RNA–Protein interactions for RNA: YJL140W

RPB4, Transcript of RNA polymerase II subunit B32, yeastyeast

Gene RPB4, Length 666 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB4YJL140W FUN12P39730 1002 aaKnown RBP6.4□□□□□ -1.38
RPB4YJL140W MPP10P47083 593 aaKnown RBP6.4□□□□□ -1.38
RPB4YJL140W YGR130CP53278 816 aa6.4□□□□□ -1.38
RPB4YJL140W TIM50Q02776 476 aa6.4□□□□□ -1.38
RPB4YJL140W MCM5P29496 775 aaKnown RBP6.39□□□□□ -1.39
RPB4YJL140W YKR073CP36153 106 aa6.39□□□□□ -1.39
RPB4YJL140W NOP2P40991 618 aaKnown RBP6.39□□□□□ -1.39
RPB4YJL140W NSE3Q05541 303 aa6.39□□□□□ -1.39
RPB4YJL140W MSC6Q08818 692 aaKnown RBP6.39□□□□□ -1.39
RPB4YJL140W POM152P39685 1337 aa6.39□□□□□ -1.39
RPB4YJL140W CYC7P00045 113 aa6.38□□□□□ -1.39
RPB4YJL140W PUB1P32588 453 aaKnown RBP RIP-Chip data6.38□□□□□ -1.39not detected
RPB4YJL140W FRD1P32614 470 aaKnown RBP6.38□□□□□ -1.39
RPB4YJL140W VPS35P34110 944 aa6.38□□□□□ -1.39
RPB4YJL140W YIL089WP40500 205 aa6.38□□□□□ -1.39
RPB4YJL140W DOT1Q04089 582 aaKnown RBP6.38□□□□□ -1.39
RPB4YJL140W FIG2P25653 1609 aa6.37□□□□□ -1.39
RPB4YJL140W SUI2P20459 304 aaKnown RBP6.37□□□□□ -1.39
RPB4YJL140W SEC20P28791 383 aa6.37□□□□□ -1.39
RPB4YJL140W YKL077WP36081 392 aa6.37□□□□□ -1.39
RPB4YJL140W REI1P38344 393 aaPredicted RBP6.37□□□□□ -1.39
RPB4YJL140W RTR1P40084 226 aaPredicted RBP6.37□□□□□ -1.39
RPB4YJL140W MMM1P41800 426 aa6.37□□□□□ -1.39
RPB4YJL140W UBP16Q02863 499 aa6.37□□□□□ -1.39
RPB4YJL140W SYF1Q04048 859 aaPredicted RBP6.37□□□□□ -1.39
RPB4YJL140W YOR059CQ08448 450 aaKnown RBP6.37□□□□□ -1.39
RPB4YJL140W FAS2P19097 1887 aaKnown RBP6.36□□□□□ -1.39
RPB4YJL140W SSK22P25390 1331 aaPredicted RBP6.36□□□□□ -1.39
RPB4YJL140W RPP0P05317 312 aaKnown RBP6.36□□□□□ -1.39
RPB4YJL140W GPT2P36148 743 aa6.36□□□□□ -1.39
RPB4YJL140W VPS27P40343 622 aaKnown RBP6.36□□□□□ -1.39
RPB4YJL140W MON1P53129 644 aa6.36□□□□□ -1.39
RPB4YJL140W TRM44Q02648 567 aaKnown RBP6.36□□□□□ -1.39
RPB4YJL140W NSI1Q12457 570 aa6.36□□□□□ -1.39
RPB4YJL140W RVB2Q12464 471 aaKnown RBP6.36□□□□□ -1.39
RPB4YJL140W PHO4P07270 312 aaKnown RBP6.35□□□□□ -1.39
RPB4YJL140W LIP5P32875 414 aa6.35□□□□□ -1.39
RPB4YJL140W APL2P36000 726 aaPredicted RBP6.35□□□□□ -1.39
RPB4YJL140W PEA2P40091 420 aa6.35□□□□□ -1.39
RPB4YJL140W CIT3P43635 486 aa6.35□□□□□ -1.39
RPB4YJL140W VPS64Q03944 604 aa6.35□□□□□ -1.39
RPB4YJL140W IOC4Q04213 475 aa6.35□□□□□ -1.39
RPB4YJL140W CDC45Q08032 650 aa6.35□□□□□ -1.39
RPB4YJL140W YNL050CP53952 270 aa6.34□□□□□ -1.39
RPB4YJL140W NOG1Q02892 647 aaKnown RBP6.34□□□□□ -1.39
RPB4YJL140W THI22Q06490 572 aa6.34□□□□□ -1.39
RPB4YJL140W BRE4Q07660 1125 aa6.34□□□□□ -1.39
RPB4YJL140W LYS2P07702 1392 aa6.33□□□□□ -1.4
RPB4YJL140W PRD1P25375 712 aa6.33□□□□□ -1.4
RPB4YJL140W VPS4P52917 437 aa6.33□□□□□ -1.4
RPB4YJL140W PKH1Q03407 766 aa6.33□□□□□ -1.4
RPB4YJL140W MAG2Q06436 670 aaKnown RBP6.33□□□□□ -1.4
RPB4YJL140W OXR1Q08952 273 aa6.33□□□□□ -1.4
RPB4YJL140W SLD2P34252 453 aa6.32□□□□□ -1.4
RPB4YJL140W YGR117CP53270 476 aa6.32□□□□□ -1.4
RPB4YJL140W HEF3P53978 1044 aaKnown RBP6.32□□□□□ -1.4
RPB4YJL140W AVO1Q08236 1176 aa6.32□□□□□ -1.4
RPB4YJL140W RPS4AP0CX35 261 aaKnown RBP6.31□□□□□ -1.4
RPB4YJL140W RPS4BP0CX36 261 aaKnown RBP6.31□□□□□ -1.4
RPB4YJL140W HPR1P17629 752 aaKnown RBP6.31□□□□□ -1.4
RPB4YJL140W MET4P32389 672 aa6.31□□□□□ -1.4
RPB4YJL140W NNK1P36003 928 aa6.31□□□□□ -1.4
RPB4YJL140W EXO5P38289 585 aa6.31□□□□□ -1.4
RPB4YJL140W MSH4P40965 878 aaPredicted RBP6.31□□□□□ -1.4
RPB4YJL140W ZDS1P50111 915 aaKnown RBP6.31□□□□□ -1.4
RPB4YJL140W ZDS2P54786 942 aa6.31□□□□□ -1.4
RPB4YJL140W SEN54Q02825 467 aaPredicted RBP6.31□□□□□ -1.4
RPB4YJL140W CRF1Q04930 467 aa6.31□□□□□ -1.4
RPB4YJL140W RTT109Q07794 436 aa6.31□□□□□ -1.4
RPB4YJL140W HKR1P41809 1802 aa6.3□□□□□ -1.4
RPB4YJL140W TY1A-LR4P0C2I8 440 aaKnown RBP6.3□□□□□ -1.4
RPB4YJL140W TY1A-DR6P0CX70 440 aa6.3□□□□□ -1.4
RPB4YJL140W TY1A-ER1P0CX71 440 aa6.3□□□□□ -1.4
RPB4YJL140W TY1A-LR2P0CX72 440 aa6.3□□□□□ -1.4
RPB4YJL140W TY1A-PLP0CX73 440 aa6.3□□□□□ -1.4
RPB4YJL140W TY1A-JR1P0CX74 440 aa6.3□□□□□ -1.4
RPB4YJL140W TY1A-LR3P0CX75 440 aa6.3□□□□□ -1.4
RPB4YJL140W TY1A-ML2P0CX76 440 aa6.3□□□□□ -1.4
RPB4YJL140W AFG2P32794 780 aa6.3□□□□□ -1.4
RPB4YJL140W ALT1P52893 592 aa6.3□□□□□ -1.4
RPB4YJL140W UBX2Q04228 584 aa6.3□□□□□ -1.4
RPB4YJL140W ALG6Q12001 544 aaKnown RBP6.3□□□□□ -1.4
RPB4YJL140W TY1A-GR1Q12085 440 aa6.3□□□□□ -1.4
RPB4YJL140W RRG1Q12167 365 aaPredicted RBP6.3□□□□□ -1.4
RPB4YJL140W TY1A-PR3Q6Q5H1 440 aaKnown RBP6.3□□□□□ -1.4
RPB4YJL140W TY1A-OLQ92392 440 aaKnown RBP6.3□□□□□ -1.4
RPB4YJL140W SMY2P32909 740 aaKnown RBP6.29□□□□□ -1.4
RPB4YJL140W WHI3P34761 661 aaKnown RBP6.29□□□□□ -1.4
RPB4YJL140W STV1P37296 890 aa6.29□□□□□ -1.4
RPB4YJL140W DAK2P43550 591 aa6.29□□□□□ -1.4
RPB4YJL140W YGR045CP53229 120 aa6.29□□□□□ -1.4
RPB4YJL140W COQ4O13525 335 aa6.28□□□□□ -1.4
RPB4YJL140W VMA4P22203 233 aaKnown RBP6.28□□□□□ -1.4
RPB4YJL140W MAM1P40065 302 aa6.28□□□□□ -1.4
RPB4YJL140W IRC24P40580 263 aa6.28□□□□□ -1.4
RPB4YJL140W AVT1P47082 602 aa6.28□□□□□ -1.4
RPB4YJL140W DAL4Q04895 635 aa6.28□□□□□ -1.4
RPB4YJL140W BMS1Q08965 1183 aaKnown RBP6.28□□□□□ -1.4
RPB4YJL140W CSR2Q12734 1121 aa6.28□□□□□ -1.4
RPB4YJL140W MSH3P25336 1018 aa6.27□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 8.6 ms