RNA–Protein interactions for RNA: YPR029C

APL4, Transcript of Gamma-adaptin, yeast

Gene APL4, Length 2,499 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
APL4	YPR029C	SYF1	Q04048	859 aa	Predicted RBP	4.12	□□□□□ -1.75
APL4	YPR029C	YPR109W	Q06104	294 aa		4.12	□□□□□ -1.75
APL4	YPR029C	GIC2	Q06648	383 aa		4.12	□□□□□ -1.75
APL4	YPR029C	NOC3	Q07896	663 aa	Predicted RBP	4.12	□□□□□ -1.75
APL4	YPR029C	AEP2	P22136	580 aa		4.11	□□□□□ -1.75
APL4	YPR029C	NPL6	P32832	435 aa		4.11	□□□□□ -1.75
APL4	YPR029C	BEM3	P32873	1128 aa		4.11	□□□□□ -1.75
APL4	YPR029C	DUT1	P33317	147 aa		4.11	□□□□□ -1.75
APL4	YPR029C	MIC60	P36112	540 aa		4.11	□□□□□ -1.75
APL4	YPR029C	FAA3	P39002	694 aa		4.11	□□□□□ -1.75
APL4	YPR029C	YMR124W	P39523	943 aa	Known RBP	4.11	□□□□□ -1.75
APL4	YPR029C	GDH3	P39708	457 aa		4.11	□□□□□ -1.75
APL4	YPR029C	ARB1	P40024	610 aa	Known RBP	4.11	□□□□□ -1.75
APL4	YPR029C	TGL3	P40308	642 aa		4.11	□□□□□ -1.75
APL4	YPR029C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
APL4	YPR029C	ROG3	P43602	733 aa		4.11	□□□□□ -1.75
APL4	YPR029C	DUG1	P43616	481 aa	Known RBP	4.11	□□□□□ -1.75
APL4	YPR029C	RTA1	P53047	317 aa		4.11	□□□□□ -1.75
APL4	YPR029C	SFB2	P53953	876 aa		4.11	□□□□□ -1.75
APL4	YPR029C	RSC4	Q02206	625 aa		4.11	□□□□□ -1.75
APL4	YPR029C	TDA9	Q04545	1251 aa		4.11	□□□□□ -1.75
APL4	YPR029C	YDL124W	Q07551	312 aa	Known RBP	4.11	□□□□□ -1.75
APL4	YPR029C	RTT10	Q08924	1013 aa		4.11	□□□□□ -1.75
APL4	YPR029C	SAN1	P22470	610 aa		4.11	□□□□□ -1.75
APL4	YPR029C	EFB1	P32471	206 aa	Known RBP	4.11	□□□□□ -1.75
APL4	YPR029C	TFB1	P32776	642 aa		4.11	□□□□□ -1.75
APL4	YPR029C	NOP16	P40007	231 aa	Known RBP	4.11	□□□□□ -1.75
APL4	YPR029C	AXL1	P40851	1208 aa		4.11	□□□□□ -1.75
APL4	YPR029C	YFR006W	P43590	535 aa		4.11	□□□□□ -1.75
APL4	YPR029C	SAP155	P43612	1002 aa		4.11	□□□□□ -1.75
APL4	YPR029C	RAD17	P48581	401 aa		4.11	□□□□□ -1.75
APL4	YPR029C	VID30	P53076	958 aa		4.11	□□□□□ -1.75
APL4	YPR029C	NPY1	P53164	384 aa		4.11	□□□□□ -1.75
APL4	YPR029C	HOP2	P53187	214 aa		4.11	□□□□□ -1.75
APL4	YPR029C	NNF2	P53253	936 aa		4.11	□□□□□ -1.75
APL4	YPR029C	RAT1	Q02792	1006 aa	Known RBP	4.11	□□□□□ -1.75
APL4	YPR029C	TAF11	Q04226	346 aa		4.11	□□□□□ -1.75
APL4	YPR029C	YKU80	Q04437	629 aa		4.11	□□□□□ -1.75
APL4	YPR029C	COG8	Q04632	607 aa		4.11	□□□□□ -1.75
APL4	YPR029C	ARP9	Q05123	467 aa		4.11	□□□□□ -1.75
APL4	YPR029C	GGA1	Q06336	557 aa		4.11	□□□□□ -1.75
APL4	YPR029C	PDX1	P16451	410 aa		4.1	□□□□□ -1.75
APL4	YPR029C	PDI1	P17967	522 aa	Known RBP	4.1	□□□□□ -1.75
APL4	YPR029C	DIT1	P21623	536 aa		4.1	□□□□□ -1.75
APL4	YPR029C	KIP2	P28743	706 aa		4.1	□□□□□ -1.75
APL4	YPR029C	CDC27	P38042	758 aa		4.1	□□□□□ -1.75
APL4	YPR029C	PSY4	P38193	441 aa		4.1	□□□□□ -1.75
APL4	YPR029C	AIM9	P40053	627 aa	Known RBP	4.1	□□□□□ -1.75
APL4	YPR029C	YFL034W	P43564	1073 aa		4.1	□□□□□ -1.75
APL4	YPR029C	AGX1	P43567	385 aa		4.1	□□□□□ -1.75
APL4	YPR029C	STR2	P47164	639 aa		4.1	□□□□□ -1.75
APL4	YPR029C	UTP8	P53276	713 aa	Known RBP	4.1	□□□□□ -1.75
APL4	YPR029C	RRN5	Q02983	363 aa		4.1	□□□□□ -1.75
APL4	YPR029C	SNZ1	Q03148	297 aa		4.1	□□□□□ -1.75
APL4	YPR029C	EAR1	Q03212	550 aa		4.1	□□□□□ -1.75
APL4	YPR029C	SHE9	Q04172	456 aa		4.1	□□□□□ -1.75
APL4	YPR029C	CSC1	Q06538	782 aa		4.1	□□□□□ -1.75
APL4	YPR029C	YLR001C	Q07895	862 aa		4.1	□□□□□ -1.75
APL4	YPR029C	BMS1	Q08965	1183 aa	Known RBP	4.1	□□□□□ -1.75
APL4	YPR029C	CMR1	Q12510	522 aa	Known RBP	4.1	□□□□□ -1.75
APL4	YPR029C	PMS1	P14242	873 aa		4.1	□□□□□ -1.75
APL4	YPR029C	PHO84	P25297	587 aa	Known RBP	4.1	□□□□□ -1.75
APL4	YPR029C	RPC53	P25441	422 aa		4.1	□□□□□ -1.75
APL4	YPR029C	RSC6	P25632	483 aa		4.1	□□□□□ -1.75
APL4	YPR029C	SSE1	P32589	693 aa	Known RBP	4.1	□□□□□ -1.75
APL4	YPR029C	SOH1	P38633	127 aa		4.1	□□□□□ -1.75
APL4	YPR029C	IRC6	P43615	237 aa		4.1	□□□□□ -1.75
APL4	YPR029C	NUP84	P52891	726 aa		4.1	□□□□□ -1.75
APL4	YPR029C	PNG1	Q02890	363 aa		4.1	□□□□□ -1.75
APL4	YPR029C	STE20	Q03497	939 aa	Known RBP	4.1	□□□□□ -1.75
APL4	YPR029C	PRP42	Q03776	544 aa	Known RBP	4.1	□□□□□ -1.75
APL4	YPR029C	MTQ2	Q03920	221 aa	Predicted RBP	4.1	□□□□□ -1.75
APL4	YPR029C	FRA1	Q07825	749 aa		4.1	□□□□□ -1.75
APL4	YPR029C	TMA46	Q12000	345 aa	Known RBP	4.1	□□□□□ -1.75
APL4	YPR029C	SFI1	Q12369	946 aa		4.1	□□□□□ -1.75
APL4	YPR029C	RKM4	Q12504	494 aa		4.1	□□□□□ -1.75
APL4	YPR029C	SBP1	P10080	294 aa	Known RBP	4.09	□□□□□ -1.75
APL4	YPR029C	PRP5	P21372	849 aa	Predicted RBP	4.09	□□□□□ -1.75
APL4	YPR029C	GSY1	P23337	708 aa		4.09	□□□□□ -1.75
APL4	YPR029C	AGP1	P25376	633 aa		4.09	□□□□□ -1.75
APL4	YPR029C	MRE11	P32829	692 aa		4.09	□□□□□ -1.75
APL4	YPR029C	DLD1	P32891	587 aa		4.09	□□□□□ -1.75
APL4	YPR029C	SPC29	P33419	253 aa		4.09	□□□□□ -1.75
APL4	YPR029C	YBL028C	P38202	106 aa		4.09	□□□□□ -1.75
APL4	YPR029C	SLI15	P38283	698 aa		4.09	□□□□□ -1.75
APL4	YPR029C	CTM1	P38818	585 aa		4.09	□□□□□ -1.75
APL4	YPR029C	VPS45	P38932	577 aa		4.09	□□□□□ -1.75
APL4	YPR029C	FMP10	P40098	244 aa		4.09	□□□□□ -1.75
APL4	YPR029C	EIS1	Q05050	843 aa	Known RBP	4.09	□□□□□ -1.75
APL4	YPR029C	SMD2	Q06217	110 aa	Known RBP	4.09	□□□□□ -1.75
APL4	YPR029C	TOS4	Q06266	489 aa		4.09	□□□□□ -1.75
APL4	YPR029C	BRE4	Q07660	1125 aa		4.09	□□□□□ -1.75
APL4	YPR029C	HMI1	Q12039	706 aa		4.09	□□□□□ -1.75
APL4	YPR029C	GCD1	P09032	578 aa	Predicted RBP	4.09	□□□□□ -1.76
APL4	YPR029C	RPP1B	P10622	106 aa	Known RBP	4.09	□□□□□ -1.76
APL4	YPR029C	TRM1	P15565	570 aa	Known RBP	4.09	□□□□□ -1.76
APL4	YPR029C	PFK1	P16861	987 aa	Known RBP	4.09	□□□□□ -1.76
APL4	YPR029C	SUV3	P32580	737 aa		4.09	□□□□□ -1.76
APL4	YPR029C	MDL1	P33310	695 aa		4.09	□□□□□ -1.76
APL4	YPR029C	SEG2	P34250	1132 aa		4.09	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 53.2 ms