RNA–Protein interactions for RNA: YPL047W

SGF11, Transcript of Integral subunit of SAGA histone acetyltransferase complex, yeastyeast

Gene SGF11, Length 300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGF11YPL047W AFG2P32794 780 aa2.73□□□□□ -1.97
SGF11YPL047W RPN3P40016 523 aaKnown RBP2.73□□□□□ -1.97
SGF11YPL047W PBP1P53297 722 aaKnown RBP2.73□□□□□ -1.97
SGF11YPL047W YPL109CQ02981 657 aa2.73□□□□□ -1.97
SGF11YPL047W PLB2Q03674 706 aa2.73□□□□□ -1.97
SGF11YPL047W DUS4Q06063 367 aa2.73□□□□□ -1.97
SGF11YPL047W YPL260WQ08977 551 aa2.73□□□□□ -1.97
SGF11YPL047W SPO21Q12411 609 aa2.73□□□□□ -1.97
SGF11YPL047W GAL10P04397 699 aa2.72□□□□□ -1.97
SGF11YPL047W KIN2P13186 1147 aaKnown RBP2.72□□□□□ -1.97
SGF11YPL047W SEC23P15303 768 aaKnown RBP2.72□□□□□ -1.97
SGF11YPL047W SNF5P18480 905 aa2.72□□□□□ -1.97
SGF11YPL047W HCM1P25364 564 aa2.72□□□□□ -1.97
SGF11YPL047W MNN10P50108 393 aaKnown RBP2.72□□□□□ -1.97
SGF11YPL047W MCM6P53091 1017 aaKnown RBP2.72□□□□□ -1.97
SGF11YPL047W SUN4P53616 420 aa2.72□□□□□ -1.97
SGF11YPL047W ACK1Q07622 623 aaPredicted RBP2.72□□□□□ -1.97
SGF11YPL047W GPB1Q08886 897 aa2.72□□□□□ -1.97
SGF11YPL047W TAF13P11747 167 aa2.71□□□□□ -1.98
SGF11YPL047W STE11P23561 717 aa2.71□□□□□ -1.98
SGF11YPL047W CDC20P26309 610 aa2.71□□□□□ -1.98
SGF11YPL047W MET4P32389 672 aa2.71□□□□□ -1.98
SGF11YPL047W THI12P42883 340 aa2.71□□□□□ -1.98
SGF11YPL047W THI5P43534 340 aa2.71□□□□□ -1.98
SGF11YPL047W THI11P47183 340 aa2.71□□□□□ -1.98
SGF11YPL047W TMA10Q06177 86 aa2.71□□□□□ -1.98
SGF11YPL047W TOS4Q06266 489 aa2.71□□□□□ -1.98
SGF11YPL047W THI13Q07748 340 aa2.71□□□□□ -1.98
SGF11YPL047W VTS1Q08831 523 aaKnown RBP RIP-Chip data2.71□□□□□ -1.98not detected
SGF11YPL047W APL1P27351 700 aa2.7□□□□□ -1.98
SGF11YPL047W LST4P34239 828 aa2.7□□□□□ -1.98
SGF11YPL047W PPX1P38698 397 aa2.7□□□□□ -1.98
SGF11YPL047W FAA3P39002 694 aa2.7□□□□□ -1.98
SGF11YPL047W YML122CQ03207 126 aa2.7□□□□□ -1.98
SGF11YPL047W SVS1Q12254 260 aa2.7□□□□□ -1.98
SGF11YPL047W SRM1P21827 482 aa2.69□□□□□ -1.98
SGF11YPL047W PRE9P23638 258 aaKnown RBP2.69□□□□□ -1.98
SGF11YPL047W PMI40P29952 429 aaKnown RBP2.69□□□□□ -1.98
SGF11YPL047W RPT1P33299 467 aaKnown RBP2.69□□□□□ -1.98
SGF11YPL047W STM1P39015 273 aaKnown RBP2.69□□□□□ -1.98
SGF11YPL047W PIC2P40035 300 aa2.69□□□□□ -1.98
SGF11YPL047W AIM21P40563 679 aa2.69□□□□□ -1.98
SGF11YPL047W GTF1P53260 183 aaPredicted RBP2.69□□□□□ -1.98
SGF11YPL047W MAP1Q01662 387 aaKnown RBP RIP-Chip data2.69□□□□□ -1.98not detected
SGF11YPL047W RAT1Q02792 1006 aaKnown RBP2.69□□□□□ -1.98
SGF11YPL047W NTO1Q12311 748 aa2.69□□□□□ -1.98
SGF11YPL047W HXK1P04806 485 aaKnown RBP2.68□□□□□ -1.98
SGF11YPL047W RGD1P38339 666 aa2.68□□□□□ -1.98
SGF11YPL047W MRPS18P42847 217 aa2.68□□□□□ -1.98
SGF11YPL047W PHO23P50947 330 aa2.68□□□□□ -1.98
SGF11YPL047W CTF4Q01454 927 aa2.68□□□□□ -1.98
SGF11YPL047W ROD1Q02805 837 aa2.68□□□□□ -1.98
SGF11YPL047W YLR224WQ05947 369 aa2.68□□□□□ -1.98
SGF11YPL047W MSC6Q08818 692 aaKnown RBP2.68□□□□□ -1.98
SGF11YPL047W MCD1Q12158 566 aa2.68□□□□□ -1.98
SGF11YPL047W CDC6P09119 513 aa2.67□□□□□ -1.98
SGF11YPL047W MKK2P32491 506 aa2.67□□□□□ -1.98
SGF11YPL047W YFL054CP43549 646 aa2.67□□□□□ -1.98
SGF11YPL047W VPS62P53285 467 aa2.67□□□□□ -1.98
SGF11YPL047W SIW14P53965 281 aa2.67□□□□□ -1.98
SGF11YPL047W YAP6Q03935 383 aa2.67□□□□□ -1.98
SGF11YPL047W YER152CP10356 443 aa2.66□□□□□ -1.98
SGF11YPL047W RAD53P22216 821 aa2.66□□□□□ -1.98
SGF11YPL047W EMC1P25574 760 aa2.66□□□□□ -1.98
SGF11YPL047W SYP1P25623 870 aaKnown RBP2.66□□□□□ -1.98
SGF11YPL047W MLS1P30952 554 aa2.66□□□□□ -1.98
SGF11YPL047W SSF1P38789 453 aaPredicted RBP2.66□□□□□ -1.98
SGF11YPL047W CHS7P38843 316 aa2.66□□□□□ -1.98
SGF11YPL047W ENT3P47160 408 aa2.66□□□□□ -1.98
SGF11YPL047W GCV2P49095 1034 aa2.66□□□□□ -1.98
SGF11YPL047W SIZ1Q04195 904 aa2.66□□□□□ -1.98
SGF11YPL047W NOP12Q08208 459 aaKnown RBP2.66□□□□□ -1.98
SGF11YPL047W RIB2Q12362 591 aaKnown RBP2.66□□□□□ -1.98
SGF11YPL047W WHI5Q12416 295 aa2.66□□□□□ -1.98
SGF11YPL047W PMA1P05030 918 aaKnown RBP2.65□□□□□ -1.99
SGF11YPL047W BAS1P22035 811 aa2.65□□□□□ -1.99
SGF11YPL047W DCG1P32460 244 aa2.65□□□□□ -1.99
SGF11YPL047W SEC8P32855 1065 aa2.65□□□□□ -1.99
SGF11YPL047W CNN1P43618 361 aa2.65□□□□□ -1.99
SGF11YPL047W YGR122WP53272 402 aa2.65□□□□□ -1.99
SGF11YPL047W MSC2Q03455 724 aa2.65□□□□□ -1.99
SGF11YPL047W ATG13Q06628 738 aa2.65□□□□□ -1.99
SGF11YPL047W MRL1Q06815 381 aa2.65□□□□□ -1.99
SGF11YPL047W HMI1Q12039 706 aa2.65□□□□□ -1.99
SGF11YPL047W SEC20P28791 383 aa2.64□□□□□ -1.99
SGF11YPL047W PEP7P32609 515 aa2.64□□□□□ -1.99
SGF11YPL047W IOC3P43596 787 aa2.64□□□□□ -1.99
SGF11YPL047W KIN4Q01919 800 aa2.64□□□□□ -1.99
SGF11YPL047W RAD2P07276 1031 aa2.63□□□□□ -1.99
SGF11YPL047W DBP5P20449 482 aaKnown RBP2.63□□□□□ -1.99
SGF11YPL047W ACE2P21192 770 aa2.63□□□□□ -1.99
SGF11YPL047W DEF1P35732 738 aaKnown RBP2.63□□□□□ -1.99
SGF11YPL047W UGA2P38067 497 aa2.63□□□□□ -1.99
SGF11YPL047W POA1P38218 177 aa2.63□□□□□ -1.99
SGF11YPL047W MSS4P38994 779 aa2.63□□□□□ -1.99
SGF11YPL047W PLB1P39105 664 aa2.63□□□□□ -1.99
SGF11YPL047W THS1P04801 734 aaKnown RBP2.62□□□□□ -1.99
SGF11YPL047W RPP2AP05319 106 aaKnown RBP2.62□□□□□ -1.99
SGF11YPL047W MCM7P38132 845 aa2.62□□□□□ -1.99
SGF11YPL047W HXT13P39924 564 aa2.62□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 26.7 ms