RNA–Protein interactions for RNA: YJR005C-A

LSO1, Transcript of Putative protein of unknown function, yeast

Gene LSO1, Length 282 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSO1	YJR005C-A	CEX1	Q12453	761 aa		5.01	□□□□□ -1.61
LSO1	YJR005C-A	RPS9B	P05755	195 aa	Known RBP	5	□□□□□ -1.61
LSO1	YJR005C-A	CDC6	P09119	513 aa		5	□□□□□ -1.61
LSO1	YJR005C-A	ACE2	P21192	770 aa		5	□□□□□ -1.61
LSO1	YJR005C-A	SEC20	P28791	383 aa		5	□□□□□ -1.61
LSO1	YJR005C-A	MCM2	P29469	868 aa		5	□□□□□ -1.61
LSO1	YJR005C-A	EBP2	P36049	427 aa	Known RBP	5	□□□□□ -1.61
LSO1	YJR005C-A	CEM1	P39525	442 aa		5	□□□□□ -1.61
LSO1	YJR005C-A	PCI8	P40512	444 aa		5	□□□□□ -1.61
LSO1	YJR005C-A	SNU71	P53207	620 aa	Known RBP	5	□□□□□ -1.61
LSO1	YJR005C-A	RTC4	P53850	401 aa		5	□□□□□ -1.61
LSO1	YJR005C-A	SSL2	Q00578	843 aa		5	□□□□□ -1.61
LSO1	YJR005C-A	VPS30	Q02948	557 aa		5	□□□□□ -1.61
LSO1	YJR005C-A	MYO5	Q04439	1219 aa	Known RBP	5	□□□□□ -1.61
LSO1	YJR005C-A	SMD2	Q06217	110 aa	Known RBP	5	□□□□□ -1.61
LSO1	YJR005C-A	YDL124W	Q07551	312 aa	Known RBP	5	□□□□□ -1.61
LSO1	YJR005C-A	DCS2	Q12123	353 aa		5	□□□□□ -1.61
LSO1	YJR005C-A	HIS4	P00815	799 aa	Known RBP	4.99	□□□□□ -1.61
LSO1	YJR005C-A	AI1	P03875	834 aa		4.99	□□□□□ -1.61
LSO1	YJR005C-A	VPS1	P21576	704 aa	Known RBP	4.99	□□□□□ -1.61
LSO1	YJR005C-A	SRM1	P21827	482 aa		4.99	□□□□□ -1.61
LSO1	YJR005C-A	PRE8	P23639	250 aa		4.99	□□□□□ -1.61
LSO1	YJR005C-A	CDC15	P27636	974 aa		4.99	□□□□□ -1.61
LSO1	YJR005C-A	URA1	P28272	314 aa	Predicted RBP	4.99	□□□□□ -1.61
LSO1	YJR005C-A	DAL1	P32375	460 aa		4.99	□□□□□ -1.61
LSO1	YJR005C-A	MFT1	P33441	392 aa	Known RBP	4.99	□□□□□ -1.61
LSO1	YJR005C-A	CST26	P38226	397 aa		4.99	□□□□□ -1.61
LSO1	YJR005C-A	TOM71	P38825	639 aa	Known RBP	4.99	□□□□□ -1.61
LSO1	YJR005C-A	VPS45	P38932	577 aa		4.99	□□□□□ -1.61
LSO1	YJR005C-A	PES4	P39684	611 aa		4.99	□□□□□ -1.61
LSO1	YJR005C-A	TPM2	P40414	161 aa		4.99	□□□□□ -1.61
LSO1	YJR005C-A	VPS4	P52917	437 aa		4.99	□□□□□ -1.61
LSO1	YJR005C-A	FOL1	P53848	824 aa		4.99	□□□□□ -1.61
LSO1	YJR005C-A	SQS1	P53866	767 aa	Known RBP	4.99	□□□□□ -1.61
LSO1	YJR005C-A	BNI5	P53890	448 aa	Known RBP	4.99	□□□□□ -1.61
LSO1	YJR005C-A	STE20	Q03497	939 aa	Known RBP	4.99	□□□□□ -1.61
LSO1	YJR005C-A	EIS1	Q05050	843 aa	Known RBP	4.99	□□□□□ -1.61
LSO1	YJR005C-A	PSR2	Q07949	397 aa		4.99	□□□□□ -1.61
LSO1	YJR005C-A	THI72	Q08579	599 aa		4.99	□□□□□ -1.61
LSO1	YJR005C-A	YOR296W	Q08748	1289 aa		4.99	□□□□□ -1.61
LSO1	YJR005C-A	PCL8	Q08966	492 aa		4.99	□□□□□ -1.61
LSO1	YJR005C-A	PMA1	P05030	918 aa	Known RBP	4.98	□□□□□ -1.61
LSO1	YJR005C-A	CYC8	P14922	966 aa		4.98	□□□□□ -1.61
LSO1	YJR005C-A	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.98	□□□□□ -1.61	not detected
LSO1	YJR005C-A	THR4	P16120	514 aa	Known RBP	4.98	□□□□□ -1.61
LSO1	YJR005C-A	ADP1	P25371	1049 aa		4.98	□□□□□ -1.61
LSO1	YJR005C-A	GSY2	P27472	705 aa		4.98	□□□□□ -1.61
LSO1	YJR005C-A	CHS3	P29465	1165 aa		4.98	□□□□□ -1.61
LSO1	YJR005C-A	MCM4	P30665	933 aa	Known RBP	4.98	□□□□□ -1.61
LSO1	YJR005C-A	SRP40	P32583	406 aa	Predicted RBP	4.98	□□□□□ -1.61
LSO1	YJR005C-A	STV1	P37296	890 aa		4.98	□□□□□ -1.61
LSO1	YJR005C-A	YBL028C	P38202	106 aa		4.98	□□□□□ -1.61
LSO1	YJR005C-A	FYV10	P40492	516 aa		4.98	□□□□□ -1.61
LSO1	YJR005C-A	DSE4	P53753	1117 aa		4.98	□□□□□ -1.61
LSO1	YJR005C-A	TIM50	Q02776	476 aa		4.98	□□□□□ -1.61
LSO1	YJR005C-A	GFD1	Q04839	188 aa	Known RBP	4.98	□□□□□ -1.61
LSO1	YJR005C-A	HCR1	Q05775	265 aa	Known RBP	4.98	□□□□□ -1.61
LSO1	YJR005C-A	MMR1	Q06324	491 aa		4.98	□□□□□ -1.61
LSO1	YJR005C-A	FRA1	Q07825	749 aa		4.98	□□□□□ -1.61
LSO1	YJR005C-A	FKS1	P38631	1876 aa	Known RBP	4.97	□□□□□ -1.61
LSO1	YJR005C-A	TUF1	P02992	437 aa	Known RBP	4.97	□□□□□ -1.61
LSO1	YJR005C-A	RPL22A	P05749	121 aa	Known RBP	4.97	□□□□□ -1.61
LSO1	YJR005C-A	NUC1	P08466	329 aa		4.97	□□□□□ -1.61
LSO1	YJR005C-A	ALG1	P16661	449 aa		4.97	□□□□□ -1.61
LSO1	YJR005C-A	HPR1	P17629	752 aa	Known RBP	4.97	□□□□□ -1.61
LSO1	YJR005C-A	BMH1	P29311	267 aa	Known RBP	4.97	□□□□□ -1.61
LSO1	YJR005C-A	TFG2	P41896	400 aa	Predicted RBP	4.97	□□□□□ -1.61
LSO1	YJR005C-A	YGL138C	P53122	345 aa		4.97	□□□□□ -1.61
LSO1	YJR005C-A	CUE3	P53137	624 aa	Known RBP	4.97	□□□□□ -1.61
LSO1	YJR005C-A	LSB1	P53281	241 aa		4.97	□□□□□ -1.61
LSO1	YJR005C-A	SDA1	P53313	767 aa	Known RBP	4.97	□□□□□ -1.61
LSO1	YJR005C-A	MDM1	Q01846	1127 aa		4.97	□□□□□ -1.61
LSO1	YJR005C-A	TRS120	Q04183	1289 aa		4.97	□□□□□ -1.61
LSO1	YJR005C-A	CSM3	Q04659	317 aa		4.97	□□□□□ -1.61
LSO1	YJR005C-A	YLH47	Q06493	454 aa		4.97	□□□□□ -1.61
LSO1	YJR005C-A	VIP1	Q06685	1146 aa	Known RBP	4.97	□□□□□ -1.61
LSO1	YJR005C-A	LAP2	Q10740	671 aa		4.97	□□□□□ -1.61
LSO1	YJR005C-A	CBP1	P07252	654 aa		4.96	□□□□□ -1.62
LSO1	YJR005C-A	RPL8A	P17076	256 aa	Known RBP	4.96	□□□□□ -1.62
LSO1	YJR005C-A	SAM2	P19358	384 aa	Known RBP	4.96	□□□□□ -1.62
LSO1	YJR005C-A	SRP54	P20424	541 aa	Known RBP	4.96	□□□□□ -1.62
LSO1	YJR005C-A	GSY1	P23337	708 aa		4.96	□□□□□ -1.62
LSO1	YJR005C-A	PWP2	P25635	923 aa	Known RBP	4.96	□□□□□ -1.62
LSO1	YJR005C-A	FET4	P40988	552 aa		4.96	□□□□□ -1.62
LSO1	YJR005C-A	OSW7	P43611	510 aa		4.96	□□□□□ -1.62
LSO1	YJR005C-A	UBP15	P50101	1230 aa		4.96	□□□□□ -1.62
LSO1	YJR005C-A	CTR9	P89105	1077 aa		4.96	□□□□□ -1.62
LSO1	YJR005C-A	WAR1	Q03631	944 aa		4.96	□□□□□ -1.62
LSO1	YJR005C-A	TLG2	Q08144	397 aa		4.96	□□□□□ -1.62
LSO1	YJR005C-A	DSE3	Q08729	430 aa		4.96	□□□□□ -1.62
LSO1	YJR005C-A	AFT2	Q08957	416 aa		4.96	□□□□□ -1.62
LSO1	YJR005C-A	PTC5	Q12511	572 aa		4.96	□□□□□ -1.62
LSO1	YJR005C-A	CDC37	P06101	506 aa	Known RBP	4.95	□□□□□ -1.62
LSO1	YJR005C-A	MCM3	P24279	971 aa	Known RBP	4.95	□□□□□ -1.62
LSO1	YJR005C-A	MNR2	P35724	969 aa		4.95	□□□□□ -1.62
LSO1	YJR005C-A	MPE1	P35728	441 aa	Known RBP	4.95	□□□□□ -1.62
LSO1	YJR005C-A	ADE17	P38009	592 aa	Known RBP	4.95	□□□□□ -1.62
LSO1	YJR005C-A	SPT8	P38915	602 aa		4.95	□□□□□ -1.62
LSO1	YJR005C-A	STT3	P39007	718 aa	Known RBP	4.95	□□□□□ -1.62
LSO1	YJR005C-A	CCT3	P39077	534 aa	Known RBP	4.95	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 29 ms