RNA–Protein interactions for RNA: YDR136C

VPS61, Transcript of Dubious open reading frame, yeastyeast

Gene VPS61, Length 573 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS61YDR136C BDF2Q07442 638 aa6.86□□□□□ -1.31
VPS61YDR136C BUD20Q08004 166 aaPredicted RBP6.86□□□□□ -1.31
VPS61YDR136C PSF3Q12146 194 aa6.86□□□□□ -1.31
VPS61YDR136C PRT1P06103 763 aaKnown RBP6.85□□□□□ -1.31
VPS61YDR136C PPR1P07272 904 aaPredicted RBP6.85□□□□□ -1.31
VPS61YDR136C SNF3P10870 884 aa6.85□□□□□ -1.31
VPS61YDR136C SLY41P22215 453 aa6.85□□□□□ -1.31
VPS61YDR136C LCB1P25045 558 aaKnown RBP6.85□□□□□ -1.31
VPS61YDR136C HXT1P32465 570 aa6.85□□□□□ -1.31
VPS61YDR136C ECM32P32644 1121 aaKnown RBP6.85□□□□□ -1.31
VPS61YDR136C MDL2P33311 773 aa6.85□□□□□ -1.31
VPS61YDR136C RPC25P35718 212 aa6.85□□□□□ -1.31
VPS61YDR136C GDT1P38301 280 aaPredicted RBP6.85□□□□□ -1.31
VPS61YDR136C TOM71P38825 639 aaKnown RBP6.85□□□□□ -1.31
VPS61YDR136C IES1P43579 692 aa6.85□□□□□ -1.31
VPS61YDR136C VTC2P43585 828 aa6.85□□□□□ -1.31
VPS61YDR136C RPN11P43588 306 aaKnown RBP6.85□□□□□ -1.31
VPS61YDR136C PIP2P52960 996 aa6.85□□□□□ -1.31
VPS61YDR136C UTP22P53254 1237 aaPredicted RBP6.85□□□□□ -1.31
VPS61YDR136C RET3P53600 189 aa6.85□□□□□ -1.31
VPS61YDR136C RPT6Q01939 405 aaKnown RBP6.85□□□□□ -1.31
VPS61YDR136C GIS4Q04233 774 aa6.85□□□□□ -1.31
VPS61YDR136C YPL260WQ08977 551 aa6.85□□□□□ -1.31
VPS61YDR136C FKS1P38631 1876 aaKnown RBP6.84□□□□□ -1.31
VPS61YDR136C FOB1O13329 566 aa6.84□□□□□ -1.31
VPS61YDR136C TOP1P04786 769 aa6.84□□□□□ -1.31
VPS61YDR136C TOM70P07213 617 aaKnown RBP6.84□□□□□ -1.31
VPS61YDR136C STI1P15705 589 aaKnown RBP RIP-Chip data6.84□□□□□ -1.31not detected
VPS61YDR136C RAD53P22216 821 aa6.84□□□□□ -1.31
VPS61YDR136C PAP1P29468 568 aaKnown RBP6.84□□□□□ -1.31
VPS61YDR136C VRP1P37370 817 aa6.84□□□□□ -1.31
VPS61YDR136C TDA3P38758 523 aa6.84□□□□□ -1.31
VPS61YDR136C BRL1P38770 471 aa6.84□□□□□ -1.31
VPS61YDR136C NPR2P39923 615 aa6.84□□□□□ -1.31
VPS61YDR136C VID27P40157 782 aa6.84□□□□□ -1.31
VPS61YDR136C YJL181WP46987 611 aa6.84□□□□□ -1.31
VPS61YDR136C PRP42Q03776 544 aaKnown RBP6.84□□□□□ -1.31
VPS61YDR136C SAS4Q04003 481 aa6.84□□□□□ -1.31
VPS61YDR136C UBX2Q04228 584 aa6.84□□□□□ -1.31
VPS61YDR136C SFH1Q06168 426 aa6.84□□□□□ -1.31
VPS61YDR136C TYW1Q08960 810 aaKnown RBP6.84□□□□□ -1.31
VPS61YDR136C CWC2Q12046 339 aaPredicted RBP6.84□□□□□ -1.31
VPS61YDR136C RUD3Q12234 484 aaKnown RBP6.84□□□□□ -1.31
VPS61YDR136C TUS1Q06412 1307 aa6.83□□□□□ -1.32
VPS61YDR136C RAD1P06777 1100 aa6.83□□□□□ -1.32
VPS61YDR136C OM45P16547 393 aa6.83□□□□□ -1.32
VPS61YDR136C KRE2P27809 442 aa6.83□□□□□ -1.32
VPS61YDR136C SAS3P34218 831 aa6.83□□□□□ -1.32
VPS61YDR136C UGA2P38067 497 aa6.83□□□□□ -1.32
VPS61YDR136C SAP1P39955 897 aaKnown RBP6.83□□□□□ -1.32
VPS61YDR136C MAD1P40957 749 aa6.83□□□□□ -1.32
VPS61YDR136C YJR079WP47126 109 aa6.83□□□□□ -1.32
VPS61YDR136C TRS120Q04183 1289 aa6.83□□□□□ -1.32
VPS61YDR136C SOV1Q04748 898 aa6.83□□□□□ -1.32
VPS61YDR136C YOL075CQ08234 1294 aa6.83□□□□□ -1.32
VPS61YDR136C GYP1Q08484 637 aa6.83□□□□□ -1.32
VPS61YDR136C YOR223WQ12015 292 aa6.83□□□□□ -1.32
VPS61YDR136C PLP2Q12017 286 aa6.83□□□□□ -1.32
VPS61YDR136C CLF1Q12309 687 aaPredicted RBP6.83□□□□□ -1.32
VPS61YDR136C GSC2P40989 1895 aa6.82□□□□□ -1.32
VPS61YDR136C TY1A-DR4O74302 440 aa6.82□□□□□ -1.32
VPS61YDR136C CDC8P00572 216 aa6.82□□□□□ -1.32
VPS61YDR136C TUF1P02992 437 aaKnown RBP6.82□□□□□ -1.32
VPS61YDR136C TY1A-HP0C2I4 478 aaKnown RBP6.82□□□□□ -1.32
VPS61YDR136C TY1A-AP0CX57 440 aa6.82□□□□□ -1.32
VPS61YDR136C TY1A-PR1P0CX58 440 aa6.82□□□□□ -1.32
VPS61YDR136C TY1A-ORP0CX59 440 aa6.82□□□□□ -1.32
VPS61YDR136C TY1A-PR2P0CX60 440 aa6.82□□□□□ -1.32
VPS61YDR136C TY1A-DR5P0CX65 440 aa6.82□□□□□ -1.32
VPS61YDR136C TY1A-ER2P0CX66 440 aa6.82□□□□□ -1.32
VPS61YDR136C TY1A-GR3P0CX67 440 aa6.82□□□□□ -1.32
VPS61YDR136C TY1A-LR1P0CX68 440 aa6.82□□□□□ -1.32
VPS61YDR136C TY1A-MR2P0CX69 440 aa6.82□□□□□ -1.32
VPS61YDR136C MIP1P15801 1254 aa6.82□□□□□ -1.32
VPS61YDR136C SRP54P20424 541 aaKnown RBP6.82□□□□□ -1.32
VPS61YDR136C ESS1P22696 170 aa6.82□□□□□ -1.32
VPS61YDR136C PAT1P25644 796 aaKnown RBP6.82□□□□□ -1.32
VPS61YDR136C SLD2P34252 453 aa6.82□□□□□ -1.32
VPS61YDR136C RIX1P38883 763 aaPredicted RBP6.82□□□□□ -1.32
VPS61YDR136C CCT3P39077 534 aaKnown RBP6.82□□□□□ -1.32
VPS61YDR136C DSN1P40568 576 aa6.82□□□□□ -1.32
VPS61YDR136C TY1A-JR2P47099 440 aa6.82□□□□□ -1.32
VPS61YDR136C SDA1P53313 767 aaKnown RBP6.82□□□□□ -1.32
VPS61YDR136C DMA2P53924 522 aa6.82□□□□□ -1.32
VPS61YDR136C TY1A-DR1Q03856 440 aa6.82□□□□□ -1.32
VPS61YDR136C TY1A-ML1Q04706 440 aaKnown RBP6.82□□□□□ -1.32
VPS61YDR136C OPY2Q06810 360 aa6.82□□□□□ -1.32
VPS61YDR136C SLK19Q08581 821 aaKnown RBP6.82□□□□□ -1.32
VPS61YDR136C DSE3Q08729 430 aa6.82□□□□□ -1.32
VPS61YDR136C DAS2Q12084 232 aa6.82□□□□□ -1.32
VPS61YDR136C TY1A-BRQ12217 440 aa6.82□□□□□ -1.32
VPS61YDR136C TY1A-NL2Q12470 440 aa6.82□□□□□ -1.32
VPS61YDR136C TY1A-GR2Q12485 440 aa6.82□□□□□ -1.32
VPS61YDR136C CKA2P19454 339 aa6.81□□□□□ -1.32
VPS61YDR136C SCJ1P25303 377 aa6.81□□□□□ -1.32
VPS61YDR136C PDC6P26263 563 aaKnown RBP6.81□□□□□ -1.32
VPS61YDR136C FRD1P32614 470 aaKnown RBP6.81□□□□□ -1.32
VPS61YDR136C YKL091CP33324 310 aaKnown RBP6.81□□□□□ -1.32
VPS61YDR136C SMC2P38989 1170 aaKnown RBP6.81□□□□□ -1.32
VPS61YDR136C PXA1P41909 870 aa6.81□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms