RNA–Protein interactions for RNA: YBR161W

CSH1, Transcript of Mannosylinositol phosphorylceramide (MIPC) synthase catalytic subunit, yeastyeast

Gene CSH1, Length 1,131 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSH1YBR161W MTC1P47018 478 aaKnown RBP14.41□□□□□ -0.1
CSH1YBR161W DRS1P32892 752 aaKnown RBP14.37□□□□□ -0.11
CSH1YBR161W BFR2Q06631 534 aaKnown RBP12.38□□□□□ -0.43
CSH1YBR161W DIP2Q12220 943 aaPredicted RBP12.25□□□□□ -0.45
CSH1YBR161W FAP1P53971 965 aa12.04□□□□□ -0.48
CSH1YBR161W AVT3P36062 692 aa12.02□□□□□ -0.49
CSH1YBR161W ISW2Q08773 1120 aa11.78□□□□□ -0.52
CSH1YBR161W PRI1P10363 409 aa11.63□□□□□ -0.55
CSH1YBR161W RPG1P38249 964 aaKnown RBP11.61□□□□□ -0.55
CSH1YBR161W RSE1Q04693 1361 aaKnown RBP11.61□□□□□ -0.55
CSH1YBR161W TFA1P36100 482 aa11.49□□□□□ -0.57
CSH1YBR161W AAD16Q02895 342 aa11.46□□□□□ -0.57
CSH1YBR161W PRY3P47033 881 aa11.26□□□□□ -0.61
CSH1YBR161W RPL17AP05740 184 aaKnown RBP11.2□□□□□ -0.62
CSH1YBR161W RPL17BP46990 184 aaKnown RBP11.2□□□□□ -0.62
CSH1YBR161W REB1P21538 810 aa11.1□□□□□ -0.63
CSH1YBR161W TSR3Q12094 313 aaKnown RBP11.06□□□□□ -0.64
CSH1YBR161W SPT21P35209 758 aa10.72□□□□□ -0.69
CSH1YBR161W MRPL32P25348 183 aa10.64□□□□□ -0.71
CSH1YBR161W HAA1Q12753 694 aaKnown RBP10.57□□□□□ -0.72
CSH1YBR161W RIM101P33400 625 aa10.54□□□□□ -0.72
CSH1YBR161W YCK3P39962 524 aa10.54□□□□□ -0.72
CSH1YBR161W YKR023WP36119 530 aaKnown RBP10.4□□□□□ -0.74
CSH1YBR161W HOP09932 586 aa10.23□□□□□ -0.77
CSH1YBR161W CDC27P38042 758 aa10.23□□□□□ -0.77
CSH1YBR161W OXP1P28273 1286 aa10.2□□□□□ -0.78
CSH1YBR161W TFC8Q12308 588 aa10.2□□□□□ -0.78
CSH1YBR161W DCD1P06773 312 aa10.17□□□□□ -0.78
CSH1YBR161W PTP3P40048 928 aa10.17□□□□□ -0.78
CSH1YBR161W YIL055CP40523 627 aaKnown RBP10.13□□□□□ -0.79
CSH1YBR161W YAH1Q12184 172 aaKnown RBP10.12□□□□□ -0.79
CSH1YBR161W SSP1P38871 571 aa10.05□□□□□ -0.8
CSH1YBR161W YGL015CP33199 130 aa9.93□□□□□ -0.82
CSH1YBR161W RSM7P47150 247 aa9.93□□□□□ -0.82
CSH1YBR161W ARP8Q12386 881 aaKnown RBP RIP-Chip data9.93□□□□□ -0.82not detected
CSH1YBR161W YLR271WQ06152 274 aa9.91□□□□□ -0.82
CSH1YBR161W BCH2P36122 765 aa9.9□□□□□ -0.82
CSH1YBR161W UBP10P53874 792 aaPredicted RBP9.84□□□□□ -0.83
CSH1YBR161W MAP2P38174 421 aaKnown RBP9.83□□□□□ -0.84
CSH1YBR161W SCY1P53009 804 aa9.82□□□□□ -0.84
CSH1YBR161W AI2P03876 854 aa9.78□□□□□ -0.84
CSH1YBR161W BBC1P47068 1157 aa9.77□□□□□ -0.85
CSH1YBR161W EPS1P40557 701 aa9.75□□□□□ -0.85
CSH1YBR161W MGA2P40578 1113 aa9.7□□□□□ -0.86
CSH1YBR161W BDF1P35817 686 aa9.66□□□□□ -0.86
CSH1YBR161W PSD2P53037 1138 aaKnown RBP9.66□□□□□ -0.86
CSH1YBR161W RQC2Q12532 1038 aaKnown RBP9.65□□□□□ -0.86
CSH1YBR161W SLX5P32828 619 aaKnown RBP9.64□□□□□ -0.87
CSH1YBR161W CST9Q06032 482 aa9.63□□□□□ -0.87
CSH1YBR161W MRM1P25270 412 aa9.49□□□□□ -0.89
CSH1YBR161W TIF4632P39936 914 aaKnown RBP9.47□□□□□ -0.89
CSH1YBR161W DMA1P38823 416 aa9.43□□□□□ -0.9
CSH1YBR161W TGL3P40308 642 aa9.35□□□□□ -0.91
CSH1YBR161W RTG3P38165 486 aa9.34□□□□□ -0.91
CSH1YBR161W RCR1P38212 213 aa9.3□□□□□ -0.92
CSH1YBR161W BUD31P25337 157 aaPredicted RBP9.24□□□□□ -0.93
CSH1YBR161W RAM2P29703 316 aa9.23□□□□□ -0.93
CSH1YBR161W VPS29P38759 282 aa9.21□□□□□ -0.94
CSH1YBR161W NSR1P27476 414 aaKnown RBP RIP-Chip data9.2□□□□□ -0.94not detected
CSH1YBR161W YAP5P40574 245 aa9.19□□□□□ -0.94
CSH1YBR161W YMR1P47147 688 aaKnown RBP RIP-Chip data9.18□□□□□ -0.94not detected
CSH1YBR161W YOR238WQ08634 303 aa9.17□□□□□ -0.94
CSH1YBR161W MAK11P20484 414 aaKnown RBP9.13□□□□□ -0.95
CSH1YBR161W DBP1P24784 617 aaKnown RBP9.12□□□□□ -0.95
CSH1YBR161W YFR006WP43590 535 aa9.12□□□□□ -0.95
CSH1YBR161W PIB1Q06651 286 aa9.12□□□□□ -0.95
CSH1YBR161W STS1P38637 319 aa9.11□□□□□ -0.95
CSH1YBR161W MST1P07236 462 aa9.02□□□□□ -0.97
CSH1YBR161W SET1P38827 1080 aaKnown RBP9.02□□□□□ -0.97
CSH1YBR161W MIF2P35201 549 aa9.01□□□□□ -0.97
CSH1YBR161W COQ8P27697 501 aa9□□□□□ -0.97
CSH1YBR161W GTT3P39996 337 aa9□□□□□ -0.97
CSH1YBR161W VMA1P17255 1071 aaKnown RBP8.95□□□□□ -0.98
CSH1YBR161W EDS1P38073 919 aa8.92□□□□□ -0.98
CSH1YBR161W SAS10Q12136 610 aaPredicted RBP8.92□□□□□ -0.98
CSH1YBR161W IFH1P39520 1085 aa8.89□□□□□ -0.99
CSH1YBR161W PTC3P34221 468 aaKnown RBP8.87□□□□□ -0.99
CSH1YBR161W NOP53Q12080 455 aaKnown RBP8.87□□□□□ -0.99
CSH1YBR161W WSC3Q12215 556 aa8.86□□□□□ -0.99
CSH1YBR161W UBP9P39967 754 aa8.85□□□□□ -0.99
CSH1YBR161W VPS70P47161 811 aa8.84□□□□□ -0.99
CSH1YBR161W YPR148CQ06523 435 aa8.84□□□□□ -0.99
CSH1YBR161W SAM3Q08986 587 aa8.84□□□□□ -0.99
CSH1YBR161W YBL029C-AQ3E756 94 aa8.82□□□□□ -1
CSH1YBR161W YOL036WQ08206 761 aa8.81□□□□□ -1
CSH1YBR161W GRE2Q12068 342 aaKnown RBP8.81□□□□□ -1
CSH1YBR161W SET4P42948 560 aa8.8□□□□□ -1
CSH1YBR161W ATH1P48016 1211 aa8.8□□□□□ -1
CSH1YBR161W GYP5Q12344 894 aa8.8□□□□□ -1
CSH1YBR161W MSB4Q12317 492 aa8.76□□□□□ -1.01
CSH1YBR161W GUT1P32190 709 aa8.75□□□□□ -1.01
CSH1YBR161W CKB1P43639 278 aa8.75□□□□□ -1.01
CSH1YBR161W ABP1P15891 592 aaKnown RBP8.74□□□□□ -1.01
CSH1YBR161W VNX1P42839 908 aa8.74□□□□□ -1.01
CSH1YBR161W DCW1P36091 449 aa8.72□□□□□ -1.01
CSH1YBR161W SPP1Q03012 353 aa8.7□□□□□ -1.02
CSH1YBR161W HTA1P04911 132 aaKnown RBP8.69□□□□□ -1.02
CSH1YBR161W HTA2P04912 132 aa8.69□□□□□ -1.02
CSH1YBR161W EAP1P36041 632 aaKnown RBP8.69□□□□□ -1.02
CSH1YBR161W TIF11P38912 153 aaKnown RBP8.67□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 47.3 ms