RNA–Protein interactions for RNA: YBL017C

PEP1, Transcript of Type I transmembrane sorting receptor for multiple vacuolar hydrolases, yeastyeast

Gene PEP1, Length 4,740 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEP1YBL017C MON2P48563 1636 aaPredicted RBP4.87□□□□□ -1.63
PEP1YBL017C TY1B-DR4Q07793 1604 aa4.79□□□□□ -1.64
PEP1YBL017C INO80P53115 1489 aa4.64□□□□□ -1.67
PEP1YBL017C TCB3Q03640 1545 aaKnown RBP4.59□□□□□ -1.67
PEP1YBL017C SWR1Q05471 1514 aa4.53□□□□□ -1.68
PEP1YBL017C HSL1P34244 1518 aa4.39□□□□□ -1.71
PEP1YBL017C KOG1P38873 1557 aa4.38□□□□□ -1.71
PEP1YBL017C THO2P53552 1597 aaKnown RBP4.38□□□□□ -1.71
PEP1YBL017C SIN3P22579 1536 aa4.37□□□□□ -1.71
PEP1YBL017C SSK2P53599 1579 aa4.36□□□□□ -1.71
PEP1YBL017C PEP1P32319 1579 aa4.3□□□□□ -1.72
PEP1YBL017C HIR3P47171 1648 aa4.29□□□□□ -1.72
PEP1YBL017C SPA2P23201 1466 aaKnown RBP4.28□□□□□ -1.72
PEP1YBL017C SGS1P35187 1447 aa4.27□□□□□ -1.73
PEP1YBL017C DNA2P38859 1522 aa4.27□□□□□ -1.73
PEP1YBL017C ATG2P53855 1592 aa4.26□□□□□ -1.73
PEP1YBL017C SPT6P23615 1451 aaKnown RBP4.23□□□□□ -1.73
PEP1YBL017C ESP1Q03018 1630 aa4.16□□□□□ -1.74
PEP1YBL017C TY1B-BRQ12193 1756 aa4.14□□□□□ -1.75
PEP1YBL017C TY1B-GR3Q12316 1755 aa4.14□□□□□ -1.75
PEP1YBL017C TY1B-ORQ92393 1755 aa4.14□□□□□ -1.75
PEP1YBL017C TY2B-LR1P0C2J3 1770 aa4.14□□□□□ -1.75
PEP1YBL017C TY2B-FP0CX63 1770 aa4.14□□□□□ -1.75
PEP1YBL017C TY2B-GR2P0CX64 1770 aa4.14□□□□□ -1.75
PEP1YBL017C TY2B-CP25384 1770 aa4.14□□□□□ -1.75
PEP1YBL017C TY2B-DR2Q03494 1770 aa4.14□□□□□ -1.75
PEP1YBL017C TY1B-DR1Q03855 1755 aa4.14□□□□□ -1.75
PEP1YBL017C TY2B-DR3Q07791 1770 aaKnown RBP4.14□□□□□ -1.75
PEP1YBL017C TY2B-OR1Q12113 1770 aa4.14□□□□□ -1.75
PEP1YBL017C TY2B-DR1Q12472 1770 aa4.14□□□□□ -1.75
PEP1YBL017C TY2B-OR2Q12501 1770 aa4.14□□□□□ -1.75
PEP1YBL017C TY1B-HO13535 1793 aa4.11□□□□□ -1.75
PEP1YBL017C TY1B-DR5P0C2I2 1755 aa4.11□□□□□ -1.75
PEP1YBL017C TY1B-DR6P0C2I3 1755 aa4.11□□□□□ -1.75
PEP1YBL017C TY1B-LR2P0C2I5 1755 aa4.11□□□□□ -1.75
PEP1YBL017C TY1B-LR3P0C2I6 1755 aaKnown RBP4.11□□□□□ -1.75
PEP1YBL017C TY1B-PR1P0C2I9 1755 aaKnown RBP4.11□□□□□ -1.75
PEP1YBL017C TY1B-PR2P0C2J0 1756 aa4.11□□□□□ -1.75
PEP1YBL017C TY1B-PR3P0C2J1 1755 aaKnown RBP4.11□□□□□ -1.75
PEP1YBL017C TY1B-JR1P47098 1755 aa4.11□□□□□ -1.75
PEP1YBL017C TY1B-ML2Q03434 1755 aaKnown RBP4.11□□□□□ -1.75
PEP1YBL017C TY1B-ER1Q03612 1755 aa4.11□□□□□ -1.75
PEP1YBL017C TY1B-ML1Q04711 1755 aaKnown RBP4.11□□□□□ -1.75
PEP1YBL017C TY1B-GR2Q12269 1755 aa4.11□□□□□ -1.75
PEP1YBL017C TY1B-OLQ12273 1755 aa4.11□□□□□ -1.75
PEP1YBL017C TY1B-PLQ12414 1755 aaKnown RBP4.11□□□□□ -1.75
PEP1YBL017C TY1B-DR3Q99231 1755 aa4.11□□□□□ -1.75
PEP1YBL017C REV3P14284 1504 aa4.11□□□□□ -1.75
PEP1YBL017C XRN1P22147 1528 aaKnown RBP4.1□□□□□ -1.75
PEP1YBL017C MDS3P53094 1487 aa4.1□□□□□ -1.75
PEP1YBL017C TY2B-BQ12491 1770 aa4.1□□□□□ -1.75
PEP1YBL017C SSN2P38931 1420 aa4.08□□□□□ -1.76
PEP1YBL017C BUD4P47136 1447 aa4.07□□□□□ -1.76
PEP1YBL017C MYO2P19524 1574 aaKnown RBP4.07□□□□□ -1.76
PEP1YBL017C YPK9Q12697 1472 aa4.03□□□□□ -1.76
PEP1YBL017C RPA190P10964 1664 aaKnown RBP4.01□□□□□ -1.77
PEP1YBL017C TY1B-JR2P47100 1755 aaKnown RBP4□□□□□ -1.77
PEP1YBL017C TY1B-ER2Q03619 1755 aa4□□□□□ -1.77
PEP1YBL017C TY1B-MR1Q04214 1755 aa4□□□□□ -1.77
PEP1YBL017C TY1B-MR2Q04670 1755 aaKnown RBP4□□□□□ -1.77
PEP1YBL017C TY1B-LR1Q12088 1755 aaKnown RBP4□□□□□ -1.77
PEP1YBL017C TY1B-NL1Q12112 1755 aa4□□□□□ -1.77
PEP1YBL017C TY1B-GR1Q12141 1755 aa4□□□□□ -1.77
PEP1YBL017C TY1B-BLQ12490 1755 aa4□□□□□ -1.77
PEP1YBL017C RPO31P04051 1460 aa3.99□□□□□ -1.77
PEP1YBL017C YCF1P39109 1515 aaKnown RBP3.97□□□□□ -1.77
PEP1YBL017C SCC2Q04002 1493 aa3.97□□□□□ -1.77
PEP1YBL017C RPO21P04050 1733 aaKnown RBP3.95□□□□□ -1.78
PEP1YBL017C ECM5Q03214 1411 aa3.94□□□□□ -1.78
PEP1YBL017C NTE1Q04958 1679 aa3.94□□□□□ -1.78
PEP1YBL017C CDC25P04821 1589 aa3.93□□□□□ -1.78
PEP1YBL017C BPT1P14772 1559 aa3.93□□□□□ -1.78
PEP1YBL017C ESC1Q03661 1658 aaKnown RBP3.91□□□□□ -1.78
PEP1YBL017C POL1P13382 1468 aa3.9□□□□□ -1.78
PEP1YBL017C YRF1-1P0CX20 1796 aa3.9□□□□□ -1.78
PEP1YBL017C YRF1-5P0CX21 1796 aa3.9□□□□□ -1.78
PEP1YBL017C YRF1-8P0CX22 1796 aa3.9□□□□□ -1.78
PEP1YBL017C CHD1P32657 1468 aa3.9□□□□□ -1.79
PEP1YBL017C MLP2P40457 1679 aa3.9□□□□□ -1.79
PEP1YBL017C RKR1Q04781 1562 aa3.88□□□□□ -1.79
PEP1YBL017C IRC20Q06554 1556 aa3.85□□□□□ -1.79
PEP1YBL017C YOR1P53049 1477 aa3.85□□□□□ -1.79
PEP1YBL017C BNI1P41832 1953 aa3.83□□□□□ -1.8
PEP1YBL017C SPO14P36126 1683 aa3.83□□□□□ -1.8
PEP1YBL017C SMC4Q12267 1418 aa3.83□□□□□ -1.8
PEP1YBL017C DNF1P32660 1571 aa3.82□□□□□ -1.8
PEP1YBL017C MET5P47169 1442 aa3.82□□□□□ -1.8
PEP1YBL017C TOP2P06786 1428 aaKnown RBP3.82□□□□□ -1.8
PEP1YBL017C MYO4P32492 1471 aa3.82□□□□□ -1.8
PEP1YBL017C ULS1Q08562 1619 aa3.8□□□□□ -1.8
PEP1YBL017C HAP1P0CE41 1502 aa3.8□□□□□ -1.8
PEP1YBL017C PDR10P51533 1564 aa3.8□□□□□ -1.8
PEP1YBL017C STU1P38198 1513 aa3.79□□□□□ -1.8
PEP1YBL017C PDR12Q02785 1511 aa3.79□□□□□ -1.8
PEP1YBL017C DOP1Q03921 1698 aa3.78□□□□□ -1.8
PEP1YBL017C CHC1P22137 1653 aaKnown RBP3.78□□□□□ -1.81
PEP1YBL017C PAN1P32521 1480 aa3.77□□□□□ -1.81
PEP1YBL017C SNQ2P32568 1501 aaKnown RBP3.77□□□□□ -1.81
PEP1YBL017C NUP170P38181 1502 aa3.76□□□□□ -1.81
PEP1YBL017C YBT1P32386 1661 aa3.76□□□□□ -1.81
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms