RNA–Protein interactions for RNA: YJL054W

TIM54, Transcript of Component of the mitochondrial TIM22 complex, yeastyeast

Gene TIM54, Length 1,437 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TIM54YJL054W YNL165WP53891 406 aa6.32□□□□□ -1.4
TIM54YJL054W ALD6P54115 500 aaKnown RBP6.32□□□□□ -1.4
TIM54YJL054W RPS15Q01855 142 aaKnown RBP6.32□□□□□ -1.4
TIM54YJL054W TY1A-BLQ12266 440 aa6.32□□□□□ -1.4
TIM54YJL054W SUT2Q12286 268 aa6.32□□□□□ -1.4
TIM54YJL054W YOR131CQ12486 218 aa6.32□□□□□ -1.4
TIM54YJL054W VPS13Q07878 3144 aa6.31□□□□□ -1.4
TIM54YJL054W SAM2P19358 384 aaKnown RBP6.31□□□□□ -1.4
TIM54YJL054W RRN6P32786 894 aa6.31□□□□□ -1.4
TIM54YJL054W RGT1P32862 1170 aa6.31□□□□□ -1.4
TIM54YJL054W SHM1P37292 490 aaPredicted RBP6.31□□□□□ -1.4
TIM54YJL054W TOM71P38825 639 aaKnown RBP6.31□□□□□ -1.4
TIM54YJL054W YTA6P40328 754 aa6.31□□□□□ -1.4
TIM54YJL054W ECM30Q06673 1274 aa6.31□□□□□ -1.4
TIM54YJL054W TY1A-DR3Q12441 440 aa6.31□□□□□ -1.4
TIM54YJL054W TAO3P40468 2376 aa6.31□□□□□ -1.4
TIM54YJL054W MLF3P32047 452 aa6.3□□□□□ -1.4
TIM54YJL054W YBR197CP38306 217 aa6.3□□□□□ -1.4
TIM54YJL054W YFL040WP43562 540 aa6.3□□□□□ -1.4
TIM54YJL054W YJR107WP47145 328 aa6.3□□□□□ -1.4
TIM54YJL054W YGR125WP53273 1036 aa6.3□□□□□ -1.4
TIM54YJL054W YPL034WQ03083 165 aa6.3□□□□□ -1.4
TIM54YJL054W ECM16Q04217 1267 aaKnown RBP6.3□□□□□ -1.4
TIM54YJL054W DUS4Q06063 367 aa6.3□□□□□ -1.4
TIM54YJL054W NKP2Q06162 153 aa6.3□□□□□ -1.4
TIM54YJL054W MDM20Q12387 796 aaKnown RBP6.3□□□□□ -1.4
TIM54YJL054W ACE2P21192 770 aa6.29□□□□□ -1.4
TIM54YJL054W SRP40P32583 406 aaPredicted RBP6.29□□□□□ -1.4
TIM54YJL054W UTR4P32626 227 aa6.29□□□□□ -1.4
TIM54YJL054W ISC10P32645 267 aa6.29□□□□□ -1.4
TIM54YJL054W SCD5P34758 872 aa6.29□□□□□ -1.4
TIM54YJL054W WHI3P34761 661 aaKnown RBP6.29□□□□□ -1.4
TIM54YJL054W MYO3P36006 1272 aa6.29□□□□□ -1.4
TIM54YJL054W UIP5P36137 443 aa6.29□□□□□ -1.4
TIM54YJL054W HXT5P38695 592 aa6.29□□□□□ -1.4
TIM54YJL054W AFG3P39925 761 aa6.29□□□□□ -1.4
TIM54YJL054W FIR1P40020 876 aa6.29□□□□□ -1.4
TIM54YJL054W BRE5P53741 515 aaKnown RBP6.29□□□□□ -1.4
TIM54YJL054W CAF120P53836 1060 aa6.29□□□□□ -1.4
TIM54YJL054W FOL1P53848 824 aa6.29□□□□□ -1.4
TIM54YJL054W UFD2P54860 961 aa6.29□□□□□ -1.4
TIM54YJL054W FMP30Q02883 468 aa6.29□□□□□ -1.4
TIM54YJL054W BUL2Q03758 920 aaKnown RBP6.29□□□□□ -1.4
TIM54YJL054W SSF2Q12153 453 aaPredicted RBP6.29□□□□□ -1.4
TIM54YJL054W RPS31P05759 152 aaKnown RBP6.28□□□□□ -1.4
TIM54YJL054W PRO3P32263 286 aaKnown RBP6.28□□□□□ -1.4
TIM54YJL054W EAR1Q03212 550 aa6.28□□□□□ -1.4
TIM54YJL054W RIM20Q12033 661 aa6.28□□□□□ -1.4
TIM54YJL054W NUC1P08466 329 aa6.27□□□□□ -1.41
TIM54YJL054W RIT1P23796 513 aa6.27□□□□□ -1.41
TIM54YJL054W ANP1P32629 500 aa6.27□□□□□ -1.41
TIM54YJL054W SKI2P35207 1287 aaKnown RBP RIP-Chip data6.27□□□□□ -1.41not detected
TIM54YJL054W PHO88P38264 188 aaPredicted RBP6.27□□□□□ -1.41
TIM54YJL054W KSP1P38691 1029 aaKnown RBP6.27□□□□□ -1.41
TIM54YJL054W UBP15P50101 1230 aa6.27□□□□□ -1.41
TIM54YJL054W VPS30Q02948 557 aa6.27□□□□□ -1.41
TIM54YJL054W SAM1P10659 382 aaKnown RBP6.26□□□□□ -1.41
TIM54YJL054W PDC6P26263 563 aaKnown RBP6.26□□□□□ -1.41
TIM54YJL054W RPL8BP29453 256 aaKnown RBP6.26□□□□□ -1.41
TIM54YJL054W BCS1P32839 456 aa6.26□□□□□ -1.41
TIM54YJL054W TGL1P34163 548 aa6.26□□□□□ -1.41
TIM54YJL054W CRG1P38892 291 aaRIP-Chip data6.26□□□□□ -1.41not detected
TIM54YJL054W VPS45P38932 577 aa6.26□□□□□ -1.41
TIM54YJL054W BOL3P39724 118 aa6.26□□□□□ -1.41
TIM54YJL054W MTO1P53070 669 aa6.26□□□□□ -1.41
TIM54YJL054W RPT6Q01939 405 aaKnown RBP6.26□□□□□ -1.41
TIM54YJL054W TMA64Q04600 565 aaKnown RBP6.26□□□□□ -1.41
TIM54YJL054W SPH1Q06160 661 aa6.26□□□□□ -1.41
TIM54YJL054W SPN1Q06505 410 aaPredicted RBP6.26□□□□□ -1.41
TIM54YJL054W MSC6Q08818 692 aaKnown RBP6.26□□□□□ -1.41
TIM54YJL054W CLF1Q12309 687 aaPredicted RBP6.26□□□□□ -1.41
TIM54YJL054W VAS1P07806 1104 aaKnown RBP6.25□□□□□ -1.41
TIM54YJL054W NAM8Q00539 523 aaKnown RBP6.25□□□□□ -1.41
TIM54YJL054W YVH1Q02256 364 aaKnown RBP6.25□□□□□ -1.41
TIM54YJL054W UTP4Q06679 776 aaKnown RBP6.25□□□□□ -1.41
TIM54YJL054W RAD50P12753 1312 aa6.25□□□□□ -1.41
TIM54YJL054W MCM4P30665 933 aaKnown RBP6.25□□□□□ -1.41
TIM54YJL054W RER2P35196 286 aa6.25□□□□□ -1.41
TIM54YJL054W MCR1P36060 302 aaKnown RBP6.25□□□□□ -1.41
TIM54YJL054W AAP1P37898 856 aaKnown RBP6.25□□□□□ -1.41
TIM54YJL054W NOC2P39744 710 aaKnown RBP6.25□□□□□ -1.41
TIM54YJL054W ROG3P43602 733 aa6.25□□□□□ -1.41
TIM54YJL054W VPS53P47061 822 aa6.25□□□□□ -1.41
TIM54YJL054W SLD5Q03406 294 aa6.25□□□□□ -1.41
TIM54YJL054W MYO5Q04439 1219 aaKnown RBP6.25□□□□□ -1.41
TIM54YJL054W FPR4Q06205 392 aaPredicted RBP6.25□□□□□ -1.41
TIM54YJL054W GUD1Q07729 489 aa6.25□□□□□ -1.41
TIM54YJL054W MRPL33P20084 86 aa6.24□□□□□ -1.41
TIM54YJL054W MAK31P23059 88 aa6.24□□□□□ -1.41
TIM54YJL054W YUR1P26725 428 aa6.24□□□□□ -1.41
TIM54YJL054W SEC8P32855 1065 aa6.24□□□□□ -1.41
TIM54YJL054W TIM23P32897 222 aa6.24□□□□□ -1.41
TIM54YJL054W SHP1P34223 423 aa6.24□□□□□ -1.41
TIM54YJL054W YIR007WP40566 764 aa6.24□□□□□ -1.41
TIM54YJL054W SKP2P42843 763 aa6.24□□□□□ -1.41
TIM54YJL054W LSB1P53281 241 aa6.24□□□□□ -1.41
TIM54YJL054W HDA1P53973 706 aa6.24□□□□□ -1.41
TIM54YJL054W DUS3Q06053 668 aaKnown RBP6.24□□□□□ -1.41
TIM54YJL054W ERP3Q12403 225 aa6.24□□□□□ -1.41
TIM54YJL054W YBL113CQ7M4S9 792 aa6.24□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 31.5 ms