RNA–Protein interactions for RNA: YBL017C

PEP1, Transcript of Type I transmembrane sorting receptor for multiple vacuolar hydrolases, yeastyeast

Gene PEP1, Length 4,740 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP1YBL017C CDC42P19073 191 aa2.09□□□□□ -2.08
PEP1YBL017C SRP101P32916 621 aa2.09□□□□□ -2.08
PEP1YBL017C RPT3P33298 428 aaKnown RBP2.09□□□□□ -2.08
PEP1YBL017C FUI1P38196 639 aa2.09□□□□□ -2.08
PEP1YBL017C FTH1P38310 465 aa2.09□□□□□ -2.08
PEP1YBL017C HXT13P39924 564 aa2.09□□□□□ -2.08
PEP1YBL017C TMA108P40462 946 aa2.09□□□□□ -2.08
PEP1YBL017C YJL049WP47048 450 aa2.09□□□□□ -2.08
PEP1YBL017C HXT17P53631 564 aa2.09□□□□□ -2.08
PEP1YBL017C HST1P53685 503 aa2.09□□□□□ -2.08
PEP1YBL017C SLG1P54867 378 aa2.09□□□□□ -2.08
PEP1YBL017C SLT2Q00772 484 aa2.09□□□□□ -2.08
PEP1YBL017C MSC2Q03455 724 aa2.09□□□□□ -2.08
PEP1YBL017C MRN1Q08925 612 aaKnown RBP RIP-Chip data2.09□□□□□ -2.08not detected
PEP1YBL017C PDC1P06169 563 aaKnown RBP2.09□□□□□ -2.08
PEP1YBL017C ADE3P07245 946 aaKnown RBP2.09□□□□□ -2.08
PEP1YBL017C ISW1P38144 1129 aa2.09□□□□□ -2.08
PEP1YBL017C MET13P53128 600 aa2.09□□□□□ -2.08
PEP1YBL017C RSC1P53236 928 aa2.09□□□□□ -2.08
PEP1YBL017C ARK1P53974 638 aa2.09□□□□□ -2.08
PEP1YBL017C YDR341CQ05506 607 aaKnown RBP2.09□□□□□ -2.08
PEP1YBL017C UTP4Q06679 776 aaKnown RBP2.09□□□□□ -2.08
PEP1YBL017C CLP1Q08685 445 aaPredicted RBP2.09□□□□□ -2.08
PEP1YBL017C GFA1P14742 717 aaKnown RBP2.08□□□□□ -2.08
PEP1YBL017C SPO11P23179 398 aa2.08□□□□□ -2.08
PEP1YBL017C RAD55P38953 406 aa2.08□□□□□ -2.08
PEP1YBL017C VTC2P43585 828 aa2.08□□□□□ -2.08
PEP1YBL017C DOT1Q04089 582 aaKnown RBP2.08□□□□□ -2.08
PEP1YBL017C APM4Q99186 491 aa2.08□□□□□ -2.08
PEP1YBL017C HAP2P06774 265 aa2.08□□□□□ -2.08
PEP1YBL017C SRD1P09007 221 aa2.08□□□□□ -2.08
PEP1YBL017C HOP09932 586 aa2.08□□□□□ -2.08
PEP1YBL017C PHO8P11491 566 aa2.08□□□□□ -2.08
PEP1YBL017C STM1P39015 273 aaKnown RBP2.08□□□□□ -2.08
PEP1YBL017C AIP1P46680 615 aaKnown RBP2.08□□□□□ -2.08
PEP1YBL017C CTF18P49956 741 aa2.08□□□□□ -2.08
PEP1YBL017C AZR1P50080 613 aa2.08□□□□□ -2.08
PEP1YBL017C YGL039WP53183 348 aaKnown RBP2.08□□□□□ -2.08
PEP1YBL017C ZPR1P53303 486 aaKnown RBP2.08□□□□□ -2.08
PEP1YBL017C SPP1Q03012 353 aa2.08□□□□□ -2.08
PEP1YBL017C JIP4Q03361 876 aa2.08□□□□□ -2.08
PEP1YBL017C NAT1P12945 854 aaKnown RBP2.08□□□□□ -2.08
PEP1YBL017C PGM2P37012 569 aaKnown RBP2.08□□□□□ -2.08
PEP1YBL017C REG2P38232 338 aa2.08□□□□□ -2.08
PEP1YBL017C AKR1P39010 764 aa2.08□□□□□ -2.08
PEP1YBL017C YNL058CP53947 316 aa2.08□□□□□ -2.08
PEP1YBL017C SGT2Q12118 346 aaKnown RBP2.08□□□□□ -2.08
PEP1YBL017C AIM7Q12156 149 aa2.08□□□□□ -2.08
PEP1YBL017C HIF1Q12373 385 aa2.08□□□□□ -2.08
PEP1YBL017C YDL206WQ12424 762 aa2.08□□□□□ -2.08
PEP1YBL017C CIT2P08679 460 aa2.08□□□□□ -2.08
PEP1YBL017C SWI6P09959 803 aa2.08□□□□□ -2.08
PEP1YBL017C THR4P16120 514 aaKnown RBP2.08□□□□□ -2.08
PEP1YBL017C IRE1P32361 1115 aa2.08□□□□□ -2.08
PEP1YBL017C RAD54P32863 898 aa2.08□□□□□ -2.08
PEP1YBL017C SMY2P32909 740 aaKnown RBP2.08□□□□□ -2.08
PEP1YBL017C LCB2P40970 561 aa2.08□□□□□ -2.08
PEP1YBL017C CIT3P43635 486 aa2.08□□□□□ -2.08
PEP1YBL017C RPS0BP46654 252 aaKnown RBP2.08□□□□□ -2.08
PEP1YBL017C YDL057WQ07379 328 aa2.08□□□□□ -2.08
PEP1YBL017C YOR296WQ08748 1289 aa2.08□□□□□ -2.08
PEP1YBL017C SAM1P10659 382 aaKnown RBP2.07□□□□□ -2.08
PEP1YBL017C BEM3P32873 1128 aa2.07□□□□□ -2.08
PEP1YBL017C MAL33P38157 468 aa2.07□□□□□ -2.08
PEP1YBL017C CIR1P42940 261 aa2.07□□□□□ -2.08
PEP1YBL017C SET2P46995 733 aaKnown RBP2.07□□□□□ -2.08
PEP1YBL017C ZAP1P47043 880 aa2.07□□□□□ -2.08
PEP1YBL017C YJR107WP47145 328 aa2.07□□□□□ -2.08
PEP1YBL017C YKE2P52553 114 aa2.07□□□□□ -2.08
PEP1YBL017C ESF2P53743 316 aaKnown RBP2.07□□□□□ -2.08
PEP1YBL017C RTC4P53850 401 aa2.07□□□□□ -2.08
PEP1YBL017C SGD1Q06132 899 aa2.07□□□□□ -2.08
PEP1YBL017C BSP1Q06604 576 aa2.07□□□□□ -2.08
PEP1YBL017C DED1P06634 604 aaKnown RBP2.07□□□□□ -2.08
PEP1YBL017C CLN3P13365 580 aa2.07□□□□□ -2.08
PEP1YBL017C SLA1P32790 1244 aa2.07□□□□□ -2.08
PEP1YBL017C SLA2P33338 968 aa2.07□□□□□ -2.08
PEP1YBL017C SUL1P38359 859 aa2.07□□□□□ -2.08
PEP1YBL017C VPS8P39702 1274 aa2.07□□□□□ -2.08
PEP1YBL017C PHO86P46956 311 aa2.07□□□□□ -2.08
PEP1YBL017C VPS53P47061 822 aa2.07□□□□□ -2.08
PEP1YBL017C ATH1P48016 1211 aa2.07□□□□□ -2.08
PEP1YBL017C MTO1P53070 669 aa2.07□□□□□ -2.08
PEP1YBL017C NOP13P53883 403 aaKnown RBP RIP-Chip data2.07□□□□□ -2.08not detected
PEP1YBL017C RPL22BP56628 122 aaKnown RBP2.07□□□□□ -2.08
PEP1YBL017C HPF1Q05164 967 aa2.07□□□□□ -2.08
PEP1YBL017C NEW1Q08972 1196 aaKnown RBP2.07□□□□□ -2.08
PEP1YBL017C FAL1Q12099 399 aaKnown RBP2.07□□□□□ -2.08
PEP1YBL017C RTP1Q12751 981 aa2.07□□□□□ -2.08
PEP1YBL017C KEX1P09620 729 aa2.07□□□□□ -2.08
PEP1YBL017C ABD1P32783 436 aaPredicted RBP2.07□□□□□ -2.08
PEP1YBL017C XRS2P33301 854 aa2.07□□□□□ -2.08
PEP1YBL017C RPN10P38886 268 aaKnown RBP2.07□□□□□ -2.08
PEP1YBL017C JHD1P40034 492 aa2.07□□□□□ -2.08
PEP1YBL017C DSE1P40077 573 aa2.07□□□□□ -2.08
PEP1YBL017C PSP1P50896 841 aaKnown RBP2.07□□□□□ -2.08
PEP1YBL017C TAM41P53230 385 aa2.07□□□□□ -2.08
PEP1YBL017C YNR021WP53723 404 aaKnown RBP2.07□□□□□ -2.08
PEP1YBL017C GRX8Q05926 109 aa2.07□□□□□ -2.08
PEP1YBL017C KRS1P15180 591 aaKnown RBP2.06□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 42.8 ms