RNA–Protein interactions for RNA: YNL078W

NIS1, Transcript of Protein localized in the bud neck at G2/M phase, yeast

Gene NIS1, Length 1,224 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NIS1	YNL078W	SGD1	Q06132	899 aa		5.01	□□□□□ -1.61
NIS1	YNL078W	OSW2	Q12202	724 aa		5.01	□□□□□ -1.61
NIS1	YNL078W	HBN1	Q96VH4	193 aa		5.01	□□□□□ -1.61
NIS1	YNL078W	MYO2	P19524	1574 aa	Known RBP	5	□□□□□ -1.61
NIS1	YNL078W	ECM5	Q03214	1411 aa		5	□□□□□ -1.61
NIS1	YNL078W	STI1	P15705	589 aa	Known RBP RIP-Chip data	5	□□□□□ -1.61	not detected
NIS1	YNL078W	PRP9	P19736	530 aa	Known RBP	5	□□□□□ -1.61
NIS1	YNL078W	ARE1	P25628	610 aa		5	□□□□□ -1.61
NIS1	YNL078W	PPH3	P32345	308 aa		5	□□□□□ -1.61
NIS1	YNL078W	YBR284W	P38150	797 aa		5	□□□□□ -1.61
NIS1	YNL078W	ECM21	P38167	1117 aa	Known RBP	5	□□□□□ -1.61
NIS1	YNL078W	MEF2	P39677	819 aa		5	□□□□□ -1.61
NIS1	YNL078W	NIT1	P40447	199 aa		5	□□□□□ -1.61
NIS1	YNL078W	GYP7	P48365	746 aa		5	□□□□□ -1.61
NIS1	YNL078W	CDC53	Q12018	815 aa	Known RBP	5	□□□□□ -1.61
NIS1	YNL078W	OSH2	Q12451	1283 aa		5	□□□□□ -1.61
NIS1	YNL078W	REV3	P14284	1504 aa		5	□□□□□ -1.61
NIS1	YNL078W	NUP170	P38181	1502 aa		4.99	□□□□□ -1.61
NIS1	YNL078W	ADE8	P04161	214 aa		4.99	□□□□□ -1.61
NIS1	YNL078W	TOP3	P13099	656 aa		4.99	□□□□□ -1.61
NIS1	YNL078W	HSP60	P19882	572 aa	Known RBP	4.99	□□□□□ -1.61
NIS1	YNL078W	FUN30	P31380	1131 aa		4.99	□□□□□ -1.61
NIS1	YNL078W	THI80	P35202	319 aa		4.99	□□□□□ -1.61
NIS1	YNL078W	YRO2	P38079	344 aa		4.99	□□□□□ -1.61
NIS1	YNL078W	AIM3	P38266	947 aa	Known RBP	4.99	□□□□□ -1.61
NIS1	YNL078W	CCC2	P38995	1004 aa		4.99	□□□□□ -1.61
NIS1	YNL078W	TAF8	Q03750	510 aa		4.99	□□□□□ -1.61
NIS1	YNL078W	YDR132C	Q03900	495 aa		4.99	□□□□□ -1.61
NIS1	YNL078W	DUS4	Q06063	367 aa		4.99	□□□□□ -1.61
NIS1	YNL078W	YPL277C	Q08989	487 aa		4.99	□□□□□ -1.61
NIS1	YNL078W	YPR071W	Q12346	211 aa		4.99	□□□□□ -1.61
NIS1	YNL078W	SRP40	P32583	406 aa	Predicted RBP	4.98	□□□□□ -1.61
NIS1	YNL078W	YKE2	P52553	114 aa		4.98	□□□□□ -1.61
NIS1	YNL078W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.98	□□□□□ -1.61	not detected
NIS1	YNL078W	PPM2	Q08282	695 aa		4.98	□□□□□ -1.61
NIS1	YNL078W	THO2	P53552	1597 aa	Known RBP	4.98	□□□□□ -1.61
NIS1	YNL078W	SSK2	P53599	1579 aa		4.98	□□□□□ -1.61
NIS1	YNL078W	SIN3	P22579	1536 aa		4.97	□□□□□ -1.61
NIS1	YNL078W	BPT1	P14772	1559 aa		4.97	□□□□□ -1.61
NIS1	YNL078W	SCC2	Q04002	1493 aa		4.97	□□□□□ -1.61
NIS1	YNL078W	YTA7	P40340	1379 aa		4.97	□□□□□ -1.61
NIS1	YNL078W	CAN1	P04817	590 aa		4.97	□□□□□ -1.61
NIS1	YNL078W	CDC6	P09119	513 aa		4.97	□□□□□ -1.61
NIS1	YNL078W	BET3	P36149	193 aa		4.97	□□□□□ -1.61
NIS1	YNL078W	YER158C	P40095	573 aa		4.97	□□□□□ -1.61
NIS1	YNL078W	TOK1	P40310	691 aa		4.97	□□□□□ -1.61
NIS1	YNL078W	RTA1	P53047	317 aa		4.97	□□□□□ -1.61
NIS1	YNL078W	GCN5	Q03330	439 aa		4.97	□□□□□ -1.61
NIS1	YNL078W	POL1	P13382	1468 aa		4.96	□□□□□ -1.62
NIS1	YNL078W	RPS13	P05756	151 aa	Known RBP	4.96	□□□□□ -1.62
NIS1	YNL078W	MSD1	P15179	658 aa	Known RBP	4.96	□□□□□ -1.62
NIS1	YNL078W	PRP6	P19735	899 aa	Predicted RBP	4.96	□□□□□ -1.62
NIS1	YNL078W	YKR078W	P36158	585 aa	Known RBP	4.96	□□□□□ -1.62
NIS1	YNL078W	YBR238C	P38330	731 aa	Known RBP	4.96	□□□□□ -1.62
NIS1	YNL078W	MND2	P40577	368 aa		4.96	□□□□□ -1.62
NIS1	YNL078W	BUD6	P41697	788 aa		4.96	□□□□□ -1.62
NIS1	YNL078W	GCV2	P49095	1034 aa		4.96	□□□□□ -1.62
NIS1	YNL078W	PRP43	P53131	767 aa	Known RBP	4.96	□□□□□ -1.62
NIS1	YNL078W	GTF1	P53260	183 aa	Predicted RBP	4.96	□□□□□ -1.62
NIS1	YNL078W	RPN4	Q03465	531 aa		4.96	□□□□□ -1.62
NIS1	YNL078W	LCD1	Q04377	747 aa		4.96	□□□□□ -1.62
NIS1	YNL078W	CDA1	Q06702	301 aa		4.96	□□□□□ -1.62
NIS1	YNL078W	TAF2	P23255	1407 aa		4.96	□□□□□ -1.62
NIS1	YNL078W	SEC3	P33332	1336 aa	Known RBP	4.96	□□□□□ -1.62
NIS1	YNL078W	SOD2	P00447	233 aa		4.95	□□□□□ -1.62
NIS1	YNL078W	CDC11	P32458	415 aa		4.95	□□□□□ -1.62
NIS1	YNL078W	YKL091C	P33324	310 aa	Known RBP	4.95	□□□□□ -1.62
NIS1	YNL078W	PET10	P36139	283 aa		4.95	□□□□□ -1.62
NIS1	YNL078W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.95	□□□□□ -1.62	not detected
NIS1	YNL078W	UBP5	P39944	805 aa		4.95	□□□□□ -1.62
NIS1	YNL078W	ZRG8	P40021	1076 aa		4.95	□□□□□ -1.62
NIS1	YNL078W	RIM8	P53179	542 aa		4.95	□□□□□ -1.62
NIS1	YNL078W	TPO2	P53283	614 aa		4.95	□□□□□ -1.62
NIS1	YNL078W	ENA1	P13587	1091 aa		4.94	□□□□□ -1.62
NIS1	YNL078W	CDC48	P25694	835 aa	Known RBP	4.94	□□□□□ -1.62
NIS1	YNL078W	SRP101	P32916	621 aa		4.94	□□□□□ -1.62
NIS1	YNL078W	IRC24	P40580	263 aa		4.94	□□□□□ -1.62
NIS1	YNL078W	HUL4	P40985	892 aa		4.94	□□□□□ -1.62
NIS1	YNL078W	YGR012W	P53206	393 aa		4.94	□□□□□ -1.62
NIS1	YNL078W	ORC1	P54784	914 aa	Predicted RBP	4.94	□□□□□ -1.62
NIS1	YNL078W	ENA2	Q01896	1091 aa		4.94	□□□□□ -1.62
NIS1	YNL078W	TPO1	Q07824	586 aa		4.94	□□□□□ -1.62
NIS1	YNL078W	YOR352W	Q08816	343 aa		4.94	□□□□□ -1.62
NIS1	YNL078W	ENA5	Q12691	1091 aa		4.94	□□□□□ -1.62
NIS1	YNL078W	CDC20	P26309	610 aa		4.93	□□□□□ -1.62
NIS1	YNL078W	REC104	P33323	182 aa		4.93	□□□□□ -1.62
NIS1	YNL078W	TOD6	P34219	525 aa		4.93	□□□□□ -1.62
NIS1	YNL078W	GGA2	P38817	585 aa	Known RBP	4.93	□□□□□ -1.62
NIS1	YNL078W	UBP6	P43593	499 aa	Known RBP	4.93	□□□□□ -1.62
NIS1	YNL078W	SPT20	P50875	604 aa		4.93	□□□□□ -1.62
NIS1	YNL078W	VPS62	P53285	467 aa		4.93	□□□□□ -1.62
NIS1	YNL078W	YPR196W	Q06595	470 aa		4.93	□□□□□ -1.62
NIS1	YNL078W	ADY3	Q07732	790 aa		4.93	□□□□□ -1.62
NIS1	YNL078W	GPB1	Q08886	897 aa		4.93	□□□□□ -1.62
NIS1	YNL078W	YOR131C	Q12486	218 aa		4.93	□□□□□ -1.62
NIS1	YNL078W	CIT2	P08679	460 aa		4.92	□□□□□ -1.62
NIS1	YNL078W	ERR1	P0CX10	437 aa		4.92	□□□□□ -1.62
NIS1	YNL078W	ERR2	P0CX11	437 aa		4.92	□□□□□ -1.62
NIS1	YNL078W	RPC82	P32349	654 aa		4.92	□□□□□ -1.62
NIS1	YNL078W	IME2	P32581	645 aa		4.92	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 96.2 ms