RNA–Protein interactions for RNA: YBR161W

CSH1, Transcript of Mannosylinositol phosphorylceramide (MIPC) synthase catalytic subunit, yeast

Gene CSH1, Length 1,131 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CSH1	YBR161W	YKR078W	P36158	585 aa	Known RBP	5.77	□□□□□ -1.49
CSH1	YBR161W	ERT1	P38140	529 aa		5.77	□□□□□ -1.49
CSH1	YBR161W	TSL1	P38427	1098 aa	Known RBP	5.77	□□□□□ -1.49
CSH1	YBR161W	SFB2	P53953	876 aa		5.77	□□□□□ -1.49
CSH1	YBR161W	ENA2	Q01896	1091 aa		5.77	□□□□□ -1.49
CSH1	YBR161W	ROT1	Q03691	256 aa		5.77	□□□□□ -1.49
CSH1	YBR161W	ENA5	Q12691	1091 aa		5.77	□□□□□ -1.49
CSH1	YBR161W	TOM70	P07213	617 aa	Known RBP	5.76	□□□□□ -1.49
CSH1	YBR161W	MSD1	P15179	658 aa	Known RBP	5.76	□□□□□ -1.49
CSH1	YBR161W	CDC48	P25694	835 aa	Known RBP	5.76	□□□□□ -1.49
CSH1	YBR161W	AFR1	P33304	620 aa		5.76	□□□□□ -1.49
CSH1	YBR161W	CHZ1	P40019	153 aa	Predicted RBP	5.76	□□□□□ -1.49
CSH1	YBR161W	OSW7	P43611	510 aa		5.76	□□□□□ -1.49
CSH1	YBR161W	CCM1	P48237	864 aa	Predicted RBP	5.76	□□□□□ -1.49
CSH1	YBR161W	ORC1	P54784	914 aa	Predicted RBP	5.76	□□□□□ -1.49
CSH1	YBR161W	TOP3	P13099	656 aa		5.75	□□□□□ -1.49
CSH1	YBR161W	SRM1	P21827	482 aa		5.75	□□□□□ -1.49
CSH1	YBR161W	RPC82	P32349	654 aa		5.75	□□□□□ -1.49
CSH1	YBR161W	TIM23	P32897	222 aa		5.75	□□□□□ -1.49
CSH1	YBR161W	SRP101	P32916	621 aa		5.75	□□□□□ -1.49
CSH1	YBR161W	PET10	P36139	283 aa		5.75	□□□□□ -1.49
CSH1	YBR161W	ECM21	P38167	1117 aa	Known RBP	5.75	□□□□□ -1.49
CSH1	YBR161W	ZRG8	P40021	1076 aa		5.75	□□□□□ -1.49
CSH1	YBR161W	TOK1	P40310	691 aa		5.75	□□□□□ -1.49
CSH1	YBR161W	DOM34	P33309	386 aa		5.74	□□□□□ -1.49
CSH1	YBR161W	REC104	P33323	182 aa		5.74	□□□□□ -1.49
CSH1	YBR161W	BET3	P36149	193 aa		5.74	□□□□□ -1.49
CSH1	YBR161W	LAM1	P38851	1228 aa		5.74	□□□□□ -1.49
CSH1	YBR161W	RTA1	P53047	317 aa		5.74	□□□□□ -1.49
CSH1	YBR161W	GTF1	P53260	183 aa	Predicted RBP	5.74	□□□□□ -1.49
CSH1	YBR161W	PPM2	Q08282	695 aa		5.74	□□□□□ -1.49
CSH1	YBR161W	RNQ1	P25367	405 aa		5.73	□□□□□ -1.49
CSH1	YBR161W	TSA1	P34760	196 aa	Known RBP	5.73	□□□□□ -1.49
CSH1	YBR161W	AIM3	P38266	947 aa	Known RBP	5.73	□□□□□ -1.49
CSH1	YBR161W	NIT1	P40447	199 aa		5.73	□□□□□ -1.49
CSH1	YBR161W	UBP6	P43593	499 aa	Known RBP	5.73	□□□□□ -1.49
CSH1	YBR161W	YGR012W	P53206	393 aa		5.73	□□□□□ -1.49
CSH1	YBR161W	PBP1	P53297	722 aa	Known RBP	5.73	□□□□□ -1.49
CSH1	YBR161W	BUL2	Q03758	920 aa	Known RBP	5.73	□□□□□ -1.49
CSH1	YBR161W	CDA2	Q06703	312 aa		5.73	□□□□□ -1.49
CSH1	YBR161W	RPS13	P05756	151 aa	Known RBP	5.72	□□□□□ -1.49
CSH1	YBR161W	ERR1	P0CX10	437 aa		5.72	□□□□□ -1.49
CSH1	YBR161W	ERR2	P0CX11	437 aa		5.72	□□□□□ -1.49
CSH1	YBR161W	ELM1	P32801	640 aa		5.72	□□□□□ -1.49
CSH1	YBR161W	NUP82	P40368	713 aa		5.72	□□□□□ -1.49
CSH1	YBR161W	MND2	P40577	368 aa		5.72	□□□□□ -1.49
CSH1	YBR161W	BUD6	P41697	788 aa		5.72	□□□□□ -1.49
CSH1	YBR161W	PLB2	Q03674	706 aa		5.72	□□□□□ -1.49
CSH1	YBR161W	CIT2	P08679	460 aa		5.71	□□□□□ -1.5
CSH1	YBR161W	HSF1	P10961	833 aa		5.71	□□□□□ -1.5
CSH1	YBR161W	MEF2	P39677	819 aa		5.71	□□□□□ -1.5
CSH1	YBR161W	PSP2	P50109	593 aa	Known RBP	5.71	□□□□□ -1.5
CSH1	YBR161W	SPT20	P50875	604 aa		5.71	□□□□□ -1.5
CSH1	YBR161W	GCN5	Q03330	439 aa		5.71	□□□□□ -1.5
CSH1	YBR161W	RFA1	P22336	621 aa	Known RBP	5.7	□□□□□ -1.5
CSH1	YBR161W	POA1	P38218	177 aa		5.7	□□□□□ -1.5
CSH1	YBR161W	YBR238C	P38330	731 aa	Known RBP	5.7	□□□□□ -1.5
CSH1	YBR161W	YKE2	P52553	114 aa		5.7	□□□□□ -1.5
CSH1	YBR161W	CDA1	Q06702	301 aa		5.7	□□□□□ -1.5
CSH1	YBR161W	GPB1	Q08886	897 aa		5.7	□□□□□ -1.5
CSH1	YBR161W	YLR125W	Q12138	136 aa		5.7	□□□□□ -1.5
CSH1	YBR161W	NOT3	P06102	836 aa	Known RBP	5.69	□□□□□ -1.5
CSH1	YBR161W	PHO8	P11491	566 aa		5.69	□□□□□ -1.5
CSH1	YBR161W	GCV2	P49095	1034 aa		5.69	□□□□□ -1.5
CSH1	YBR161W	NIT3	P49954	291 aa		5.69	□□□□□ -1.5
CSH1	YBR161W	RAI1	P53063	387 aa	Known RBP	5.69	□□□□□ -1.5
CSH1	YBR161W	RIM8	P53179	542 aa		5.69	□□□□□ -1.5
CSH1	YBR161W	VPS30	Q02948	557 aa		5.69	□□□□□ -1.5
CSH1	YBR161W	YDR132C	Q03900	495 aa		5.69	□□□□□ -1.5
CSH1	YBR161W	RXT3	Q07458	294 aa		5.69	□□□□□ -1.5
CSH1	YBR161W	YPL277C	Q08989	487 aa		5.69	□□□□□ -1.5
CSH1	YBR161W	SOD2	P00447	233 aa		5.68	□□□□□ -1.5
CSH1	YBR161W	SPE1	P08432	466 aa		5.68	□□□□□ -1.5
CSH1	YBR161W	PPG1	P32838	368 aa		5.68	□□□□□ -1.5
CSH1	YBR161W	ALG2	P43636	503 aa		5.68	□□□□□ -1.5
CSH1	YBR161W	TPO1	Q07824	586 aa		5.68	□□□□□ -1.5
CSH1	YBR161W	RPP2A	P05319	106 aa	Known RBP	5.67	□□□□□ -1.5
CSH1	YBR161W	PRP6	P19735	899 aa	Predicted RBP	5.67	□□□□□ -1.5
CSH1	YBR161W	TOD6	P34219	525 aa		5.67	□□□□□ -1.5
CSH1	YBR161W	HSV2	P50079	448 aa	Predicted RBP	5.67	□□□□□ -1.5
CSH1	YBR161W	DUS4	Q06063	367 aa		5.67	□□□□□ -1.5
CSH1	YBR161W	ENV7	Q12003	364 aa		5.67	□□□□□ -1.5
CSH1	YBR161W	PHR1	P05066	565 aa	Known RBP RIP-Chip data	5.66	□□□□□ -1.5	not detected
CSH1	YBR161W	MPH2	P0CD99	609 aa		5.66	□□□□□ -1.5
CSH1	YBR161W	EMC1	P25574	760 aa		5.66	□□□□□ -1.5
CSH1	YBR161W	THI4	P32318	326 aa		5.66	□□□□□ -1.5
CSH1	YBR161W	RNH70	P53331	553 aa		5.66	□□□□□ -1.5
CSH1	YBR161W	ACK1	Q07622	623 aa	Predicted RBP	5.66	□□□□□ -1.5
CSH1	YBR161W	RPS9A	O13516	197 aa	Known RBP	5.65	□□□□□ -1.5
CSH1	YBR161W	URA1	P28272	314 aa	Predicted RBP	5.65	□□□□□ -1.5
CSH1	YBR161W	GDH3	P39708	457 aa		5.65	□□□□□ -1.5
CSH1	YBR161W	CEP3	P40969	608 aa		5.65	□□□□□ -1.5
CSH1	YBR161W	GYP8	P43570	497 aa		5.65	□□□□□ -1.5
CSH1	YBR161W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	5.65	□□□□□ -1.5	not detected
CSH1	YBR161W	YAP6	Q03935	383 aa		5.65	□□□□□ -1.5
CSH1	YBR161W	ADY3	Q07732	790 aa		5.65	□□□□□ -1.5
CSH1	YBR161W	HMI1	Q12039	706 aa		5.65	□□□□□ -1.5
CSH1	YBR161W	MET6	P05694	767 aa	Known RBP	5.64	□□□□□ -1.51
CSH1	YBR161W	CDC6	P09119	513 aa		5.64	□□□□□ -1.51
CSH1	YBR161W	STE13	P33894	931 aa		5.64	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 46.4 ms