64
APC1	YNL172W	AIM9	P40053	627 aa	Known RBP	4.78	□□□□□ -1.64
APC1	YNL172W	CHS6	P40955	746 aa		4.78	□□□□□ -1.64
APC1	YNL172W	ESC2	Q06340	456 aa		4.78	□□□□□ -1.64
APC1	YNL172W	HOM2	P13663	365 aa	Known RBP	4.78	□□□□□ -1.64
APC1	YNL172W	PGS1	P25578	521 aa		4.78	□□□□□ -1.64
APC1	YNL172W	KEL1	P38853	1164 aa	Known RBP	4.78	□□□□□ -1.64
APC1	YNL172W	MGA2	P40578	1113 aa		4.78	□□□□□ -1.64
APC1	YNL172W	HOP2	P53187	214 aa		4.78	□□□□□ -1.64
APC1	YNL172W	SVS1	Q12254	260 aa		4.78	□□□□□ -1.64
APC1	YNL172W	APC1	P53886	1748 aa		4.78	□□□□□ -1.64
APC1	YNL172W	HSP82	P02829	709 aa	Known RBP	4.78	□□□□□ -1.64
APC1	YNL172W	SAM1	P10659	382 aa	Known RBP	4.78	□□□□□ -1.64
APC1	YNL172W	GRX7	P38068	203 aa		4.78	□□□□□ -1.64
APC1	YNL172W	SIP5	P40210	489 aa	Known RBP	4.78	□□□□□ -1.64
APC1	YNL172W	CUR1	Q06469	252 aa		4.78	□□□□□ -1.64
APC1	YNL172W	RIM20	Q12033	661 aa		4.78	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms