RNA–Protein interactions for RNA: YNL153C

GIM3, Transcript of Subunit of the heterohexameric cochaperone prefoldin complex, yeast

Gene GIM3, Length 390 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
GIM3	YNL153C	TPO1	Q07824	586 aa		4.81	□□□□□ -1.64
GIM3	YNL153C	ESC8	Q08119	714 aa		4.81	□□□□□ -1.64
GIM3	YNL153C	YPR071W	Q12346	211 aa		4.81	□□□□□ -1.64
GIM3	YNL153C	OSH2	Q12451	1283 aa		4.81	□□□□□ -1.64
GIM3	YNL153C	CDC20	P26309	610 aa		4.8	□□□□□ -1.64
GIM3	YNL153C	FLR1	P38124	548 aa		4.8	□□□□□ -1.64
GIM3	YNL153C	POA1	P38218	177 aa		4.8	□□□□□ -1.64
GIM3	YNL153C	YER158C	P40095	573 aa		4.8	□□□□□ -1.64
GIM3	YNL153C	YGR125W	P53273	1036 aa		4.8	□□□□□ -1.64
GIM3	YNL153C	TPO2	P53283	614 aa		4.8	□□□□□ -1.64
GIM3	YNL153C	YLR358C	O13565	187 aa		4.79	□□□□□ -1.64
GIM3	YNL153C	CDC6	P09119	513 aa		4.79	□□□□□ -1.64
GIM3	YNL153C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.79	□□□□□ -1.64	not detected
GIM3	YNL153C	AFR1	P33304	620 aa		4.79	□□□□□ -1.64
GIM3	YNL153C	TSL1	P38427	1098 aa	Known RBP	4.79	□□□□□ -1.64
GIM3	YNL153C	GYP7	P48365	746 aa		4.79	□□□□□ -1.64
GIM3	YNL153C	HUL5	P53119	910 aa		4.79	□□□□□ -1.64
GIM3	YNL153C	ERP6	P53198	216 aa		4.79	□□□□□ -1.64
GIM3	YNL153C	UTP8	P53276	713 aa	Known RBP	4.79	□□□□□ -1.64
GIM3	YNL153C	CDA1	Q06702	301 aa		4.79	□□□□□ -1.64
GIM3	YNL153C	HSP60	P19882	572 aa	Known RBP	4.78	□□□□□ -1.64
GIM3	YNL153C	YKL222C	P35995	705 aa		4.78	□□□□□ -1.64
GIM3	YNL153C	TMA10	Q06177	86 aa		4.78	□□□□□ -1.64
GIM3	YNL153C	HMI1	Q12039	706 aa		4.78	□□□□□ -1.64
GIM3	YNL153C	HSF1	P10961	833 aa		4.77	□□□□□ -1.65
GIM3	YNL153C	CDC48	P25694	835 aa	Known RBP	4.77	□□□□□ -1.65
GIM3	YNL153C	CDC11	P32458	415 aa		4.77	□□□□□ -1.65
GIM3	YNL153C	GIP4	P39732	760 aa		4.77	□□□□□ -1.65
GIM3	YNL153C	NNF1	P47149	201 aa		4.77	□□□□□ -1.65
GIM3	YNL153C	VPS62	P53285	467 aa		4.77	□□□□□ -1.65
GIM3	YNL153C	YLR224W	Q05947	369 aa		4.77	□□□□□ -1.65
GIM3	YNL153C	WHI4	Q07655	649 aa	Known RBP	4.77	□□□□□ -1.65
GIM3	YNL153C	HBN1	Q96VH4	193 aa		4.77	□□□□□ -1.65
GIM3	YNL153C	CIT1	P00890	479 aa		4.76	□□□□□ -1.65
GIM3	YNL153C	SPE1	P08432	466 aa		4.76	□□□□□ -1.65
GIM3	YNL153C	TOP3	P13099	656 aa		4.76	□□□□□ -1.65
GIM3	YNL153C	LST4	P34239	828 aa		4.76	□□□□□ -1.65
GIM3	YNL153C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.76	□□□□□ -1.65	not detected
GIM3	YNL153C	PLB1	P39105	664 aa		4.76	□□□□□ -1.65
GIM3	YNL153C	SIT1	P39980	628 aa		4.76	□□□□□ -1.65
GIM3	YNL153C	TOK1	P40310	691 aa		4.76	□□□□□ -1.65
GIM3	YNL153C	MET12	P46151	657 aa		4.76	□□□□□ -1.65
GIM3	YNL153C	CLU1	Q03690	1277 aa	Known RBP	4.76	□□□□□ -1.65
GIM3	YNL153C	LCD1	Q04377	747 aa		4.76	□□□□□ -1.65
GIM3	YNL153C	ADY3	Q07732	790 aa		4.76	□□□□□ -1.65
GIM3	YNL153C	FLC1	Q08967	793 aa		4.76	□□□□□ -1.65
GIM3	YNL153C	CDC53	Q12018	815 aa	Known RBP	4.76	□□□□□ -1.65
GIM3	YNL153C	NOT3	P06102	836 aa	Known RBP	4.75	□□□□□ -1.65
GIM3	YNL153C	HIS5	P07172	385 aa		4.75	□□□□□ -1.65
GIM3	YNL153C	MSD1	P15179	658 aa	Known RBP	4.75	□□□□□ -1.65
GIM3	YNL153C	YCR015C	P25616	317 aa		4.75	□□□□□ -1.65
GIM3	YNL153C	DOM34	P33309	386 aa		4.75	□□□□□ -1.65
GIM3	YNL153C	YKR078W	P36158	585 aa	Known RBP	4.75	□□□□□ -1.65
GIM3	YNL153C	YHR020W	P38708	688 aa	Known RBP	4.75	□□□□□ -1.65
GIM3	YNL153C	IOC3	P43596	787 aa		4.75	□□□□□ -1.65
GIM3	YNL153C	PSP2	P50109	593 aa	Known RBP	4.75	□□□□□ -1.65
GIM3	YNL153C	MCM6	P53091	1017 aa	Known RBP	4.75	□□□□□ -1.65
GIM3	YNL153C	RFA1	P22336	621 aa	Known RBP	4.74	□□□□□ -1.65
GIM3	YNL153C	REC104	P33323	182 aa		4.74	□□□□□ -1.65
GIM3	YNL153C	SHM2	P37291	469 aa	Known RBP	4.74	□□□□□ -1.65
GIM3	YNL153C	RSP5	P39940	809 aa	Known RBP	4.74	□□□□□ -1.65
GIM3	YNL153C	YJL049W	P47048	450 aa		4.74	□□□□□ -1.65
GIM3	YNL153C	RAI1	P53063	387 aa	Known RBP	4.74	□□□□□ -1.65
GIM3	YNL153C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.74	□□□□□ -1.65	not detected
GIM3	YNL153C	BDF2	Q07442	638 aa		4.74	□□□□□ -1.65
GIM3	YNL153C	RPD3	P32561	433 aa		4.73	□□□□□ -1.65
GIM3	YNL153C	SRP40	P32583	406 aa	Predicted RBP	4.73	□□□□□ -1.65
GIM3	YNL153C	PET10	P36139	283 aa		4.73	□□□□□ -1.65
GIM3	YNL153C	HUL4	P40985	892 aa		4.73	□□□□□ -1.65
GIM3	YNL153C	CCM1	P48237	864 aa	Predicted RBP	4.73	□□□□□ -1.65
GIM3	YNL153C	YKE2	P52553	114 aa		4.73	□□□□□ -1.65
GIM3	YNL153C	BUL2	Q03758	920 aa	Known RBP	4.73	□□□□□ -1.65
GIM3	YNL153C	SSL1	Q04673	461 aa	Predicted RBP	4.73	□□□□□ -1.65
GIM3	YNL153C	NSE3	Q05541	303 aa		4.73	□□□□□ -1.65
GIM3	YNL153C	YDL124W	Q07551	312 aa	Known RBP	4.73	□□□□□ -1.65
GIM3	YNL153C	NOP12	Q08208	459 aa	Known RBP	4.73	□□□□□ -1.65
GIM3	YNL153C	YOL098C	Q12496	1037 aa		4.73	□□□□□ -1.65
GIM3	YNL153C	CTS1	P29029	562 aa		4.72	□□□□□ -1.65
GIM3	YNL153C	RPC82	P32349	654 aa		4.72	□□□□□ -1.65
GIM3	YNL153C	CEP3	P40969	608 aa		4.72	□□□□□ -1.65
GIM3	YNL153C	TAF8	Q03750	510 aa		4.72	□□□□□ -1.65
GIM3	YNL153C	TOM70	P07213	617 aa	Known RBP	4.71	□□□□□ -1.66
GIM3	YNL153C	STE13	P33894	931 aa		4.71	□□□□□ -1.66
GIM3	YNL153C	BET3	P36149	193 aa		4.71	□□□□□ -1.66
GIM3	YNL153C	CHA4	P43634	648 aa		4.71	□□□□□ -1.66
GIM3	YNL153C	CAN1	P04817	590 aa		4.7	□□□□□ -1.66
GIM3	YNL153C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.7	□□□□□ -1.66	not detected
GIM3	YNL153C	YKL091C	P33324	310 aa	Known RBP	4.7	□□□□□ -1.66
GIM3	YNL153C	YBR238C	P38330	731 aa	Known RBP	4.7	□□□□□ -1.66
GIM3	YNL153C	UBP6	P43593	499 aa	Known RBP	4.7	□□□□□ -1.66
GIM3	YNL153C	MNN10	P50108	393 aa	Known RBP	4.7	□□□□□ -1.66
GIM3	YNL153C	RTA1	P53047	317 aa		4.7	□□□□□ -1.66
GIM3	YNL153C	YOR131C	Q12486	218 aa		4.7	□□□□□ -1.66
GIM3	YNL153C	KCS1	Q12494	1050 aa		4.7	□□□□□ -1.66
GIM3	YNL153C	YIL108W	P40483	696 aa	Known RBP	4.69	□□□□□ -1.66
GIM3	YNL153C	PHO23	P50947	330 aa		4.69	□□□□□ -1.66
GIM3	YNL153C	VPS30	Q02948	557 aa		4.69	□□□□□ -1.66
GIM3	YNL153C	NPC2	Q12408	173 aa		4.69	□□□□□ -1.66
GIM3	YNL153C	GAL11	P19659	1081 aa		4.68	□□□□□ -1.66
GIM3	YNL153C	HCM1	P25364	564 aa		4.68	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 141.7 ms