RNA–Protein interactions for RNA: YMR264W

CUE1, Transcript of Ubiquitin-binding protein, yeast

Gene CUE1, Length 612 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CUE1	YMR264W	CBK1	P53894	756 aa		13.17	□□□□□ -0.3
CUE1	YMR264W	SPT21	P35209	758 aa		13.16	□□□□□ -0.3
CUE1	YMR264W	PXL1	P36166	706 aa		13.16	□□□□□ -0.3
CUE1	YMR264W	SLI15	P38283	698 aa		13.16	□□□□□ -0.3
CUE1	YMR264W	RTT107	P38850	1070 aa		13.16	□□□□□ -0.3
CUE1	YMR264W	GAA1	P39012	614 aa		13.16	□□□□□ -0.3
CUE1	YMR264W	NIT1	P40447	199 aa		13.16	□□□□□ -0.3
CUE1	YMR264W	TCB2	P48231	1178 aa		13.16	□□□□□ -0.3
CUE1	YMR264W	YLH47	Q06493	454 aa		13.16	□□□□□ -0.3
CUE1	YMR264W	SMC6	Q12749	1114 aa		13.16	□□□□□ -0.3
CUE1	YMR264W	MIP1	P15801	1254 aa		13.15	□□□□□ -0.3
CUE1	YMR264W	SHM1	P37292	490 aa	Predicted RBP	13.15	□□□□□ -0.3
CUE1	YMR264W	PAN5	P38787	379 aa		13.15	□□□□□ -0.3
CUE1	YMR264W	BUL2	Q03758	920 aa	Known RBP	13.15	□□□□□ -0.3
CUE1	YMR264W	OXR1	Q08952	273 aa		13.15	□□□□□ -0.3
CUE1	YMR264W	AIM7	Q12156	149 aa		13.15	□□□□□ -0.3
CUE1	YMR264W	RPS6A	P0CX37	236 aa	Known RBP	13.14	□□□□□ -0.31
CUE1	YMR264W	RPS6B	P0CX38	236 aa	Predicted RBP	13.14	□□□□□ -0.31
CUE1	YMR264W	PCH2	P38126	564 aa		13.14	□□□□□ -0.31
CUE1	YMR264W	SUL1	P38359	859 aa		13.14	□□□□□ -0.31
CUE1	YMR264W	MIP6	P38760	659 aa	Known RBP	13.14	□□□□□ -0.31
CUE1	YMR264W	SOL4	P53315	255 aa		13.14	□□□□□ -0.31
CUE1	YMR264W	MFM1	Q02783	413 aa		13.14	□□□□□ -0.31
CUE1	YMR264W	YAP7	Q08182	245 aa		13.14	□□□□□ -0.31
CUE1	YMR264W	ERG12	P07277	443 aa		13.13	□□□□□ -0.31
CUE1	YMR264W	KRS1	P15180	591 aa	Known RBP	13.13	□□□□□ -0.31
CUE1	YMR264W	OM45	P16547	393 aa		13.13	□□□□□ -0.31
CUE1	YMR264W	SPO11	P23179	398 aa		13.13	□□□□□ -0.31
CUE1	YMR264W	TPS3	P38426	1054 aa	Known RBP	13.13	□□□□□ -0.31
CUE1	YMR264W	LEO1	P38439	464 aa		13.13	□□□□□ -0.31
CUE1	YMR264W	NDT80	P38830	627 aa		13.13	□□□□□ -0.31
CUE1	YMR264W	YOL075C	Q08234	1294 aa		13.13	□□□□□ -0.31
CUE1	YMR264W	ATG9	Q12142	997 aa		13.13	□□□□□ -0.31
CUE1	YMR264W	ILV1	P00927	576 aa	Known RBP	13.12	□□□□□ -0.31
CUE1	YMR264W	YEL076C-A	P0CX16	216 aa		13.12	□□□□□ -0.31
CUE1	YMR264W	YLR464W	P0CX17	216 aa		13.12	□□□□□ -0.31
CUE1	YMR264W	ISY1	P21374	235 aa	Predicted RBP	13.12	□□□□□ -0.31
CUE1	YMR264W	RRP43	P25359	394 aa	Predicted RBP	13.12	□□□□□ -0.31
CUE1	YMR264W	YKL091C	P33324	310 aa	Known RBP	13.12	□□□□□ -0.31
CUE1	YMR264W	CAB3	P36076	571 aa		13.12	□□□□□ -0.31
CUE1	YMR264W	YEL076C	P39971	216 aa		13.12	□□□□□ -0.31
CUE1	YMR264W	ROG3	P43602	733 aa		13.12	□□□□□ -0.31
CUE1	YMR264W	FMS1	P50264	508 aa		13.12	□□□□□ -0.31
CUE1	YMR264W	YPL216W	Q08964	1102 aa		13.12	□□□□□ -0.31
CUE1	YMR264W	PET123	P17558	318 aa		13.11	□□□□□ -0.31
CUE1	YMR264W	ACA1	P39970	489 aa		13.11	□□□□□ -0.31
CUE1	YMR264W	CEP3	P40969	608 aa		13.11	□□□□□ -0.31
CUE1	YMR264W	OYE2	Q03558	400 aa	Known RBP	13.11	□□□□□ -0.31
CUE1	YMR264W	VPS38	Q05919	439 aa		13.11	□□□□□ -0.31
CUE1	YMR264W	COG4	Q06096	861 aa		13.11	□□□□□ -0.31
CUE1	YMR264W	RPC25	P35718	212 aa		13.1	□□□□□ -0.31
CUE1	YMR264W	ISW1	P38144	1129 aa		13.1	□□□□□ -0.31
CUE1	YMR264W	EMP47	P43555	445 aa		13.1	□□□□□ -0.31
CUE1	YMR264W	HMI1	Q12039	706 aa		13.1	□□□□□ -0.31
CUE1	YMR264W	SFI1	Q12369	946 aa		13.1	□□□□□ -0.31
CUE1	YMR264W	GAL2	P13181	574 aa		13.09	□□□□□ -0.31
CUE1	YMR264W	PPS1	P38148	807 aa		13.09	□□□□□ -0.31
CUE1	YMR264W	EFM2	P38347	419 aa		13.09	□□□□□ -0.31
CUE1	YMR264W	ALF1	P53904	254 aa		13.09	□□□□□ -0.31
CUE1	YMR264W	VPS60	Q03390	229 aa		13.09	□□□□□ -0.31
CUE1	YMR264W	YLR287C	Q05881	355 aa		13.09	□□□□□ -0.31
CUE1	YMR264W	RRP6	Q12149	733 aa	Known RBP	13.09	□□□□□ -0.31
CUE1	YMR264W	RAM2	P29703	316 aa		13.08	□□□□□ -0.32
CUE1	YMR264W	CAJ1	P39101	391 aa		13.08	□□□□□ -0.32
CUE1	YMR264W	APT1	P49435	187 aa	Known RBP	13.08	□□□□□ -0.32
CUE1	YMR264W	GUP1	P53154	560 aa		13.08	□□□□□ -0.32
CUE1	YMR264W	PGA2	P53903	129 aa		13.08	□□□□□ -0.32
CUE1	YMR264W	YOL098C	Q12496	1037 aa		13.08	□□□□□ -0.32
CUE1	YMR264W	PHO88	P38264	188 aa	Predicted RBP	13.07	□□□□□ -0.32
CUE1	YMR264W	SIP3	P38717	1229 aa		13.07	□□□□□ -0.32
CUE1	YMR264W	PIH1	P38768	344 aa		13.07	□□□□□ -0.32
CUE1	YMR264W	TOS3	P43637	560 aa		13.07	□□□□□ -0.32
CUE1	YMR264W	HFM1	P51979	1187 aa		13.07	□□□□□ -0.32
CUE1	YMR264W	ORC4	P54791	529 aa		13.07	□□□□□ -0.32
CUE1	YMR264W	CSR2	Q12734	1121 aa		13.07	□□□□□ -0.32
CUE1	YMR264W	YLR278C	Q05854	1341 aa		13.07	□□□□□ -0.32
CUE1	YMR264W	THS1	P04801	734 aa	Known RBP	13.06	□□□□□ -0.32
CUE1	YMR264W	RTG2	P32608	588 aa	Known RBP	13.06	□□□□□ -0.32
CUE1	YMR264W	UGA4	P32837	571 aa		13.06	□□□□□ -0.32
CUE1	YMR264W	VFA1	P40080	203 aa		13.06	□□□□□ -0.32
CUE1	YMR264W	ATG3	P40344	310 aa		13.06	□□□□□ -0.32
CUE1	YMR264W	NUP82	P40368	713 aa		13.06	□□□□□ -0.32
CUE1	YMR264W	CAF130	P53280	1122 aa	Predicted RBP	13.06	□□□□□ -0.32
CUE1	YMR264W	YML037C	Q03703	340 aa		13.06	□□□□□ -0.32
CUE1	YMR264W	FUS2	Q05670	677 aa		13.06	□□□□□ -0.32
CUE1	YMR264W	SPO75	Q07798	868 aa		13.06	□□□□□ -0.32
CUE1	YMR264W	ARP6	Q12509	438 aa		13.06	□□□□□ -0.32
CUE1	YMR264W	PET111	P08468	800 aa		13.05	□□□□□ -0.32
CUE1	YMR264W	PFK1	P16861	987 aa	Known RBP	13.05	□□□□□ -0.32
CUE1	YMR264W	ERG5	P54781	538 aa		13.05	□□□□□ -0.32
CUE1	YMR264W	UME1	Q03010	460 aa		13.05	□□□□□ -0.32
CUE1	YMR264W	SUB2	Q07478	446 aa	Known RBP	13.05	□□□□□ -0.32
CUE1	YMR264W	CWC2	Q12046	339 aa	Predicted RBP	13.05	□□□□□ -0.32
CUE1	YMR264W	MTF2	P10849	440 aa		13.04	□□□□□ -0.32
CUE1	YMR264W	RAD18	P10862	487 aa		13.04	□□□□□ -0.32
CUE1	YMR264W	MAK16	P10962	306 aa	Predicted RBP	13.04	□□□□□ -0.32
CUE1	YMR264W	SEC23	P15303	768 aa	Known RBP	13.04	□□□□□ -0.32
CUE1	YMR264W	UBC1	P21734	215 aa	Known RBP	13.04	□□□□□ -0.32
CUE1	YMR264W	RPC53	P25441	422 aa		13.04	□□□□□ -0.32
CUE1	YMR264W	STO1	P34160	861 aa	Known RBP	13.04	□□□□□ -0.32

Retrieved 100 of 5,963 RNA–protein pairs in 16.7 ms