RNA–Protein interactions for RNA: YIL126W

STH1, Transcript of ATPase component of the RSC chromatin remodeling complex, yeast

Gene STH1, Length 4,080 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
STH1	YIL126W	BNI5	P53890	448 aa	Known RBP	2.38	□□□□□ -2.03
STH1	YIL126W	PRO2	P54885	456 aa	Known RBP	2.38	□□□□□ -2.03
STH1	YIL126W	PML39	Q03760	334 aa		2.38	□□□□□ -2.03
STH1	YIL126W	DPL1	Q05567	589 aa		2.38	□□□□□ -2.03
STH1	YIL126W	YLH47	Q06493	454 aa		2.38	□□□□□ -2.03
STH1	YIL126W	BMT6	Q12291	365 aa		2.38	□□□□□ -2.03
STH1	YIL126W	MHP1	P43638	1398 aa		2.38	□□□□□ -2.03
STH1	YIL126W	RPS8A	P0CX39	200 aa	Known RBP	2.38	□□□□□ -2.03
STH1	YIL126W	RPS8B	P0CX40	200 aa	Known RBP	2.38	□□□□□ -2.03
STH1	YIL126W	KEX2	P13134	814 aa		2.38	□□□□□ -2.03
STH1	YIL126W	ARG8	P18544	423 aa		2.38	□□□□□ -2.03
STH1	YIL126W	SEC6	P32844	805 aa		2.38	□□□□□ -2.03
STH1	YIL126W	NFU1	P32860	256 aa		2.38	□□□□□ -2.03
STH1	YIL126W	OSH3	P38713	996 aa	Known RBP	2.38	□□□□□ -2.03
STH1	YIL126W	PET100	P38958	111 aa		2.38	□□□□□ -2.03
STH1	YIL126W	FET5	P43561	622 aa		2.38	□□□□□ -2.03
STH1	YIL126W	IML2	P47031	731 aa		2.38	□□□□□ -2.03
STH1	YIL126W	HXT16	P47185	567 aa		2.38	□□□□□ -2.03
STH1	YIL126W	COS5	P47187	383 aa		2.38	□□□□□ -2.03
STH1	YIL126W	YNL058C	P53947	316 aa		2.38	□□□□□ -2.03
STH1	YIL126W	OMS1	Q06668	471 aa		2.38	□□□□□ -2.03
STH1	YIL126W	DNL4	Q08387	944 aa	Predicted RBP	2.38	□□□□□ -2.03
STH1	YIL126W	RIM20	Q12033	661 aa		2.38	□□□□□ -2.03
STH1	YIL126W	IKI3	Q06706	1349 aa	Known RBP	2.38	□□□□□ -2.03
STH1	YIL126W	SUI3	P09064	285 aa	Known RBP	2.37	□□□□□ -2.03
STH1	YIL126W	RPS24A	P0CX31	135 aa	Known RBP	2.37	□□□□□ -2.03
STH1	YIL126W	RPS24B	P0CX32	135 aa	Known RBP	2.37	□□□□□ -2.03
STH1	YIL126W	PUP3	P25451	205 aa	Known RBP	2.37	□□□□□ -2.03
STH1	YIL126W	MSH1	P25846	959 aa		2.37	□□□□□ -2.03
STH1	YIL126W	PPH3	P32345	308 aa		2.37	□□□□□ -2.03
STH1	YIL126W	ISF1	P32488	338 aa		2.37	□□□□□ -2.03
STH1	YIL126W	YHR218W	P38899	603 aa		2.37	□□□□□ -2.03
STH1	YIL126W	VPS8	P39702	1274 aa		2.37	□□□□□ -2.03
STH1	YIL126W	RTT105	P40063	208 aa		2.37	□□□□□ -2.03
STH1	YIL126W	MOB1	P40484	314 aa		2.37	□□□□□ -2.03
STH1	YIL126W	EAF6	P47128	113 aa		2.37	□□□□□ -2.03
STH1	YIL126W	VPS25	P47142	202 aa		2.37	□□□□□ -2.03
STH1	YIL126W	INP52	P50942	1183 aa		2.37	□□□□□ -2.03
STH1	YIL126W	HXT17	P53631	564 aa		2.37	□□□□□ -2.03
STH1	YIL126W	RTC4	P53850	401 aa		2.37	□□□□□ -2.03
STH1	YIL126W	PLP1	Q04004	230 aa		2.37	□□□□□ -2.03
STH1	YIL126W	TAP42	Q04372	366 aa		2.37	□□□□□ -2.03
STH1	YIL126W	CDC45	Q08032	650 aa		2.37	□□□□□ -2.03
STH1	YIL126W	YOL024W	Q08172	172 aa		2.37	□□□□□ -2.03
STH1	YIL126W	YBL111C	Q3E7Y5	667 aa		2.37	□□□□□ -2.03
STH1	YIL126W	MTF2	P10849	440 aa		2.37	□□□□□ -2.03
STH1	YIL126W	SPT15	P13393	240 aa	Known RBP	2.37	□□□□□ -2.03
STH1	YIL126W	MAK5	P38112	773 aa	Predicted RBP	2.37	□□□□□ -2.03
STH1	YIL126W	UTP18	P40362	594 aa	Predicted RBP	2.37	□□□□□ -2.03
STH1	YIL126W	VTC2	P43585	828 aa		2.37	□□□□□ -2.03
STH1	YIL126W	ENT3	P47160	408 aa		2.37	□□□□□ -2.03
STH1	YIL126W	MSB3	P48566	633 aa	Predicted RBP	2.37	□□□□□ -2.03
STH1	YIL126W	RAD17	P48581	401 aa		2.37	□□□□□ -2.03
STH1	YIL126W	ESC8	Q08119	714 aa		2.37	□□□□□ -2.03
STH1	YIL126W	CHS5	Q12114	671 aa	Known RBP	2.37	□□□□□ -2.03
STH1	YIL126W	PGA3	Q12746	312 aa	Known RBP	2.37	□□□□□ -2.03
STH1	YIL126W	RPP0	P05317	312 aa	Known RBP	2.37	□□□□□ -2.03
STH1	YIL126W	TOM70	P07213	617 aa	Known RBP	2.37	□□□□□ -2.03
STH1	YIL126W	HMG2	P12684	1045 aa		2.37	□□□□□ -2.03
STH1	YIL126W	HOM2	P13663	365 aa	Known RBP	2.37	□□□□□ -2.03
STH1	YIL126W	DPB3	P27344	201 aa		2.37	□□□□□ -2.03
STH1	YIL126W	HEL1	P36113	551 aa		2.37	□□□□□ -2.03
STH1	YIL126W	GIP1	P38229	639 aa		2.37	□□□□□ -2.03
STH1	YIL126W	CHS7	P38843	316 aa		2.37	□□□□□ -2.03
STH1	YIL126W	RTR1	P40084	226 aa	Predicted RBP	2.37	□□□□□ -2.03
STH1	YIL126W	FAU1	P40099	211 aa		2.37	□□□□□ -2.03
STH1	YIL126W	GCD10	P41814	478 aa		2.37	□□□□□ -2.03
STH1	YIL126W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	2.37	□□□□□ -2.03	not detected
STH1	YIL126W	JJJ3	P47138	172 aa		2.37	□□□□□ -2.03
STH1	YIL126W	MON1	P53129	644 aa		2.37	□□□□□ -2.03
STH1	YIL126W	HOP2	P53187	214 aa		2.37	□□□□□ -2.03
STH1	YIL126W	ZPR1	P53303	486 aa	Known RBP	2.37	□□□□□ -2.03
STH1	YIL126W	COG6	P53959	839 aa		2.37	□□□□□ -2.03
STH1	YIL126W	RSC2	Q06488	889 aa		2.37	□□□□□ -2.03
STH1	YIL126W	CEX1	Q12453	761 aa		2.37	□□□□□ -2.03
STH1	YIL126W	RKM4	Q12504	494 aa		2.37	□□□□□ -2.03
STH1	YIL126W	HVG1	P0CE11	249 aa		2.37	□□□□□ -2.03
STH1	YIL126W	MRPS28	P21771	286 aa		2.37	□□□□□ -2.03
STH1	YIL126W	CLB4	P24871	460 aa		2.37	□□□□□ -2.03
STH1	YIL126W	EUG1	P32474	517 aa		2.37	□□□□□ -2.03
STH1	YIL126W	KDX1	P36005	433 aa		2.37	□□□□□ -2.03
STH1	YIL126W	CIC1	P38779	376 aa	Known RBP	2.37	□□□□□ -2.03
STH1	YIL126W	BOI2	P39969	1040 aa		2.37	□□□□□ -2.03
STH1	YIL126W	YER158C	P40095	573 aa		2.37	□□□□□ -2.03
STH1	YIL126W	CTH1	P47976	325 aa		2.37	□□□□□ -2.03
STH1	YIL126W	NUP84	P52891	726 aa		2.37	□□□□□ -2.03
STH1	YIL126W	YGL082W	P53155	381 aa		2.37	□□□□□ -2.03
STH1	YIL126W	SUR7	P54003	302 aa		2.37	□□□□□ -2.03
STH1	YIL126W	PIG1	Q06216	648 aa		2.37	□□□□□ -2.03
STH1	YIL126W	SMD2	Q06217	110 aa	Known RBP	2.37	□□□□□ -2.03
STH1	YIL126W	VPS36	Q06696	566 aa		2.37	□□□□□ -2.03
STH1	YIL126W	CSR1	Q06705	408 aa	Known RBP	2.37	□□□□□ -2.03
STH1	YIL126W	SLX4	Q12098	748 aa		2.37	□□□□□ -2.03
STH1	YIL126W	SPO24	Q3E752	67 aa		2.37	□□□□□ -2.03
STH1	YIL126W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	2.36	□□□□□ -2.03	not detected
STH1	YIL126W	PMS1	P14242	873 aa		2.36	□□□□□ -2.03
STH1	YIL126W	RED1	P14291	827 aa		2.36	□□□□□ -2.03
STH1	YIL126W	VMA4	P22203	233 aa	Known RBP	2.36	□□□□□ -2.03
STH1	YIL126W	CWH43	P25618	953 aa		2.36	□□□□□ -2.03
STH1	YIL126W	HOG1	P32485	435 aa		2.36	□□□□□ -2.03

Retrieved 100 of 5,963 RNA–protein pairs in 26.3 ms