RNA–Protein interactions for RNA: YDL053C

PBP4, Transcript of Pbp1p binding protein, yeastyeast

Gene PBP4, Length 558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PBP4YDL053C CDC11P32458 415 aa4.48□□□□□ -1.69
PBP4YDL053C SRP40P32583 406 aaPredicted RBP4.48□□□□□ -1.69
PBP4YDL053C SRP101P32916 621 aa4.48□□□□□ -1.69
PBP4YDL053C YKR078WP36158 585 aaKnown RBP4.48□□□□□ -1.69
PBP4YDL053C RSP5P39940 809 aaKnown RBP4.48□□□□□ -1.69
PBP4YDL053C ZRG8P40021 1076 aa4.48□□□□□ -1.69
PBP4YDL053C RIM8P53179 542 aa4.48□□□□□ -1.69
PBP4YDL053C NPL3Q01560 414 aaKnown RBP RIP-Chip data4.48□□□□□ -1.69 RIP-Chip
PBP4YDL053C GCN5Q03330 439 aa4.48□□□□□ -1.69
PBP4YDL053C TAF8Q03750 510 aa4.48□□□□□ -1.69
PBP4YDL053C SOD2P00447 233 aa4.47□□□□□ -1.69
PBP4YDL053C ENA1P13587 1091 aa4.47□□□□□ -1.69
PBP4YDL053C YKL091CP33324 310 aaKnown RBP4.47□□□□□ -1.69
PBP4YDL053C TOK1P40310 691 aa4.47□□□□□ -1.69
PBP4YDL053C MND2P40577 368 aa4.47□□□□□ -1.69
PBP4YDL053C IRC24P40580 263 aa4.47□□□□□ -1.69
PBP4YDL053C ENA2Q01896 1091 aa4.47□□□□□ -1.69
PBP4YDL053C LCD1Q04377 747 aa4.47□□□□□ -1.69
PBP4YDL053C DUS4Q06063 367 aa4.47□□□□□ -1.69
PBP4YDL053C YPR196WQ06595 470 aa4.47□□□□□ -1.69
PBP4YDL053C YPR071WQ12346 211 aa4.47□□□□□ -1.69
PBP4YDL053C ENA5Q12691 1091 aa4.47□□□□□ -1.69
PBP4YDL053C TOP3P13099 656 aa4.46□□□□□ -1.7
PBP4YDL053C MSD1P15179 658 aaKnown RBP4.46□□□□□ -1.7
PBP4YDL053C GAL11P19659 1081 aa4.46□□□□□ -1.7
PBP4YDL053C CDC48P25694 835 aaKnown RBP4.46□□□□□ -1.7
PBP4YDL053C RPC82P32349 654 aa4.46□□□□□ -1.7
PBP4YDL053C YBR238CP38330 731 aaKnown RBP4.46□□□□□ -1.7
PBP4YDL053C HUL4P40985 892 aa4.46□□□□□ -1.7
PBP4YDL053C SPT20P50875 604 aa4.46□□□□□ -1.7
PBP4YDL053C YKE2P52553 114 aa4.46□□□□□ -1.7
PBP4YDL053C YGR012WP53206 393 aa4.46□□□□□ -1.7
PBP4YDL053C GTF1P53260 183 aaPredicted RBP4.46□□□□□ -1.7
PBP4YDL053C CDA1Q06702 301 aa4.46□□□□□ -1.7
PBP4YDL053C YDL124WQ07551 312 aaKnown RBP4.46□□□□□ -1.7
PBP4YDL053C YOR131CQ12486 218 aa4.46□□□□□ -1.7
PBP4YDL053C YTA7P40340 1379 aa4.45□□□□□ -1.7
PBP4YDL053C CAN1P04817 590 aa4.45□□□□□ -1.7
PBP4YDL053C CDC6P09119 513 aa4.45□□□□□ -1.7
PBP4YDL053C TOD6P34219 525 aa4.45□□□□□ -1.7
PBP4YDL053C THI80P35202 319 aa4.45□□□□□ -1.7
PBP4YDL053C PET10P36139 283 aa4.45□□□□□ -1.7
PBP4YDL053C BET3P36149 193 aa4.45□□□□□ -1.7
PBP4YDL053C PBP2P38151 413 aaKnown RBP RIP-Chip data4.45□□□□□ -1.7not detected
PBP4YDL053C CCM1P48237 864 aaPredicted RBP4.45□□□□□ -1.7
PBP4YDL053C GCV2P49095 1034 aa4.45□□□□□ -1.7
PBP4YDL053C RTA1P53047 317 aa4.45□□□□□ -1.7
PBP4YDL053C PBP1P53297 722 aaKnown RBP4.45□□□□□ -1.7
PBP4YDL053C RPN4Q03465 531 aa4.45□□□□□ -1.7
PBP4YDL053C PPM2Q08282 695 aa4.45□□□□□ -1.7
PBP4YDL053C GPB1Q08886 897 aa4.45□□□□□ -1.7
PBP4YDL053C HSF1P10961 833 aa4.44□□□□□ -1.7
PBP4YDL053C SCT1P32784 759 aa4.44□□□□□ -1.7
PBP4YDL053C REC104P33323 182 aa4.44□□□□□ -1.7
PBP4YDL053C POA1P38218 177 aa4.44□□□□□ -1.7
PBP4YDL053C GGA2P38817 585 aaKnown RBP4.44□□□□□ -1.7
PBP4YDL053C UBP5P39944 805 aa4.44□□□□□ -1.7
PBP4YDL053C RXT3Q07458 294 aa4.44□□□□□ -1.7
PBP4YDL053C ADY3Q07732 790 aa4.44□□□□□ -1.7
PBP4YDL053C TPO1Q07824 586 aa4.44□□□□□ -1.7
PBP4YDL053C HMI1Q12039 706 aa4.44□□□□□ -1.7
PBP4YDL053C SPE1P08432 466 aa4.43□□□□□ -1.7
PBP4YDL053C CDC20P26309 610 aa4.43□□□□□ -1.7
PBP4YDL053C UBP6P43593 499 aaKnown RBP4.43□□□□□ -1.7
PBP4YDL053C VPS62P53285 467 aa4.43□□□□□ -1.7
PBP4YDL053C YAP6Q03935 383 aa4.43□□□□□ -1.7
PBP4YDL053C ACK1Q07622 623 aaPredicted RBP4.43□□□□□ -1.7
PBP4YDL053C NOT3P06102 836 aaKnown RBP4.42□□□□□ -1.7
PBP4YDL053C TOM70P07213 617 aaKnown RBP4.42□□□□□ -1.7
PBP4YDL053C EMC1P25574 760 aa4.42□□□□□ -1.7
PBP4YDL053C DOM34P33309 386 aa4.42□□□□□ -1.7
PBP4YDL053C BUD6P41697 788 aa4.42□□□□□ -1.7
PBP4YDL053C MET12P46151 657 aa4.42□□□□□ -1.7
PBP4YDL053C PSP2P50109 593 aaKnown RBP4.42□□□□□ -1.7
PBP4YDL053C RAI1P53063 387 aaKnown RBP4.42□□□□□ -1.7
PBP4YDL053C ERR1P0CX10 437 aa4.41□□□□□ -1.7
PBP4YDL053C ERR2P0CX11 437 aa4.41□□□□□ -1.7
PBP4YDL053C PRE10P21242 288 aaKnown RBP RIP-Chip data4.41□□□□□ -1.7not detected
PBP4YDL053C TIM23P32897 222 aa4.41□□□□□ -1.7
PBP4YDL053C CHZ1P40019 153 aaPredicted RBP4.41□□□□□ -1.7
PBP4YDL053C HIS5P07172 385 aa4.4□□□□□ -1.71
PBP4YDL053C CIT2P08679 460 aa4.4□□□□□ -1.71
PBP4YDL053C RFA1P22336 621 aaKnown RBP4.4□□□□□ -1.71
PBP4YDL053C STE13P33894 931 aa4.4□□□□□ -1.71
PBP4YDL053C ORC1P54784 914 aaPredicted RBP4.4□□□□□ -1.71
PBP4YDL053C NOP12Q08208 459 aaKnown RBP4.4□□□□□ -1.71
PBP4YDL053C ENV7Q12003 364 aa4.4□□□□□ -1.71
PBP4YDL053C FLR1P38124 548 aa4.39□□□□□ -1.71
PBP4YDL053C NUP82P40368 713 aa4.39□□□□□ -1.71
PBP4YDL053C YLR224WQ05947 369 aa4.39□□□□□ -1.71
PBP4YDL053C FPR4Q06205 392 aaPredicted RBP4.39□□□□□ -1.71
PBP4YDL053C WHI4Q07655 649 aaKnown RBP4.39□□□□□ -1.71
PBP4YDL053C YLR358CO13565 187 aa4.38□□□□□ -1.71
PBP4YDL053C RPP2AP05319 106 aaKnown RBP4.38□□□□□ -1.71
PBP4YDL053C MPH2P0CD99 609 aa4.38□□□□□ -1.71
PBP4YDL053C URA1P28272 314 aaPredicted RBP4.38□□□□□ -1.71
PBP4YDL053C ATG19P35193 415 aa4.38□□□□□ -1.71
PBP4YDL053C EMC3P36039 253 aa4.38□□□□□ -1.71
PBP4YDL053C GYP8P43570 497 aa4.38□□□□□ -1.71
PBP4YDL053C ALG2P43636 503 aa4.38□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 39.8 ms