RNA–Protein interactions for RNA: YGL025C

PGD1, Transcript of Subunit of the RNA polymerase II mediator complex, yeast

Gene PGD1, Length 1,194 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PGD1	YGL025C	ADY3	Q07732	790 aa		4.98	□□□□□ -1.61
PGD1	YGL025C	YLR358C	O13565	187 aa		4.97	□□□□□ -1.61
PGD1	YGL025C	ADE8	P04161	214 aa		4.97	□□□□□ -1.61
PGD1	YGL025C	ENA1	P13587	1091 aa		4.97	□□□□□ -1.61
PGD1	YGL025C	PRP9	P19736	530 aa	Known RBP	4.97	□□□□□ -1.61
PGD1	YGL025C	YCR015C	P25616	317 aa		4.97	□□□□□ -1.61
PGD1	YGL025C	SRP101	P32916	621 aa		4.97	□□□□□ -1.61
PGD1	YGL025C	YRO2	P38079	344 aa		4.97	□□□□□ -1.61
PGD1	YGL025C	ERT1	P38140	529 aa		4.97	□□□□□ -1.61
PGD1	YGL025C	YBR238C	P38330	731 aa	Known RBP	4.97	□□□□□ -1.61
PGD1	YGL025C	YER158C	P40095	573 aa		4.97	□□□□□ -1.61
PGD1	YGL025C	YGR012W	P53206	393 aa		4.97	□□□□□ -1.61
PGD1	YGL025C	ENA2	Q01896	1091 aa		4.97	□□□□□ -1.61
PGD1	YGL025C	CLU1	Q03690	1277 aa	Known RBP	4.97	□□□□□ -1.61
PGD1	YGL025C	YAP6	Q03935	383 aa		4.97	□□□□□ -1.61
PGD1	YGL025C	UBX5	Q06682	500 aa		4.97	□□□□□ -1.61
PGD1	YGL025C	SPO75	Q07798	868 aa		4.97	□□□□□ -1.61
PGD1	YGL025C	ENA5	Q12691	1091 aa		4.97	□□□□□ -1.61
PGD1	YGL025C	POA1	P38218	177 aa		4.96	□□□□□ -1.62
PGD1	YGL025C	MET12	P46151	657 aa		4.96	□□□□□ -1.62
PGD1	YGL025C	YJL049W	P47048	450 aa		4.96	□□□□□ -1.62
PGD1	YGL025C	EAF1	Q06337	982 aa		4.96	□□□□□ -1.62
PGD1	YGL025C	HSF1	P10961	833 aa		4.95	□□□□□ -1.62
PGD1	YGL025C	RPC82	P32349	654 aa		4.95	□□□□□ -1.62
PGD1	YGL025C	LST4	P34239	828 aa		4.95	□□□□□ -1.62
PGD1	YGL025C	YHR020W	P38708	688 aa	Known RBP	4.95	□□□□□ -1.62
PGD1	YGL025C	GIP4	P39732	760 aa		4.95	□□□□□ -1.62
PGD1	YGL025C	TIM54	P47045	478 aa		4.95	□□□□□ -1.62
PGD1	YGL025C	NNF1	P47149	201 aa		4.95	□□□□□ -1.62
PGD1	YGL025C	ERP6	P53198	216 aa		4.95	□□□□□ -1.62
PGD1	YGL025C	YLR224W	Q05947	369 aa		4.95	□□□□□ -1.62
PGD1	YGL025C	HBN1	Q96VH4	193 aa		4.95	□□□□□ -1.62
PGD1	YGL025C	CIT1	P00890	479 aa		4.94	□□□□□ -1.62
PGD1	YGL025C	HIS5	P07172	385 aa		4.94	□□□□□ -1.62
PGD1	YGL025C	SPE1	P08432	466 aa		4.94	□□□□□ -1.62
PGD1	YGL025C	CDC48	P25694	835 aa	Known RBP	4.94	□□□□□ -1.62
PGD1	YGL025C	YBR284W	P38150	797 aa		4.94	□□□□□ -1.62
PGD1	YGL025C	CCC2	P38995	1004 aa		4.94	□□□□□ -1.62
PGD1	YGL025C	TOK1	P40310	691 aa		4.94	□□□□□ -1.62
PGD1	YGL025C	IOC3	P43596	787 aa		4.94	□□□□□ -1.62
PGD1	YGL025C	CHA4	P43634	648 aa		4.94	□□□□□ -1.62
PGD1	YGL025C	HUL5	P53119	910 aa		4.94	□□□□□ -1.62
PGD1	YGL025C	TPO2	P53283	614 aa		4.94	□□□□□ -1.62
PGD1	YGL025C	YPR071W	Q12346	211 aa		4.94	□□□□□ -1.62
PGD1	YGL025C	OSH2	Q12451	1283 aa		4.94	□□□□□ -1.62
PGD1	YGL025C	HSP60	P19882	572 aa	Known RBP	4.93	□□□□□ -1.62
PGD1	YGL025C	ARE1	P25628	610 aa		4.93	□□□□□ -1.62
PGD1	YGL025C	YGR125W	P53273	1036 aa		4.93	□□□□□ -1.62
PGD1	YGL025C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	RIP-Chip
PGD1	YGL025C	LCD1	Q04377	747 aa		4.93	□□□□□ -1.62
PGD1	YGL025C	YPR196W	Q06595	470 aa		4.93	□□□□□ -1.62
PGD1	YGL025C	BDF2	Q07442	638 aa		4.93	□□□□□ -1.62
PGD1	YGL025C	NOP12	Q08208	459 aa	Known RBP	4.93	□□□□□ -1.62
PGD1	YGL025C	FLC1	Q08967	793 aa		4.93	□□□□□ -1.62
PGD1	YGL025C	TOP3	P13099	656 aa		4.92	□□□□□ -1.62
PGD1	YGL025C	MSD1	P15179	658 aa	Known RBP	4.92	□□□□□ -1.62
PGD1	YGL025C	CTS1	P29029	562 aa		4.92	□□□□□ -1.62
PGD1	YGL025C	CDC11	P32458	415 aa		4.92	□□□□□ -1.62
PGD1	YGL025C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	not detected
PGD1	YGL025C	PLB1	P39105	664 aa		4.92	□□□□□ -1.62
PGD1	YGL025C	TMA10	Q06177	86 aa		4.92	□□□□□ -1.62
PGD1	YGL025C	WHI4	Q07655	649 aa	Known RBP	4.92	□□□□□ -1.62
PGD1	YGL025C	YKL222C	P35995	705 aa		4.91	□□□□□ -1.62
PGD1	YGL025C	PET10	P36139	283 aa		4.91	□□□□□ -1.62
PGD1	YGL025C	SHM2	P37291	469 aa	Known RBP	4.91	□□□□□ -1.62
PGD1	YGL025C	OCA5	P38738	679 aa		4.91	□□□□□ -1.62
PGD1	YGL025C	URM1	P40554	99 aa	Predicted RBP	4.91	□□□□□ -1.62
PGD1	YGL025C	CCM1	P48237	864 aa	Predicted RBP	4.91	□□□□□ -1.62
PGD1	YGL025C	TAF8	Q03750	510 aa		4.91	□□□□□ -1.62
PGD1	YGL025C	NSE3	Q05541	303 aa		4.91	□□□□□ -1.62
PGD1	YGL025C	NOT3	P06102	836 aa	Known RBP	4.9	□□□□□ -1.63
PGD1	YGL025C	STE11	P23561	717 aa		4.9	□□□□□ -1.63
PGD1	YGL025C	REC104	P33323	182 aa		4.9	□□□□□ -1.63
PGD1	YGL025C	RSP5	P39940	809 aa	Known RBP	4.9	□□□□□ -1.63
PGD1	YGL025C	PSP2	P50109	593 aa	Known RBP	4.9	□□□□□ -1.63
PGD1	YGL025C	RAI1	P53063	387 aa	Known RBP	4.9	□□□□□ -1.63
PGD1	YGL025C	YOL098C	Q12496	1037 aa		4.9	□□□□□ -1.63
PGD1	YGL025C	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
PGD1	YGL025C	BET3	P36149	193 aa		4.89	□□□□□ -1.63
PGD1	YGL025C	MNN10	P50108	393 aa	Known RBP	4.89	□□□□□ -1.63
PGD1	YGL025C	NCS6	P53088	359 aa		4.89	□□□□□ -1.63
PGD1	YGL025C	MCM6	P53091	1017 aa	Known RBP	4.89	□□□□□ -1.63
PGD1	YGL025C	STE13	P33894	931 aa		4.88	□□□□□ -1.63
PGD1	YGL025C	ATG19	P35193	415 aa		4.88	□□□□□ -1.63
PGD1	YGL025C	UBP6	P43593	499 aa	Known RBP	4.88	□□□□□ -1.63
PGD1	YGL025C	RTA1	P53047	317 aa		4.88	□□□□□ -1.63
PGD1	YGL025C	SSL1	Q04673	461 aa	Predicted RBP	4.88	□□□□□ -1.63
PGD1	YGL025C	ENV7	Q12003	364 aa		4.88	□□□□□ -1.63
PGD1	YGL025C	CDC53	Q12018	815 aa	Known RBP	4.88	□□□□□ -1.63
PGD1	YGL025C	UPC2	Q12151	913 aa		4.88	□□□□□ -1.63
PGD1	YGL025C	KCS1	Q12494	1050 aa		4.88	□□□□□ -1.63
PGD1	YGL025C	CAN1	P04817	590 aa		4.87	□□□□□ -1.63
PGD1	YGL025C	RPP2A	P05319	106 aa	Known RBP	4.87	□□□□□ -1.63
PGD1	YGL025C	FBP1	P09201	348 aa		4.87	□□□□□ -1.63
PGD1	YGL025C	STE14	P32584	239 aa		4.87	□□□□□ -1.63
PGD1	YGL025C	HUL4	P40985	892 aa		4.87	□□□□□ -1.63
PGD1	YGL025C	EXG2	P52911	562 aa		4.87	□□□□□ -1.63
PGD1	YGL025C	HDA1	P53973	706 aa		4.87	□□□□□ -1.63
PGD1	YGL025C	YDL124W	Q07551	312 aa	Known RBP	4.87	□□□□□ -1.63
PGD1	YGL025C	PPM2	Q08282	695 aa		4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 36.7 ms