RNA–Protein interactions for RNA: YLR221C

RSA3, Transcript of Protein with a likely role in ribosomal maturation, yeast

Gene RSA3, Length 663 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RSA3	YLR221C	IRR1	P40541	1150 aa		7.57	□□□□□ -1.2
RSA3	YLR221C	CNN1	P43618	361 aa		7.57	□□□□□ -1.2
RSA3	YLR221C	YMR074C	Q04773	145 aa		7.57	□□□□□ -1.2
RSA3	YLR221C	INO1	P11986	533 aa		7.56	□□□□□ -1.2
RSA3	YLR221C	DBP5	P20449	482 aa	Known RBP	7.56	□□□□□ -1.2
RSA3	YLR221C	SEA4	P38164	1038 aa		7.56	□□□□□ -1.2
RSA3	YLR221C	YBR184W	P38299	523 aa		7.56	□□□□□ -1.2
RSA3	YLR221C	TIF35	Q04067	274 aa	Known RBP	7.56	□□□□□ -1.2
RSA3	YLR221C	YLR225C	Q05948	407 aa	Known RBP	7.56	□□□□□ -1.2
RSA3	YLR221C	LAP2	Q10740	671 aa		7.56	□□□□□ -1.2
RSA3	YLR221C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	7.55	□□□□□ -1.2	not detected
RSA3	YLR221C	VBA5	P36172	582 aa		7.55	□□□□□ -1.2
RSA3	YLR221C	CHZ1	P40019	153 aa	Predicted RBP	7.55	□□□□□ -1.2
RSA3	YLR221C	ALG12	P53730	551 aa		7.55	□□□□□ -1.2
RSA3	YLR221C	RAT1	Q02792	1006 aa	Known RBP	7.55	□□□□□ -1.2
RSA3	YLR221C	YKL107W	P34251	309 aa		7.54	□□□□□ -1.2
RSA3	YLR221C	PBY1	P38254	753 aa		7.54	□□□□□ -1.2
RSA3	YLR221C	HSE1	P38753	452 aa		7.54	□□□□□ -1.2
RSA3	YLR221C	FPR3	P38911	411 aa	Known RBP	7.54	□□□□□ -1.2
RSA3	YLR221C	YAR028W	P39548	234 aa		7.54	□□□□□ -1.2
RSA3	YLR221C	HNT2	P49775	206 aa		7.54	□□□□□ -1.2
RSA3	YLR221C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	7.54	□□□□□ -1.2	not detected
RSA3	YLR221C	AVO1	Q08236	1176 aa		7.54	□□□□□ -1.2
RSA3	YLR221C	FLC1	Q08967	793 aa		7.54	□□□□□ -1.2
RSA3	YLR221C	YOR223W	Q12015	292 aa		7.54	□□□□□ -1.2
RSA3	YLR221C	HSP60	P19882	572 aa	Known RBP	7.53	□□□□□ -1.2
RSA3	YLR221C	MOT2	P34909	587 aa	Known RBP	7.53	□□□□□ -1.2
RSA3	YLR221C	YHR020W	P38708	688 aa	Known RBP	7.53	□□□□□ -1.2
RSA3	YLR221C	VPS53	P47061	822 aa		7.53	□□□□□ -1.2
RSA3	YLR221C	ERP6	P53198	216 aa		7.53	□□□□□ -1.2
RSA3	YLR221C	YGR125W	P53273	1036 aa		7.53	□□□□□ -1.2
RSA3	YLR221C	YNR063W	P53749	607 aa		7.53	□□□□□ -1.2
RSA3	YLR221C	SDH1	Q00711	640 aa		7.53	□□□□□ -1.2
RSA3	YLR221C	ESC2	Q06340	456 aa		7.53	□□□□□ -1.2
RSA3	YLR221C	GAL11	P19659	1081 aa		7.52	□□□□□ -1.21
RSA3	YLR221C	STE5	P32917	917 aa		7.52	□□□□□ -1.21
RSA3	YLR221C	MCM7	P38132	845 aa		7.52	□□□□□ -1.21
RSA3	YLR221C	RGD1	P38339	666 aa		7.52	□□□□□ -1.21
RSA3	YLR221C	GGA2	P38817	585 aa	Known RBP	7.52	□□□□□ -1.21
RSA3	YLR221C	AOS1	Q06624	347 aa		7.52	□□□□□ -1.21
RSA3	YLR221C	FMP25	Q08023	583 aa		7.52	□□□□□ -1.21
RSA3	YLR221C	PPM2	Q08282	695 aa		7.52	□□□□□ -1.21
RSA3	YLR221C	PRP9	P19736	530 aa	Known RBP	7.51	□□□□□ -1.21
RSA3	YLR221C	RPL8B	P29453	256 aa	Known RBP	7.51	□□□□□ -1.21
RSA3	YLR221C	SCT1	P32784	759 aa		7.51	□□□□□ -1.21
RSA3	YLR221C	AFG2	P32794	780 aa		7.51	□□□□□ -1.21
RSA3	YLR221C	ALG3	P38179	458 aa		7.51	□□□□□ -1.21
RSA3	YLR221C	NUP82	P40368	713 aa		7.51	□□□□□ -1.21
RSA3	YLR221C	PTC5	Q12511	572 aa		7.51	□□□□□ -1.21
RSA3	YLR221C	GPT2	P36148	743 aa		7.5	□□□□□ -1.21
RSA3	YLR221C	RSP5	P39940	809 aa	Known RBP	7.5	□□□□□ -1.21
RSA3	YLR221C	MPH1	P40562	993 aa		7.5	□□□□□ -1.21
RSA3	YLR221C	YGL176C	P46945	554 aa		7.5	□□□□□ -1.21
RSA3	YLR221C	EAF1	Q06337	982 aa		7.5	□□□□□ -1.21
RSA3	YLR221C	ALG6	Q12001	544 aa	Known RBP	7.5	□□□□□ -1.21
RSA3	YLR221C	YLR125W	Q12138	136 aa		7.5	□□□□□ -1.21
RSA3	YLR221C	CIT1	P00890	479 aa		7.49	□□□□□ -1.21
RSA3	YLR221C	GCD1	P09032	578 aa	Predicted RBP	7.49	□□□□□ -1.21
RSA3	YLR221C	PUF4	P25339	888 aa	Known RBP RIP-Chip data	7.49	□□□□□ -1.21	RIP-Chip
RSA3	YLR221C	YGR045C	P53229	120 aa		7.49	□□□□□ -1.21
RSA3	YLR221C	MET6	P05694	767 aa	Known RBP	7.48	□□□□□ -1.21
RSA3	YLR221C	WHI3	P34761	661 aa	Known RBP	7.48	□□□□□ -1.21
RSA3	YLR221C	MMM1	P41800	426 aa		7.48	□□□□□ -1.21
RSA3	YLR221C	PFD1	P46988	109 aa		7.48	□□□□□ -1.21
RSA3	YLR221C	DOT1	Q04089	582 aa	Known RBP	7.48	□□□□□ -1.21
RSA3	YLR221C	GNT1	Q12096	491 aa		7.48	□□□□□ -1.21
RSA3	YLR221C	PHO8	P11491	566 aa		7.47	□□□□□ -1.21
RSA3	YLR221C	ARE1	P25628	610 aa		7.47	□□□□□ -1.21
RSA3	YLR221C	MLS1	P30952	554 aa		7.47	□□□□□ -1.21
RSA3	YLR221C	TIM23	P32897	222 aa		7.47	□□□□□ -1.21
RSA3	YLR221C	HUL4	P40985	892 aa		7.47	□□□□□ -1.21
RSA3	YLR221C	UTP8	P53276	713 aa	Known RBP	7.47	□□□□□ -1.21
RSA3	YLR221C	YPL260W	Q08977	551 aa		7.47	□□□□□ -1.21
RSA3	YLR221C	YPL066W	Q12194	479 aa		7.47	□□□□□ -1.21
RSA3	YLR221C	ELM1	P32801	640 aa		7.46	□□□□□ -1.22
RSA3	YLR221C	ELA1	P53861	379 aa	Predicted RBP	7.46	□□□□□ -1.22
RSA3	YLR221C	NFS1	P25374	497 aa		7.45	□□□□□ -1.22
RSA3	YLR221C	NNK1	P36003	928 aa		7.45	□□□□□ -1.22
RSA3	YLR221C	QNS1	P38795	714 aa	Known RBP	7.45	□□□□□ -1.22
RSA3	YLR221C	CIT3	P43635	486 aa		7.45	□□□□□ -1.22
RSA3	YLR221C	TPO2	P53283	614 aa		7.45	□□□□□ -1.22
RSA3	YLR221C	POB3	Q04636	552 aa	Known RBP	7.45	□□□□□ -1.22
RSA3	YLR221C	RSA3	Q05942	220 aa	Known RBP	7.45	□□□□□ -1.22
RSA3	YLR221C	CAN1	P04817	590 aa		7.44	□□□□□ -1.22
RSA3	YLR221C	MBP1	P39678	833 aa		7.44	□□□□□ -1.22
RSA3	YLR221C	ALR2	P43553	858 aa		7.44	□□□□□ -1.22
RSA3	YLR221C	UTP14	Q04500	899 aa	Known RBP	7.44	□□□□□ -1.22
RSA3	YLR221C	RET1	P22276	1149 aa	Known RBP	7.43	□□□□□ -1.22
RSA3	YLR221C	SPP382	Q06411	708 aa	Predicted RBP	7.43	□□□□□ -1.22
RSA3	YLR221C	HRK1	Q08732	759 aa	Known RBP	7.43	□□□□□ -1.22
RSA3	YLR221C	NSI1	Q12457	570 aa		7.43	□□□□□ -1.22
RSA3	YLR221C	THI4	P32318	326 aa		7.42	□□□□□ -1.22
RSA3	YLR221C	SMY2	P32909	740 aa	Known RBP	7.42	□□□□□ -1.22
RSA3	YLR221C	TAF8	Q03750	510 aa		7.42	□□□□□ -1.22
RSA3	YLR221C	YDL124W	Q07551	312 aa	Known RBP	7.42	□□□□□ -1.22
RSA3	YLR221C	CDC11	P32458	415 aa		7.41	□□□□□ -1.22
RSA3	YLR221C	LRG1	P35688	1017 aa		7.41	□□□□□ -1.22
RSA3	YLR221C	RCM1	P53972	490 aa		7.41	□□□□□ -1.22
RSA3	YLR221C	YLR257W	Q06146	321 aa	Known RBP	7.41	□□□□□ -1.22
RSA3	YLR221C	UBX5	Q06682	500 aa		7.41	□□□□□ -1.22

Retrieved 100 of 5,963 RNA–protein pairs in 90.3 ms