RNA–Protein interactions for RNA: tP(UGG)A

TRN1, Transcript of Proline tRNA (tRNA-Pro), predicted by tRNAscan-SE analysis, yeastyeast

Gene TRN1, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRN1tP(UGG)A YLL058WQ12198 575 aa17.44■□□□□ 0.38
TRN1tP(UGG)A RPL22AP05749 121 aaKnown RBP17.43■□□□□ 0.38
TRN1tP(UGG)A PRP22P24384 1145 aaKnown RBP17.43■□□□□ 0.38
TRN1tP(UGG)A TVP38P36164 337 aa17.43■□□□□ 0.38
TRN1tP(UGG)A NPR3P38742 1146 aa17.43■□□□□ 0.38
TRN1tP(UGG)A FIS1P40515 155 aa17.43■□□□□ 0.38
TRN1tP(UGG)A ULP1Q02724 621 aa17.43■□□□□ 0.38
TRN1tP(UGG)A YOR131CQ12486 218 aa17.43■□□□□ 0.38
TRN1tP(UGG)A PDC1P06169 563 aaKnown RBP17.42■□□□□ 0.38
TRN1tP(UGG)A CDC48P25694 835 aaKnown RBP17.42■□□□□ 0.38
TRN1tP(UGG)A RAM2P29703 316 aa17.42■□□□□ 0.38
TRN1tP(UGG)A VTC2P43585 828 aa17.42■□□□□ 0.38
TRN1tP(UGG)A YJR107WP47145 328 aa17.42■□□□□ 0.38
TRN1tP(UGG)A ISY1P21374 235 aaPredicted RBP17.41■□□□□ 0.38
TRN1tP(UGG)A DBP1P24784 617 aaKnown RBP17.41■□□□□ 0.38
TRN1tP(UGG)A PAH1P32567 862 aa17.41■□□□□ 0.38
TRN1tP(UGG)A BCS1P32839 456 aa17.41■□□□□ 0.38
TRN1tP(UGG)A TIM23P32897 222 aa17.41■□□□□ 0.38
TRN1tP(UGG)A FLR1P38124 548 aa17.41■□□□□ 0.38
TRN1tP(UGG)A GUP1P53154 560 aa17.41■□□□□ 0.38
TRN1tP(UGG)A GPI13Q07830 1017 aa17.41■□□□□ 0.38
TRN1tP(UGG)A MOT1P32333 1867 aa17.41■□□□□ 0.38
TRN1tP(UGG)A PFK1P16861 987 aaKnown RBP17.4■□□□□ 0.38
TRN1tP(UGG)A PRY3P47033 881 aa17.4■□□□□ 0.38
TRN1tP(UGG)A SUT2Q12286 268 aa17.4■□□□□ 0.38
TRN1tP(UGG)A MAS2P11914 482 aa17.39■□□□□ 0.37
TRN1tP(UGG)A MIP1P15801 1254 aa17.39■□□□□ 0.37
TRN1tP(UGG)A RPN3P40016 523 aaKnown RBP17.39■□□□□ 0.37
TRN1tP(UGG)A NUP82P40368 713 aa17.39■□□□□ 0.37
TRN1tP(UGG)A PPS1P38148 807 aa17.38■□□□□ 0.37
TRN1tP(UGG)A YEL025CP39991 1188 aa17.38■□□□□ 0.37
TRN1tP(UGG)A FYV10P40492 516 aa17.38■□□□□ 0.37
TRN1tP(UGG)A GPT2P36148 743 aa17.37■□□□□ 0.37
TRN1tP(UGG)A RRM3P38766 723 aa17.37■□□□□ 0.37
TRN1tP(UGG)A NOC2P39744 710 aaKnown RBP17.37■□□□□ 0.37
TRN1tP(UGG)A SKP2P42843 763 aa17.37■□□□□ 0.37
TRN1tP(UGG)A TLG2Q08144 397 aa17.37■□□□□ 0.37
TRN1tP(UGG)A NCR1Q12200 1170 aa17.37■□□□□ 0.37
TRN1tP(UGG)A VPS62P53285 467 aa17.36■□□□□ 0.37
TRN1tP(UGG)A AFG3P39925 761 aa17.35■□□□□ 0.37
TRN1tP(UGG)A PSP2P50109 593 aaKnown RBP17.35■□□□□ 0.37
TRN1tP(UGG)A TCP1P12612 559 aaKnown RBP17.34■□□□□ 0.37
TRN1tP(UGG)A GSY2P27472 705 aa17.34■□□□□ 0.37
TRN1tP(UGG)A KSP1P38691 1029 aaKnown RBP17.34■□□□□ 0.37
TRN1tP(UGG)A MDR1P53258 950 aa17.34■□□□□ 0.37
TRN1tP(UGG)A NCS2P53923 493 aaPredicted RBP17.34■□□□□ 0.37
TRN1tP(UGG)A SMC5Q08204 1093 aa17.34■□□□□ 0.37
TRN1tP(UGG)A AFT2Q08957 416 aa17.34■□□□□ 0.37
TRN1tP(UGG)A MAM3Q12296 706 aa17.34■□□□□ 0.37
TRN1tP(UGG)A IRE1P32361 1115 aa17.33■□□□□ 0.36
TRN1tP(UGG)A RKM3P38222 552 aa17.33■□□□□ 0.36
TRN1tP(UGG)A KIN82P25341 720 aa17.32■□□□□ 0.36
TRN1tP(UGG)A KNS1P32350 737 aaPredicted RBP17.32■□□□□ 0.36
TRN1tP(UGG)A RSC1P53236 928 aa17.32■□□□□ 0.36
TRN1tP(UGG)A DAK1P54838 584 aaKnown RBP17.32■□□□□ 0.36
TRN1tP(UGG)A YDL057WQ07379 328 aa17.32■□□□□ 0.36
TRN1tP(UGG)A YPL216WQ08964 1102 aa17.32■□□□□ 0.36
TRN1tP(UGG)A MDM20Q12387 796 aaKnown RBP17.32■□□□□ 0.36
TRN1tP(UGG)A DED1P06634 604 aaKnown RBP17.31■□□□□ 0.36
TRN1tP(UGG)A ATG19P35193 415 aa17.31■□□□□ 0.36
TRN1tP(UGG)A LSC2P53312 427 aa17.31■□□□□ 0.36
TRN1tP(UGG)A SEC5P89102 971 aa17.31■□□□□ 0.36
TRN1tP(UGG)A TFC8Q12308 588 aa17.31■□□□□ 0.36
TRN1tP(UGG)A ATE1P16639 503 aa17.3■□□□□ 0.36
TRN1tP(UGG)A PGM2P37012 569 aaKnown RBP17.3■□□□□ 0.36
TRN1tP(UGG)A TOF1P53840 1238 aa17.3■□□□□ 0.36
TRN1tP(UGG)A SSL2Q00578 843 aa17.3■□□□□ 0.36
TRN1tP(UGG)A NOC3Q07896 663 aaPredicted RBP17.3■□□□□ 0.36
TRN1tP(UGG)A SNA3P14359 133 aa17.29■□□□□ 0.36
TRN1tP(UGG)A DBP5P20449 482 aaKnown RBP17.29■□□□□ 0.36
TRN1tP(UGG)A PAM1P37304 830 aaKnown RBP17.29■□□□□ 0.36
TRN1tP(UGG)A LDH1P38139 375 aa17.29■□□□□ 0.36
TRN1tP(UGG)A ARK1P53974 638 aa17.29■□□□□ 0.36
TRN1tP(UGG)A ROD1Q02805 837 aa17.29■□□□□ 0.36
TRN1tP(UGG)A MSC2Q03455 724 aa17.29■□□□□ 0.36
TRN1tP(UGG)A RTP1Q12751 981 aa17.29■□□□□ 0.36
TRN1tP(UGG)A RIF1P29539 1916 aa17.29■□□□□ 0.36
TRN1tP(UGG)A ERC1P38767 581 aa17.28■□□□□ 0.36
TRN1tP(UGG)A EAF5P39995 279 aa17.28■□□□□ 0.36
TRN1tP(UGG)A AVT1P47082 602 aa17.28■□□□□ 0.36
TRN1tP(UGG)A SPP382Q06411 708 aaPredicted RBP17.28■□□□□ 0.36
TRN1tP(UGG)A ATG11Q12527 1178 aa17.28■□□□□ 0.36
TRN1tP(UGG)A SMY2P32909 740 aaKnown RBP17.27■□□□□ 0.36
TRN1tP(UGG)A YKL091CP33324 310 aaKnown RBP17.27■□□□□ 0.36
TRN1tP(UGG)A BIM1P40013 344 aa17.27■□□□□ 0.36
TRN1tP(UGG)A AIM21P40563 679 aa17.27■□□□□ 0.36
TRN1tP(UGG)A YFL034WP43564 1073 aa17.27■□□□□ 0.36
TRN1tP(UGG)A COQ9Q05779 260 aa17.27■□□□□ 0.36
TRN1tP(UGG)A RPC53P25441 422 aa17.26■□□□□ 0.35
TRN1tP(UGG)A PSO2P30620 661 aa17.26■□□□□ 0.35
TRN1tP(UGG)A RME1P32338 300 aaKnown RBP17.26■□□□□ 0.35
TRN1tP(UGG)A UIP5P36137 443 aa17.26■□□□□ 0.35
TRN1tP(UGG)A YGR237CP50089 785 aa17.26■□□□□ 0.35
TRN1tP(UGG)A HCR1Q05775 265 aaKnown RBP17.26■□□□□ 0.35
TRN1tP(UGG)A YPL277CQ08989 487 aa17.26■□□□□ 0.35
TRN1tP(UGG)A OM45P16547 393 aa17.25■□□□□ 0.35
TRN1tP(UGG)A CLC1P17891 233 aa17.25■□□□□ 0.35
TRN1tP(UGG)A UBC1P21734 215 aaKnown RBP17.25■□□□□ 0.35
TRN1tP(UGG)A EFT1P32324 842 aaKnown RBP17.25■□□□□ 0.35
TRN1tP(UGG)A KTR2P33550 425 aa17.25■□□□□ 0.35
Retrieved 100 of 5,963 RNA–protein pairs in 119.4 ms