RNA–Protein interactions for RNA: YDR440W

DOT1, Transcript of Nucleosomal histone H3-Lys79 methylase, yeast

Gene DOT1, Length 1,749 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DOT1	YDR440W	PRE10	P21242	288 aa	Known RBP RIP-Chip data	7.27	□□□□□ -1.25	not detected
DOT1	YDR440W	PCH2	P38126	564 aa		7.27	□□□□□ -1.25
DOT1	YDR440W	HMF1	P40037	129 aa	Known RBP	7.27	□□□□□ -1.25
DOT1	YDR440W	LCB2	P40970	561 aa		7.27	□□□□□ -1.25
DOT1	YDR440W	SVF1	Q05515	481 aa		7.27	□□□□□ -1.25
DOT1	YDR440W	GPI13	Q07830	1017 aa		7.27	□□□□□ -1.25
DOT1	YDR440W	FAL1	Q12099	399 aa	Known RBP	7.27	□□□□□ -1.25
DOT1	YDR440W	MAK16	P10962	306 aa	Predicted RBP	7.26	□□□□□ -1.25
DOT1	YDR440W	PCK1	P10963	549 aa		7.26	□□□□□ -1.25
DOT1	YDR440W	KIN82	P25341	720 aa		7.26	□□□□□ -1.25
DOT1	YDR440W	RGT1	P32862	1170 aa		7.26	□□□□□ -1.25
DOT1	YDR440W	MFT1	P33441	392 aa	Known RBP	7.26	□□□□□ -1.25
DOT1	YDR440W	SAD1	P43589	448 aa		7.26	□□□□□ -1.25
DOT1	YDR440W	VPS53	P47061	822 aa		7.26	□□□□□ -1.25
DOT1	YDR440W	HUL5	P53119	910 aa		7.26	□□□□□ -1.25
DOT1	YDR440W	TAM41	P53230	385 aa		7.26	□□□□□ -1.25
DOT1	YDR440W	CAF130	P53280	1122 aa	Predicted RBP	7.26	□□□□□ -1.25
DOT1	YDR440W	COQ9	Q05779	260 aa		7.26	□□□□□ -1.25
DOT1	YDR440W	COG4	Q06096	861 aa		7.26	□□□□□ -1.25
DOT1	YDR440W	DBP5	P20449	482 aa	Known RBP	7.25	□□□□□ -1.25
DOT1	YDR440W	NAM7	P30771	971 aa	Known RBP	7.25	□□□□□ -1.25
DOT1	YDR440W	YSC83	P32792	385 aa		7.25	□□□□□ -1.25
DOT1	YDR440W	MNN4	P36044	1178 aa		7.25	□□□□□ -1.25
DOT1	YDR440W	YEL025C	P39991	1188 aa		7.25	□□□□□ -1.25
DOT1	YDR440W	DUS1	P53759	423 aa	Known RBP	7.25	□□□□□ -1.25
DOT1	YDR440W	NOC3	Q07896	663 aa	Predicted RBP	7.25	□□□□□ -1.25
DOT1	YDR440W	MED1	Q12321	566 aa		7.25	□□□□□ -1.25
DOT1	YDR440W	VPS13	Q07878	3144 aa		7.24	□□□□□ -1.25
DOT1	YDR440W	POX1	P13711	748 aa		7.24	□□□□□ -1.25
DOT1	YDR440W	TUP1	P16649	713 aa		7.24	□□□□□ -1.25
DOT1	YDR440W	RRP43	P25359	394 aa	Predicted RBP	7.24	□□□□□ -1.25
DOT1	YDR440W	RPC53	P25441	422 aa		7.24	□□□□□ -1.25
DOT1	YDR440W	MRF1	P30775	413 aa	Predicted RBP	7.24	□□□□□ -1.25
DOT1	YDR440W	MXR1	P40029	184 aa		7.24	□□□□□ -1.25
DOT1	YDR440W	VFA1	P40080	203 aa		7.24	□□□□□ -1.25
DOT1	YDR440W	FYV8	P46949	817 aa	Known RBP	7.24	□□□□□ -1.25
DOT1	YDR440W	CCM1	P48237	864 aa	Predicted RBP	7.24	□□□□□ -1.25
DOT1	YDR440W	TAD1	P53065	400 aa		7.24	□□□□□ -1.25
DOT1	YDR440W	VID30	P53076	958 aa		7.24	□□□□□ -1.25
DOT1	YDR440W	UME1	Q03010	460 aa		7.24	□□□□□ -1.25
DOT1	YDR440W	CUR1	Q06469	252 aa		7.24	□□□□□ -1.25
DOT1	YDR440W	ATG9	Q12142	997 aa		7.24	□□□□□ -1.25
DOT1	YDR440W	PHO8	P11491	566 aa		7.24	□□□□□ -1.25
DOT1	YDR440W	SPO12	P17123	173 aa		7.24	□□□□□ -1.25
DOT1	YDR440W	IRE1	P32361	1115 aa		7.24	□□□□□ -1.25
DOT1	YDR440W	ATG19	P35193	415 aa		7.24	□□□□□ -1.25
DOT1	YDR440W	UBP13	P38187	747 aa		7.24	□□□□□ -1.25
DOT1	YDR440W	KSP1	P38691	1029 aa	Known RBP	7.24	□□□□□ -1.25
DOT1	YDR440W	OSW7	P43611	510 aa		7.24	□□□□□ -1.25
DOT1	YDR440W	BRE5	P53741	515 aa	Known RBP	7.24	□□□□□ -1.25
DOT1	YDR440W	MET7	Q08645	548 aa		7.24	□□□□□ -1.25
DOT1	YDR440W	HMI1	Q12039	706 aa		7.24	□□□□□ -1.25
DOT1	YDR440W	RRP6	Q12149	733 aa	Known RBP	7.24	□□□□□ -1.25
DOT1	YDR440W	YLL058W	Q12198	575 aa		7.24	□□□□□ -1.25
DOT1	YDR440W	PPR1	P07272	904 aa	Predicted RBP	7.23	□□□□□ -1.25
DOT1	YDR440W	SSB1	P11484	613 aa	Known RBP	7.23	□□□□□ -1.25
DOT1	YDR440W	MAS2	P11914	482 aa		7.23	□□□□□ -1.25
DOT1	YDR440W	DBP1	P24784	617 aa	Known RBP	7.23	□□□□□ -1.25
DOT1	YDR440W	BCS1	P32839	456 aa		7.23	□□□□□ -1.25
DOT1	YDR440W	EBP2	P36049	427 aa	Known RBP	7.23	□□□□□ -1.25
DOT1	YDR440W	AVT3	P36062	692 aa		7.23	□□□□□ -1.25
DOT1	YDR440W	EFM2	P38347	419 aa		7.23	□□□□□ -1.25
DOT1	YDR440W	SSB2	P40150	613 aa	Known RBP	7.23	□□□□□ -1.25
DOT1	YDR440W	SMC5	Q08204	1093 aa		7.23	□□□□□ -1.25
DOT1	YDR440W	IES4	Q08561	116 aa		7.23	□□□□□ -1.25
DOT1	YDR440W	CDC53	Q12018	815 aa	Known RBP	7.23	□□□□□ -1.25
DOT1	YDR440W	APL1	P27351	700 aa		7.22	□□□□□ -1.25
DOT1	YDR440W	COT1	P32798	439 aa		7.22	□□□□□ -1.25
DOT1	YDR440W	YKL023W	P36103	277 aa	Known RBP	7.22	□□□□□ -1.25
DOT1	YDR440W	EAF5	P39995	279 aa		7.22	□□□□□ -1.25
DOT1	YDR440W	ATG3	P40344	310 aa		7.22	□□□□□ -1.25
DOT1	YDR440W	ENV11	P53246	860 aa		7.22	□□□□□ -1.25
DOT1	YDR440W	RTT102	P53330	157 aa		7.22	□□□□□ -1.25
DOT1	YDR440W	YLR287C	Q05881	355 aa		7.22	□□□□□ -1.25
DOT1	YDR440W	EFT1	P32324	842 aa	Known RBP	7.21	□□□□□ -1.25
DOT1	YDR440W	XRS2	P33301	854 aa		7.21	□□□□□ -1.25
DOT1	YDR440W	CCC2	P38995	1004 aa		7.21	□□□□□ -1.25
DOT1	YDR440W	IES1	P43579	692 aa		7.21	□□□□□ -1.25
DOT1	YDR440W	YNL146W	P53906	100 aa		7.21	□□□□□ -1.25
DOT1	YDR440W	ERG5	P54781	538 aa		7.21	□□□□□ -1.25
DOT1	YDR440W	MLH2	Q07980	695 aa		7.21	□□□□□ -1.25
DOT1	YDR440W	SRF1	Q12516	437 aa		7.21	□□□□□ -1.25
DOT1	YDR440W	CHS2	P14180	963 aa		7.21	□□□□□ -1.26
DOT1	YDR440W	PDC6	P26263	563 aa	Known RBP	7.21	□□□□□ -1.26
DOT1	YDR440W	RME1	P32338	300 aa	Known RBP	7.21	□□□□□ -1.26
DOT1	YDR440W	KTR2	P33550	425 aa		7.21	□□□□□ -1.26
DOT1	YDR440W	AFG3	P39925	761 aa		7.21	□□□□□ -1.26
DOT1	YDR440W	SHQ1	P40486	507 aa	Predicted RBP	7.21	□□□□□ -1.26
DOT1	YDR440W	ACF4	P47129	309 aa		7.21	□□□□□ -1.26
DOT1	YDR440W	PSP2	P50109	593 aa	Known RBP	7.21	□□□□□ -1.26
DOT1	YDR440W	MDR1	P53258	950 aa		7.21	□□□□□ -1.26
DOT1	YDR440W	TIM8	P57744	87 aa		7.21	□□□□□ -1.26
DOT1	YDR440W	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	7.21	□□□□□ -1.26	not detected
DOT1	YDR440W	VTC3	Q02725	835 aa		7.21	□□□□□ -1.26
DOT1	YDR440W	YCG1	Q06680	1035 aa		7.21	□□□□□ -1.26
DOT1	YDR440W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	7.2	□□□□□ -1.26	not detected
DOT1	YDR440W	CDC11	P32458	415 aa		7.2	□□□□□ -1.26
DOT1	YDR440W	MUD1	P32605	298 aa	Known RBP	7.2	□□□□□ -1.26
DOT1	YDR440W	SMY2	P32909	740 aa	Known RBP	7.2	□□□□□ -1.26
DOT1	YDR440W	SEC9	P40357	651 aa		7.2	□□□□□ -1.26

Retrieved 100 of 5,963 RNA–protein pairs in 58.2 ms