RNA–Protein interactions for RNA: YLR438C-A

LSM3, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM3, Length 270 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM3YLR438C-A SLD5Q03406 294 aa14.26□□□□□ -0.13
LSM3YLR438C-A BUL2Q03758 920 aaKnown RBP14.26□□□□□ -0.13
LSM3YLR438C-A ISA1Q07821 250 aaPredicted RBP14.26□□□□□ -0.13
LSM3YLR438C-A ILV1P00927 576 aaKnown RBP14.25□□□□□ -0.13
LSM3YLR438C-A MCM3P24279 971 aaKnown RBP14.25□□□□□ -0.13
LSM3YLR438C-A DID4P36108 232 aa14.25□□□□□ -0.13
LSM3YLR438C-A ISW1P38144 1129 aa14.25□□□□□ -0.13
LSM3YLR438C-A SNF7P39929 240 aaKnown RBP14.25□□□□□ -0.13
LSM3YLR438C-A ATG32P40458 529 aa14.25□□□□□ -0.13
LSM3YLR438C-A ORC4P54791 529 aa14.25□□□□□ -0.13
LSM3YLR438C-A DUS4Q06063 367 aa14.25□□□□□ -0.13
LSM3YLR438C-A SMC6Q12749 1114 aa14.25□□□□□ -0.13
LSM3YLR438C-A MYO1P08964 1928 aa14.25□□□□□ -0.13
LSM3YLR438C-A SEC8P32855 1065 aa14.24□□□□□ -0.13
LSM3YLR438C-A GAA1P39012 614 aa14.24□□□□□ -0.13
LSM3YLR438C-A RVS167P39743 482 aaKnown RBP14.24□□□□□ -0.13
LSM3YLR438C-A CUE3P53137 624 aaKnown RBP14.24□□□□□ -0.13
LSM3YLR438C-A CNM67P53865 581 aaKnown RBP14.24□□□□□ -0.13
LSM3YLR438C-A SVF1Q05515 481 aa14.24□□□□□ -0.13
LSM3YLR438C-A ERP3Q12403 225 aa14.24□□□□□ -0.13
LSM3YLR438C-A YKT6P36015 200 aaKnown RBP14.23□□□□□ -0.13
LSM3YLR438C-A REG2P38232 338 aa14.23□□□□□ -0.13
LSM3YLR438C-A VPS29P38759 282 aa14.23□□□□□ -0.13
LSM3YLR438C-A PTA1Q01329 785 aaPredicted RBP14.23□□□□□ -0.13
LSM3YLR438C-A YLR326WQ06170 240 aaKnown RBP14.23□□□□□ -0.13
LSM3YLR438C-A HIS4P00815 799 aaKnown RBP14.22□□□□□ -0.13
LSM3YLR438C-A TKL1P23254 680 aaKnown RBP14.22□□□□□ -0.13
LSM3YLR438C-A BMH1P29311 267 aaKnown RBP14.22□□□□□ -0.13
LSM3YLR438C-A MCM4P30665 933 aaKnown RBP14.22□□□□□ -0.13
LSM3YLR438C-A PGM1P33401 570 aaKnown RBP14.22□□□□□ -0.13
LSM3YLR438C-A NCS6P53088 359 aa14.22□□□□□ -0.13
LSM3YLR438C-A MSC6Q08818 692 aaKnown RBP14.22□□□□□ -0.13
LSM3YLR438C-A CLB5P30283 435 aa14.21□□□□□ -0.13
LSM3YLR438C-A RPN12P32496 274 aa14.21□□□□□ -0.13
LSM3YLR438C-A MXR1P40029 184 aa14.21□□□□□ -0.13
LSM3YLR438C-A DAK2P43550 591 aa14.21□□□□□ -0.13
LSM3YLR438C-A YPT11P48559 417 aa14.21□□□□□ -0.13
LSM3YLR438C-A UBA2P52488 636 aa14.21□□□□□ -0.13
LSM3YLR438C-A VMS1Q04311 632 aaKnown RBP14.21□□□□□ -0.13
LSM3YLR438C-A MET7Q08645 548 aa14.21□□□□□ -0.13
LSM3YLR438C-A RGT1P32862 1170 aa14.2□□□□□ -0.14
LSM3YLR438C-A TFC4P33339 1025 aa14.2□□□□□ -0.14
LSM3YLR438C-A YER130CP39959 443 aa14.2□□□□□ -0.14
LSM3YLR438C-A VPS53P47061 822 aa14.2□□□□□ -0.14
LSM3YLR438C-A YGR153WP48238 217 aa14.2□□□□□ -0.14
LSM3YLR438C-A UBP15P50101 1230 aa14.2□□□□□ -0.14
LSM3YLR438C-A CBK1P53894 756 aa14.2□□□□□ -0.14
LSM3YLR438C-A TOM1Q03280 3268 aa14.19□□□□□ -0.14
LSM3YLR438C-A GPA1P08539 472 aa14.19□□□□□ -0.14
LSM3YLR438C-A CDC15P27636 974 aa14.19□□□□□ -0.14
LSM3YLR438C-A SAC6P32599 642 aaKnown RBP14.19□□□□□ -0.14
LSM3YLR438C-A PHM6Q05637 104 aa14.19□□□□□ -0.14
LSM3YLR438C-A PSR2Q07949 397 aa14.19□□□□□ -0.14
LSM3YLR438C-A RPL22AP05749 121 aaKnown RBP14.18□□□□□ -0.14
LSM3YLR438C-A PRE10P21242 288 aaKnown RBP RIP-Chip data14.18□□□□□ -0.14not detected
LSM3YLR438C-A ADY4Q05955 493 aa14.18□□□□□ -0.14
LSM3YLR438C-A WHI4Q07655 649 aaKnown RBP14.18□□□□□ -0.14
LSM3YLR438C-A TRS33Q99394 268 aa14.18□□□□□ -0.14
LSM3YLR438C-A FOB1O13329 566 aa14.17□□□□□ -0.14
LSM3YLR438C-A PGK1P00560 416 aaKnown RBP14.17□□□□□ -0.14
LSM3YLR438C-A CKA2P19454 339 aa14.17□□□□□ -0.14
LSM3YLR438C-A PET10P36139 283 aa14.17□□□□□ -0.14
LSM3YLR438C-A HMF1P40037 129 aaKnown RBP14.17□□□□□ -0.14
LSM3YLR438C-A ROG3P43602 733 aa14.17□□□□□ -0.14
LSM3YLR438C-A ZPR1P53303 486 aaKnown RBP14.17□□□□□ -0.14
LSM3YLR438C-A CRD1Q07560 283 aa14.17□□□□□ -0.14
LSM3YLR438C-A CLN3P13365 580 aa14.16□□□□□ -0.14
LSM3YLR438C-A ESS1P22696 170 aa14.16□□□□□ -0.14
LSM3YLR438C-A PSF2P40359 213 aa14.16□□□□□ -0.14
LSM3YLR438C-A THI6P41835 540 aa14.16□□□□□ -0.14
LSM3YLR438C-A VTC2P43585 828 aa14.16□□□□□ -0.14
LSM3YLR438C-A PGA2P53903 129 aa14.16□□□□□ -0.14
LSM3YLR438C-A UBP11P36026 717 aa14.15□□□□□ -0.14
LSM3YLR438C-A GPD2P41911 440 aaKnown RBP14.15□□□□□ -0.14
LSM3YLR438C-A DIP5P53388 608 aa14.15□□□□□ -0.14
LSM3YLR438C-A TRM11Q12463 433 aa14.15□□□□□ -0.14
LSM3YLR438C-A RRM3P38766 723 aa14.14□□□□□ -0.15
LSM3YLR438C-A CTR1P49573 406 aa14.14□□□□□ -0.15
LSM3YLR438C-A SUP45P12385 437 aaKnown RBP14.13□□□□□ -0.15
LSM3YLR438C-A CDC48P25694 835 aaKnown RBP14.13□□□□□ -0.15
LSM3YLR438C-A RAM2P29703 316 aa14.13□□□□□ -0.15
LSM3YLR438C-A HIR1P32479 840 aa14.13□□□□□ -0.15
LSM3YLR438C-A SUV3P32580 737 aa14.13□□□□□ -0.15
LSM3YLR438C-A DBP7P36120 742 aaKnown RBP14.13□□□□□ -0.15
LSM3YLR438C-A TVP38P36164 337 aa14.13□□□□□ -0.15
LSM3YLR438C-A NPR3P38742 1146 aa14.13□□□□□ -0.15
LSM3YLR438C-A FYV10P40492 516 aa14.13□□□□□ -0.15
LSM3YLR438C-A YGL039WP53183 348 aaKnown RBP14.13□□□□□ -0.15
LSM3YLR438C-A KRE33P53914 1056 aaKnown RBP14.13□□□□□ -0.15
LSM3YLR438C-A YDR461C-AQ2V2P7 80 aa14.13□□□□□ -0.15
LSM3YLR438C-A SRD1P09007 221 aa14.12□□□□□ -0.15
LSM3YLR438C-A SIP3P38717 1229 aa14.12□□□□□ -0.15
LSM3YLR438C-A RPN3P40016 523 aaKnown RBP14.12□□□□□ -0.15
LSM3YLR438C-A FUS2Q05670 677 aa14.12□□□□□ -0.15
LSM3YLR438C-A TLG2Q08144 397 aa14.12□□□□□ -0.15
LSM3YLR438C-A ICL2Q12031 575 aa14.12□□□□□ -0.15
LSM3YLR438C-A YLL058WQ12198 575 aa14.12□□□□□ -0.15
LSM3YLR438C-A YUR1P26725 428 aa14.11□□□□□ -0.15
LSM3YLR438C-A PIH1P38768 344 aa14.11□□□□□ -0.15
LSM3YLR438C-A NUP82P40368 713 aa14.11□□□□□ -0.15
Retrieved 100 of 5,963 RNA–protein pairs in 97.1 ms