RNA–Protein interactions for RNA: YFR004W

RPN11, Transcript of Metalloprotease subunit of 19S regulatory particle, yeastyeast

Gene RPN11, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN11YFR004W CAD1P24813 409 aaKnown RBP6.72□□□□□ -1.33
RPN11YFR004W GSY2P27472 705 aa6.72□□□□□ -1.33
RPN11YFR004W PRO3P32263 286 aaKnown RBP6.72□□□□□ -1.33
RPN11YFR004W GCD11P32481 527 aaKnown RBP6.72□□□□□ -1.33
RPN11YFR004W FLR1P38124 548 aa6.72□□□□□ -1.33
RPN11YFR004W TPM2P40414 161 aa6.72□□□□□ -1.33
RPN11YFR004W KTR7P40504 517 aa6.72□□□□□ -1.33
RPN11YFR004W MDJ2P42834 146 aa6.72□□□□□ -1.33
RPN11YFR004W STU2P46675 888 aa6.72□□□□□ -1.33
RPN11YFR004W UFD2P54860 961 aa6.72□□□□□ -1.33
RPN11YFR004W MAP1Q01662 387 aaKnown RBP RIP-Chip data6.72□□□□□ -1.33not detected
RPN11YFR004W PGI1P12709 554 aaKnown RBP6.71□□□□□ -1.34
RPN11YFR004W ACE2P21192 770 aa6.71□□□□□ -1.34
RPN11YFR004W DUR3P33413 735 aa6.71□□□□□ -1.34
RPN11YFR004W YKT6P36015 200 aaKnown RBP6.71□□□□□ -1.34
RPN11YFR004W REG2P38232 338 aa6.71□□□□□ -1.34
RPN11YFR004W OSW7P43611 510 aa6.71□□□□□ -1.34
RPN11YFR004W AZR1P50080 613 aa6.71□□□□□ -1.34
RPN11YFR004W HOS3Q02959 697 aaKnown RBP6.71□□□□□ -1.34
RPN11YFR004W WAR1Q03631 944 aa6.71□□□□□ -1.34
RPN11YFR004W PRT1P06103 763 aaKnown RBP6.7□□□□□ -1.34
RPN11YFR004W VPS1P21576 704 aaKnown RBP6.7□□□□□ -1.34
RPN11YFR004W SWI4P25302 1093 aaKnown RBP6.7□□□□□ -1.34
RPN11YFR004W PSY4P38193 441 aa6.7□□□□□ -1.34
RPN11YFR004W RFT1P38206 574 aaPredicted RBP6.7□□□□□ -1.34
RPN11YFR004W UBX7P38349 436 aa6.7□□□□□ -1.34
RPN11YFR004W STR2P47164 639 aa6.7□□□□□ -1.34
RPN11YFR004W ISM1P48526 1002 aa6.7□□□□□ -1.34
RPN11YFR004W FOL1P53848 824 aa6.7□□□□□ -1.34
RPN11YFR004W RPS15Q01855 142 aaKnown RBP6.7□□□□□ -1.34
RPN11YFR004W TFC6Q06339 672 aa6.7□□□□□ -1.34
RPN11YFR004W ERF2Q06551 359 aa6.7□□□□□ -1.34
RPN11YFR004W UTP4Q06679 776 aaKnown RBP6.7□□□□□ -1.34
RPN11YFR004W BUD20Q08004 166 aaPredicted RBP6.7□□□□□ -1.34
RPN11YFR004W DCS2Q12123 353 aa6.7□□□□□ -1.34
RPN11YFR004W CDC6P09119 513 aa6.69□□□□□ -1.34
RPN11YFR004W MAS2P11914 482 aa6.69□□□□□ -1.34
RPN11YFR004W ISF1P32488 338 aa6.69□□□□□ -1.34
RPN11YFR004W MYO3P36006 1272 aa6.69□□□□□ -1.34
RPN11YFR004W VPS45P38932 577 aa6.69□□□□□ -1.34
RPN11YFR004W VPS30Q02948 557 aa6.69□□□□□ -1.34
RPN11YFR004W MSC2Q03455 724 aa6.69□□□□□ -1.34
RPN11YFR004W YEL077CQ3E7X8 1277 aa6.69□□□□□ -1.34
RPN11YFR004W RIF1P29539 1916 aa6.68□□□□□ -1.34
RPN11YFR004W TEL1P38110 2787 aa6.68□□□□□ -1.34
RPN11YFR004W TY1B-AO13527 1196 aaKnown RBP6.68□□□□□ -1.34
RPN11YFR004W NUC1P08466 329 aa6.68□□□□□ -1.34
RPN11YFR004W SWI6P09959 803 aa6.68□□□□□ -1.34
RPN11YFR004W POL3P15436 1097 aa6.68□□□□□ -1.34
RPN11YFR004W IDI1P15496 288 aa6.68□□□□□ -1.34
RPN11YFR004W CBP3P21560 335 aa6.68□□□□□ -1.34
RPN11YFR004W CDC15P27636 974 aa6.68□□□□□ -1.34
RPN11YFR004W URA1P28272 314 aaPredicted RBP6.68□□□□□ -1.34
RPN11YFR004W SAC6P32599 642 aaKnown RBP6.68□□□□□ -1.34
RPN11YFR004W ANP1P32629 500 aa6.68□□□□□ -1.34
RPN11YFR004W BMH2P34730 273 aaKnown RBP6.68□□□□□ -1.34
RPN11YFR004W YHR219WP38900 624 aa6.68□□□□□ -1.34
RPN11YFR004W TVP23P38962 199 aa6.68□□□□□ -1.34
RPN11YFR004W CSM2P40465 213 aa6.68□□□□□ -1.34
RPN11YFR004W OYE3P41816 400 aaPredicted RBP6.68□□□□□ -1.34
RPN11YFR004W VID30P53076 958 aa6.68□□□□□ -1.34
RPN11YFR004W EMI2Q04409 500 aaKnown RBP6.68□□□□□ -1.34
RPN11YFR004W TMA16Q08687 178 aa6.68□□□□□ -1.34
RPN11YFR004W GET3Q12154 354 aaKnown RBP6.68□□□□□ -1.34
RPN11YFR004W ATG11Q12527 1178 aa6.68□□□□□ -1.34
RPN11YFR004W FKS1P38631 1876 aaKnown RBP6.67□□□□□ -1.34
RPN11YFR004W SPT2P06843 333 aaPredicted RBP6.67□□□□□ -1.34
RPN11YFR004W KEX2P13134 814 aa6.67□□□□□ -1.34
RPN11YFR004W RIT1P23796 513 aa6.67□□□□□ -1.34
RPN11YFR004W RDH54P38086 958 aa6.67□□□□□ -1.34
RPN11YFR004W PPX1P38698 397 aa6.67□□□□□ -1.34
RPN11YFR004W ALD5P40047 520 aaKnown RBP6.67□□□□□ -1.34
RPN11YFR004W SPO74P45819 413 aa6.67□□□□□ -1.34
RPN11YFR004W YGR035CP53222 116 aa6.67□□□□□ -1.34
RPN11YFR004W YNL034WP53963 612 aa6.67□□□□□ -1.34
RPN11YFR004W YNL018CP53976 612 aa6.67□□□□□ -1.34
RPN11YFR004W SUE1Q06524 206 aa6.67□□□□□ -1.34
RPN11YFR004W APL4Q12028 832 aa6.67□□□□□ -1.34
RPN11YFR004W SFI1Q12369 946 aa6.67□□□□□ -1.34
RPN11YFR004W YOR111WQ99210 232 aa6.67□□□□□ -1.34
RPN11YFR004W AFT1P22149 690 aa6.66□□□□□ -1.34
RPN11YFR004W JSN1P47135 1091 aaKnown RBP RIP-Chip data6.66□□□□□ -1.34not detected
RPN11YFR004W RPS7BP48164 190 aaKnown RBP6.66□□□□□ -1.34
RPN11YFR004W CTR1P49573 406 aa6.66□□□□□ -1.34
RPN11YFR004W LIF1P53150 421 aa6.66□□□□□ -1.34
RPN11YFR004W PTA1Q01329 785 aaPredicted RBP6.66□□□□□ -1.34
RPN11YFR004W AFT2Q08957 416 aa6.66□□□□□ -1.34
RPN11YFR004W CLF1Q12309 687 aaPredicted RBP6.66□□□□□ -1.34
RPN11YFR004W WHI5Q12416 295 aa6.66□□□□□ -1.34
RPN11YFR004W RKM4Q12504 494 aa6.66□□□□□ -1.34
RPN11YFR004W PHO87P25360 923 aa6.65□□□□□ -1.34
RPN11YFR004W URK1P27515 501 aa6.65□□□□□ -1.34
RPN11YFR004W RPL8BP29453 256 aaKnown RBP6.65□□□□□ -1.34
RPN11YFR004W RXT2P38255 430 aa6.65□□□□□ -1.34
RPN11YFR004W BOL3P39724 118 aa6.65□□□□□ -1.34
RPN11YFR004W FMP10P40098 244 aa6.65□□□□□ -1.34
RPN11YFR004W PCI8P40512 444 aa6.65□□□□□ -1.34
RPN11YFR004W INP51P40559 946 aaKnown RBP6.65□□□□□ -1.34
RPN11YFR004W TFG2P41896 400 aaPredicted RBP6.65□□□□□ -1.34
RPN11YFR004W INP52P50942 1183 aa6.65□□□□□ -1.34
Retrieved 100 of 5,963 RNA–protein pairs in 134.7 ms