RNA–Protein interactions for RNA: YDL053C

PBP4, Transcript of Pbp1p binding protein, yeastyeast

Gene PBP4, Length 558 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PBP4YDL053C MTC1P47018 478 aaKnown RBP11.46□□□□□ -0.57
PBP4YDL053C DRS1P32892 752 aaKnown RBP11.31□□□□□ -0.6
PBP4YDL053C FAP1P53971 965 aa10.75□□□□□ -0.69
PBP4YDL053C PRY3P47033 881 aa10.18□□□□□ -0.78
PBP4YDL053C BFR2Q06631 534 aaKnown RBP9.7□□□□□ -0.86
PBP4YDL053C DIP2Q12220 943 aaPredicted RBP9.68□□□□□ -0.86
PBP4YDL053C AVT3P36062 692 aa9.52□□□□□ -0.89
PBP4YDL053C HAA1Q12753 694 aaKnown RBP9.5□□□□□ -0.89
PBP4YDL053C YCK3P39962 524 aa9.45□□□□□ -0.9
PBP4YDL053C ISW2Q08773 1120 aa9.35□□□□□ -0.91
PBP4YDL053C PRI1P10363 409 aa9.31□□□□□ -0.92
PBP4YDL053C RPG1P38249 964 aaKnown RBP9.24□□□□□ -0.93
PBP4YDL053C RSE1Q04693 1361 aaKnown RBP9.2□□□□□ -0.94
PBP4YDL053C AAD16Q02895 342 aa9.16□□□□□ -0.94
PBP4YDL053C TFA1P36100 482 aa8.98□□□□□ -0.97
PBP4YDL053C RPL17AP05740 184 aaKnown RBP8.88□□□□□ -0.99
PBP4YDL053C RPL17BP46990 184 aaKnown RBP8.88□□□□□ -0.99
PBP4YDL053C TSR3Q12094 313 aaKnown RBP8.84□□□□□ -0.99
PBP4YDL053C REB1P21538 810 aa8.77□□□□□ -1.01
PBP4YDL053C BUD31P25337 157 aaPredicted RBP8.73□□□□□ -1.01
PBP4YDL053C SPT21P35209 758 aa8.54□□□□□ -1.04
PBP4YDL053C MRPL32P25348 183 aa8.47□□□□□ -1.05
PBP4YDL053C RIM101P33400 625 aa8.37□□□□□ -1.07
PBP4YDL053C YGL015CP33199 130 aa8.36□□□□□ -1.07
PBP4YDL053C YKR023WP36119 530 aaKnown RBP8.3□□□□□ -1.08
PBP4YDL053C CDC27P38042 758 aa8.18□□□□□ -1.1
PBP4YDL053C HOP09932 586 aa8.13□□□□□ -1.11
PBP4YDL053C TFC8Q12308 588 aa8.13□□□□□ -1.11
PBP4YDL053C OXP1P28273 1286 aa8.11□□□□□ -1.11
PBP4YDL053C DCD1P06773 312 aa8.09□□□□□ -1.11
PBP4YDL053C SIS1P25294 352 aaKnown RBP8.08□□□□□ -1.12
PBP4YDL053C YIL055CP40523 627 aaKnown RBP7.98□□□□□ -1.13
PBP4YDL053C PTP3P40048 928 aa7.96□□□□□ -1.14
PBP4YDL053C YAH1Q12184 172 aaKnown RBP7.96□□□□□ -1.14
PBP4YDL053C SSP1P38871 571 aa7.91□□□□□ -1.14
PBP4YDL053C BCH2P36122 765 aa7.88□□□□□ -1.15
PBP4YDL053C RSM7P47150 247 aa7.86□□□□□ -1.15
PBP4YDL053C UBP10P53874 792 aaPredicted RBP7.86□□□□□ -1.15
PBP4YDL053C MAP2P38174 421 aaKnown RBP7.85□□□□□ -1.15
PBP4YDL053C YLR271WQ06152 274 aa7.85□□□□□ -1.15
PBP4YDL053C SCY1P53009 804 aa7.8□□□□□ -1.16
PBP4YDL053C ARP8Q12386 881 aaKnown RBP RIP-Chip data7.79□□□□□ -1.16not detected
PBP4YDL053C AI2P03876 854 aa7.75□□□□□ -1.17
PBP4YDL053C EPS1P40557 701 aa7.74□□□□□ -1.17
PBP4YDL053C BBC1P47068 1157 aa7.7□□□□□ -1.18
PBP4YDL053C BDF1P35817 686 aa7.68□□□□□ -1.18
PBP4YDL053C SLX5P32828 619 aaKnown RBP7.66□□□□□ -1.18
PBP4YDL053C PSD2P53037 1138 aaKnown RBP7.66□□□□□ -1.18
PBP4YDL053C MGA2P40578 1113 aa7.64□□□□□ -1.19
PBP4YDL053C CST9Q06032 482 aa7.61□□□□□ -1.19
PBP4YDL053C UBP9P39967 754 aa7.59□□□□□ -1.19
PBP4YDL053C TIF4632P39936 914 aaKnown RBP7.52□□□□□ -1.21
PBP4YDL053C MRM1P25270 412 aa7.5□□□□□ -1.21
PBP4YDL053C TGL3P40308 642 aa7.47□□□□□ -1.21
PBP4YDL053C RTG3P38165 486 aa7.38□□□□□ -1.23
PBP4YDL053C RCR1P38212 213 aa7.37□□□□□ -1.23
PBP4YDL053C RQC2Q12532 1038 aaKnown RBP7.36□□□□□ -1.23
PBP4YDL053C NSR1P27476 414 aaKnown RBP RIP-Chip data7.35□□□□□ -1.23not detected
PBP4YDL053C VPS29P38759 282 aa7.32□□□□□ -1.24
PBP4YDL053C DMA1P38823 416 aa7.32□□□□□ -1.24
PBP4YDL053C RAM2P29703 316 aa7.3□□□□□ -1.24
PBP4YDL053C YAP5P40574 245 aa7.29□□□□□ -1.24
PBP4YDL053C YMR1P47147 688 aaKnown RBP RIP-Chip data7.27□□□□□ -1.25not detected
PBP4YDL053C YOR238WQ08634 303 aa7.27□□□□□ -1.25
PBP4YDL053C MST1P07236 462 aa7.23□□□□□ -1.25
PBP4YDL053C DBP1P24784 617 aaKnown RBP7.23□□□□□ -1.25
PBP4YDL053C STS1P38637 319 aa7.23□□□□□ -1.25
PBP4YDL053C YFR006WP43590 535 aa7.22□□□□□ -1.25
PBP4YDL053C PIB1Q06651 286 aa7.22□□□□□ -1.25
PBP4YDL053C MAK11P20484 414 aaKnown RBP7.2□□□□□ -1.26
PBP4YDL053C GTT3P39996 337 aa7.12□□□□□ -1.27
PBP4YDL053C VMA1P17255 1071 aaKnown RBP7.1□□□□□ -1.27
PBP4YDL053C COQ8P27697 501 aa7.1□□□□□ -1.27
PBP4YDL053C MIF2P35201 549 aa7.09□□□□□ -1.27
PBP4YDL053C EDS1P38073 919 aa7.08□□□□□ -1.28
PBP4YDL053C SET1P38827 1080 aaKnown RBP7.08□□□□□ -1.28
PBP4YDL053C SAM3Q08986 587 aa7.04□□□□□ -1.28
PBP4YDL053C WSC3Q12215 556 aa7.03□□□□□ -1.28
PBP4YDL053C YBL029C-AQ3E756 94 aa7.03□□□□□ -1.28
PBP4YDL053C PTC3P34221 468 aaKnown RBP7.02□□□□□ -1.29
PBP4YDL053C NOP53Q12080 455 aaKnown RBP7.01□□□□□ -1.29
PBP4YDL053C YOL036WQ08206 761 aa7□□□□□ -1.29
PBP4YDL053C SAS10Q12136 610 aaPredicted RBP6.99□□□□□ -1.29
PBP4YDL053C VNX1P42839 908 aa6.98□□□□□ -1.29
PBP4YDL053C SET4P42948 560 aa6.98□□□□□ -1.29
PBP4YDL053C YPR148CQ06523 435 aa6.97□□□□□ -1.29
PBP4YDL053C GYP5Q12344 894 aa6.97□□□□□ -1.29
PBP4YDL053C IFH1P39520 1085 aa6.96□□□□□ -1.3
PBP4YDL053C GRE2Q12068 342 aaKnown RBP6.96□□□□□ -1.3
PBP4YDL053C MSB4Q12317 492 aa6.96□□□□□ -1.3
PBP4YDL053C ATH1P48016 1211 aa6.94□□□□□ -1.3
PBP4YDL053C TIF11P38912 153 aaKnown RBP6.92□□□□□ -1.3
PBP4YDL053C VPS70P47161 811 aa6.92□□□□□ -1.3
PBP4YDL053C SPP1Q03012 353 aa6.92□□□□□ -1.3
PBP4YDL053C RGA2Q06407 1009 aa6.92□□□□□ -1.3
PBP4YDL053C ABP1P15891 592 aaKnown RBP6.91□□□□□ -1.3
PBP4YDL053C GUT1P32190 709 aa6.91□□□□□ -1.3
PBP4YDL053C DCW1P36091 449 aa6.91□□□□□ -1.3
PBP4YDL053C EAP1P36041 632 aaKnown RBP6.89□□□□□ -1.31
PBP4YDL053C HTA1P04911 132 aaKnown RBP6.88□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 89.5 ms