RNA–Protein interactions for RNA: YDL088C

ASM4, Transcript of FG-nucleoporin component of central core of nuclear pore complex (NPC), yeastyeast

Gene ASM4, Length 1,587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ASM4YDL088C VPS16Q03308 798 aa4.54□□□□□ -1.68
ASM4YDL088C CDA1Q06702 301 aa4.54□□□□□ -1.68
ASM4YDL088C PIN2Q12057 282 aa4.54□□□□□ -1.68
ASM4YDL088C PMA1P05030 918 aaKnown RBP4.53□□□□□ -1.68
ASM4YDL088C SVF1Q05515 481 aa4.53□□□□□ -1.68
ASM4YDL088C DCG1P32460 244 aa4.53□□□□□ -1.69
ASM4YDL088C OPI10Q08202 246 aa4.53□□□□□ -1.69
ASM4YDL088C PPH3P32345 308 aa4.52□□□□□ -1.69
ASM4YDL088C CDC12P32468 407 aaKnown RBP4.52□□□□□ -1.69
ASM4YDL088C VBA5P36172 582 aa4.52□□□□□ -1.69
ASM4YDL088C CHA4P43634 648 aa4.52□□□□□ -1.69
ASM4YDL088C SFB2P53953 876 aa4.52□□□□□ -1.69
ASM4YDL088C YDR306CQ06640 478 aa4.52□□□□□ -1.69
ASM4YDL088C PFK1P16861 987 aaKnown RBP4.51□□□□□ -1.69
ASM4YDL088C AIM39Q08223 395 aa4.51□□□□□ -1.69
ASM4YDL088C ATG19P35193 415 aa4.5□□□□□ -1.69
ASM4YDL088C SHE9Q04172 456 aa4.5□□□□□ -1.69
ASM4YDL088C NPC2Q12408 173 aa4.5□□□□□ -1.69
ASM4YDL088C KCS1Q12494 1050 aa4.5□□□□□ -1.69
ASM4YDL088C CAD1P24813 409 aaKnown RBP4.49□□□□□ -1.69
ASM4YDL088C AAR2P32357 355 aaPredicted RBP4.49□□□□□ -1.69
ASM4YDL088C DEF1P35732 738 aaKnown RBP4.49□□□□□ -1.69
ASM4YDL088C VAC8P39968 578 aa4.49□□□□□ -1.69
ASM4YDL088C NPP2P39997 493 aa4.49□□□□□ -1.69
ASM4YDL088C YER158CP40095 573 aa4.49□□□□□ -1.69
ASM4YDL088C RPC82P32349 654 aa4.48□□□□□ -1.69
ASM4YDL088C YKL069WP36088 180 aa4.48□□□□□ -1.69
ASM4YDL088C MSS4P38994 779 aa4.48□□□□□ -1.69
ASM4YDL088C GYP7P48365 746 aa4.48□□□□□ -1.69
ASM4YDL088C EXG2P52911 562 aa4.48□□□□□ -1.69
ASM4YDL088C WHI4Q07655 649 aaKnown RBP4.48□□□□□ -1.69
ASM4YDL088C ADE8P04161 214 aa4.48□□□□□ -1.69
ASM4YDL088C HRR25P29295 494 aaKnown RBP4.48□□□□□ -1.69
ASM4YDL088C MRP8P35719 219 aa4.48□□□□□ -1.69
ASM4YDL088C SNU71P53207 620 aaKnown RBP4.48□□□□□ -1.69
ASM4YDL088C TPO2P53283 614 aa4.48□□□□□ -1.69
ASM4YDL088C CTF4Q01454 927 aa4.48□□□□□ -1.69
ASM4YDL088C KIN4Q01919 800 aa4.48□□□□□ -1.69
ASM4YDL088C GUS1P46655 708 aaKnown RBP RIP-Chip data4.47□□□□□ -1.69not detected
ASM4YDL088C RAI1P53063 387 aaKnown RBP4.47□□□□□ -1.69
ASM4YDL088C ALD6P54115 500 aaKnown RBP4.47□□□□□ -1.69
ASM4YDL088C CDC48P25694 835 aaKnown RBP4.46□□□□□ -1.7
ASM4YDL088C YRO2P38079 344 aa4.46□□□□□ -1.7
ASM4YDL088C URM1P40554 99 aaPredicted RBP4.46□□□□□ -1.7
ASM4YDL088C NCS6P53088 359 aa4.46□□□□□ -1.7
ASM4YDL088C SED4P25365 1065 aa4.45□□□□□ -1.7
ASM4YDL088C YKR078WP36158 585 aaKnown RBP4.45□□□□□ -1.7
ASM4YDL088C PBY1P38254 753 aa4.45□□□□□ -1.7
ASM4YDL088C SLI1P53304 468 aa4.45□□□□□ -1.7
ASM4YDL088C VPS30Q02948 557 aa4.45□□□□□ -1.7
ASM4YDL088C TDA5Q06417 326 aaKnown RBP4.45□□□□□ -1.7
ASM4YDL088C ENB1Q08299 606 aa4.45□□□□□ -1.7
ASM4YDL088C NOT3P06102 836 aaKnown RBP4.44□□□□□ -1.7
ASM4YDL088C TSL1P38427 1098 aaKnown RBP4.44□□□□□ -1.7
ASM4YDL088C KAR4P25583 335 aa4.44□□□□□ -1.7
ASM4YDL088C IRR1P40541 1150 aa4.44□□□□□ -1.7
ASM4YDL088C RFA1P22336 621 aaKnown RBP4.43□□□□□ -1.7
ASM4YDL088C CHS7P38843 316 aa4.43□□□□□ -1.7
ASM4YDL088C GUP2Q08929 609 aa4.43□□□□□ -1.7
ASM4YDL088C UPC2Q12151 913 aa4.43□□□□□ -1.7
ASM4YDL088C PRP9P19736 530 aaKnown RBP4.42□□□□□ -1.7
ASM4YDL088C NPP1P25353 742 aa4.42□□□□□ -1.7
ASM4YDL088C EFT1P32324 842 aaKnown RBP4.42□□□□□ -1.7
ASM4YDL088C TAD3Q9URQ3 322 aa4.42□□□□□ -1.7
ASM4YDL088C SUL1P38359 859 aa4.41□□□□□ -1.7
ASM4YDL088C SPF1P39986 1215 aaKnown RBP4.41□□□□□ -1.7
ASM4YDL088C YBR184WP38299 523 aa4.4□□□□□ -1.7
ASM4YDL088C CCM1P48237 864 aaPredicted RBP4.4□□□□□ -1.7
ASM4YDL088C GIS1Q03833 894 aa4.4□□□□□ -1.7
ASM4YDL088C WRS1Q12109 432 aaKnown RBP4.4□□□□□ -1.7
ASM4YDL088C SCT1P32784 759 aa4.4□□□□□ -1.71
ASM4YDL088C STE13P33894 931 aa4.4□□□□□ -1.71
ASM4YDL088C UBA2P52488 636 aa4.4□□□□□ -1.71
ASM4YDL088C SSL1Q04673 461 aaPredicted RBP4.4□□□□□ -1.71
ASM4YDL088C LAS17Q12446 633 aa4.4□□□□□ -1.71
ASM4YDL088C RAD53P22216 821 aa4.39□□□□□ -1.71
ASM4YDL088C CDC11P32458 415 aa4.39□□□□□ -1.71
ASM4YDL088C STE5P32917 917 aa4.39□□□□□ -1.71
ASM4YDL088C SIT1P39980 628 aa4.39□□□□□ -1.71
ASM4YDL088C YIL108WP40483 696 aaKnown RBP4.39□□□□□ -1.71
ASM4YDL088C CEP3P40969 608 aa4.39□□□□□ -1.71
ASM4YDL088C ALR2P43553 858 aa4.39□□□□□ -1.71
ASM4YDL088C YKE2P52553 114 aa4.39□□□□□ -1.71
ASM4YDL088C LCD1Q04377 747 aa4.39□□□□□ -1.71
ASM4YDL088C RPD3P32561 433 aa4.38□□□□□ -1.71
ASM4YDL088C AFR1P33304 620 aa4.38□□□□□ -1.71
ASM4YDL088C KTR4P38131 464 aa4.38□□□□□ -1.71
ASM4YDL088C YBR238CP38330 731 aaKnown RBP4.38□□□□□ -1.71
ASM4YDL088C YLR040CQ07988 224 aa4.38□□□□□ -1.71
ASM4YDL088C YOL073CQ08232 322 aa4.38□□□□□ -1.71
ASM4YDL088C PPM2Q08282 695 aa4.38□□□□□ -1.71
ASM4YDL088C RPS9AO13516 197 aaKnown RBP4.37□□□□□ -1.71
ASM4YDL088C ERG4P25340 473 aa4.37□□□□□ -1.71
ASM4YDL088C STE14P32584 239 aa4.37□□□□□ -1.71
ASM4YDL088C REC104P33323 182 aa4.37□□□□□ -1.71
ASM4YDL088C OAR1P35731 278 aa4.37□□□□□ -1.71
ASM4YDL088C ERT1P38140 529 aa4.37□□□□□ -1.71
ASM4YDL088C YBR284WP38150 797 aa4.37□□□□□ -1.71
ASM4YDL088C PEX19Q07418 342 aa4.37□□□□□ -1.71
ASM4YDL088C YPR071WQ12346 211 aa4.37□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 43.3 ms