RNA–Protein interactions for RNA: YKL085W

MDH1, Transcript of Mitochondrial malate dehydrogenase, yeastyeast

Gene MDH1, Length 1,005 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDH1YKL085W MAK11P20484 414 aaKnown RBP7.62□□□□□ -1.19
MDH1YKL085W MAK31P23059 88 aa7.62□□□□□ -1.19
MDH1YKL085W SKI2P35207 1287 aaKnown RBP RIP-Chip data7.62□□□□□ -1.19not detected
MDH1YKL085W YGR035CP53222 116 aa7.62□□□□□ -1.19
MDH1YKL085W LSB1P53281 241 aa7.62□□□□□ -1.19
MDH1YKL085W SSF2Q12153 453 aaPredicted RBP7.62□□□□□ -1.19
MDH1YKL085W RFC1P38630 861 aaKnown RBP7.61□□□□□ -1.19
MDH1YKL085W FMP10P40098 244 aa7.61□□□□□ -1.19
MDH1YKL085W INP52P50942 1183 aa7.61□□□□□ -1.19
MDH1YKL085W MDM1Q01846 1127 aa7.61□□□□□ -1.19
MDH1YKL085W YML020WQ03722 664 aa7.61□□□□□ -1.19
MDH1YKL085W SPN1Q06505 410 aaPredicted RBP7.61□□□□□ -1.19
MDH1YKL085W NCR1Q12200 1170 aa7.61□□□□□ -1.19
MDH1YKL085W URK1P27515 501 aa7.6□□□□□ -1.19
MDH1YKL085W RTG1P32607 177 aa7.6□□□□□ -1.19
MDH1YKL085W PRS1P32895 427 aaKnown RBP7.6□□□□□ -1.19
MDH1YKL085W RER2P35196 286 aa7.6□□□□□ -1.19
MDH1YKL085W CRG1P38892 291 aaRIP-Chip data7.6□□□□□ -1.19not detected
MDH1YKL085W SPO74P45819 413 aa7.6□□□□□ -1.19
MDH1YKL085W YNL034WP53963 612 aa7.6□□□□□ -1.19
MDH1YKL085W YNL018CP53976 612 aa7.6□□□□□ -1.19
MDH1YKL085W RIM20Q12033 661 aa7.6□□□□□ -1.19
MDH1YKL085W IDI1P15496 288 aa7.59□□□□□ -1.19
MDH1YKL085W AFT1P22149 690 aa7.59□□□□□ -1.19
MDH1YKL085W RDH54P38086 958 aa7.59□□□□□ -1.19
MDH1YKL085W UBP15P50101 1230 aa7.59□□□□□ -1.19
MDH1YKL085W MAP1Q01662 387 aaKnown RBP RIP-Chip data7.59□□□□□ -1.19not detected
MDH1YKL085W TFC6Q06339 672 aa7.59□□□□□ -1.19
MDH1YKL085W DSE3Q08729 430 aa7.59□□□□□ -1.19
MDH1YKL085W YLL058WQ12198 575 aa7.59□□□□□ -1.19
MDH1YKL085W FUB1P25659 250 aa7.58□□□□□ -1.2
MDH1YKL085W STB5P38699 743 aa7.58□□□□□ -1.2
MDH1YKL085W PAN5P38787 379 aa7.58□□□□□ -1.2
MDH1YKL085W VID30P53076 958 aa7.58□□□□□ -1.2
MDH1YKL085W MET13P53128 600 aa7.58□□□□□ -1.2
MDH1YKL085W NKP2Q06162 153 aa7.58□□□□□ -1.2
MDH1YKL085W VIP1Q06685 1146 aaKnown RBP7.58□□□□□ -1.2
MDH1YKL085W WHI4Q07655 649 aaKnown RBP7.58□□□□□ -1.2
MDH1YKL085W YLR422WQ06409 1932 aa7.58□□□□□ -1.2
MDH1YKL085W IRA2P19158 3079 aa7.57□□□□□ -1.2
MDH1YKL085W SPT2P06843 333 aaPredicted RBP7.57□□□□□ -1.2
MDH1YKL085W POL3P15436 1097 aa7.57□□□□□ -1.2
MDH1YKL085W AAP1P37898 856 aaKnown RBP7.57□□□□□ -1.2
MDH1YKL085W OYE3P41816 400 aaPredicted RBP7.57□□□□□ -1.2
MDH1YKL085W SAD1P43589 448 aa7.57□□□□□ -1.2
MDH1YKL085W CUS1Q02554 436 aaPredicted RBP7.57□□□□□ -1.2
MDH1YKL085W RPL8AP17076 256 aaKnown RBP7.56□□□□□ -1.2
MDH1YKL085W SEC20P28791 383 aa7.56□□□□□ -1.2
MDH1YKL085W OPT1P40897 799 aa7.56□□□□□ -1.2
MDH1YKL085W ASE1P50275 885 aa7.56□□□□□ -1.2
MDH1YKL085W SKY1Q03656 742 aa7.56□□□□□ -1.2
MDH1YKL085W ECM16Q04217 1267 aaKnown RBP7.56□□□□□ -1.2
MDH1YKL085W BCK2P33306 851 aa7.55□□□□□ -1.2
MDH1YKL085W TVP38P36164 337 aa7.55□□□□□ -1.2
MDH1YKL085W HMF1P40037 129 aaKnown RBP7.55□□□□□ -1.2
MDH1YKL085W PNG1Q02890 363 aa7.55□□□□□ -1.2
MDH1YKL085W HEH2Q03281 663 aa7.55□□□□□ -1.2
MDH1YKL085W ARP6Q12509 438 aa7.55□□□□□ -1.2
MDH1YKL085W YOR111WQ99210 232 aa7.55□□□□□ -1.2
MDH1YKL085W FMP27Q06179 2628 aa7.54□□□□□ -1.2
MDH1YKL085W MSS51P32335 436 aa7.54□□□□□ -1.2
MDH1YKL085W RME1P32338 300 aaKnown RBP7.54□□□□□ -1.2
MDH1YKL085W UBP11P36026 717 aa7.54□□□□□ -1.2
MDH1YKL085W SLX1P38324 304 aa7.54□□□□□ -1.2
MDH1YKL085W MSD1P15179 658 aaKnown RBP7.53□□□□□ -1.2
MDH1YKL085W RNR3P21672 869 aaKnown RBP7.53□□□□□ -1.2
MDH1YKL085W COQ8P27697 501 aa7.53□□□□□ -1.2
MDH1YKL085W CLB5P30283 435 aa7.53□□□□□ -1.2
MDH1YKL085W SYN8P31377 255 aa7.53□□□□□ -1.2
MDH1YKL085W IMP2'P32351 346 aa7.53□□□□□ -1.2
MDH1YKL085W SMY2P32909 740 aaKnown RBP7.53□□□□□ -1.2
MDH1YKL085W EAP1P36041 632 aaKnown RBP7.53□□□□□ -1.2
MDH1YKL085W TPM2P40414 161 aa7.53□□□□□ -1.2
MDH1YKL085W ALG2P43636 503 aa7.53□□□□□ -1.2
MDH1YKL085W MAG2Q06436 670 aaKnown RBP7.53□□□□□ -1.2
MDH1YKL085W GPI13Q07830 1017 aa7.53□□□□□ -1.2
MDH1YKL085W OXR1Q08952 273 aa7.53□□□□□ -1.2
MDH1YKL085W PWP2P25635 923 aaKnown RBP7.52□□□□□ -1.21
MDH1YKL085W SUL1P38359 859 aa7.52□□□□□ -1.21
MDH1YKL085W YEL025CP39991 1188 aa7.52□□□□□ -1.21
MDH1YKL085W PSP2P50109 593 aaKnown RBP7.52□□□□□ -1.21
MDH1YKL085W ORC4P54791 529 aa7.52□□□□□ -1.21
MDH1YKL085W MUK1Q02866 612 aa7.52□□□□□ -1.21
MDH1YKL085W GDE1Q02979 1223 aa7.52□□□□□ -1.21
MDH1YKL085W EST2Q06163 884 aa7.52□□□□□ -1.21
MDH1YKL085W RAD59Q12223 238 aa7.52□□□□□ -1.21
MDH1YKL085W PGA3Q12746 312 aaKnown RBP7.52□□□□□ -1.21
MDH1YKL085W PRC1P00729 532 aa7.51□□□□□ -1.21
MDH1YKL085W UBC1P21734 215 aaKnown RBP7.51□□□□□ -1.21
MDH1YKL085W SUV3P32580 737 aa7.51□□□□□ -1.21
MDH1YKL085W DRE2P36152 348 aa7.51□□□□□ -1.21
MDH1YKL085W CIC1P38779 376 aaKnown RBP7.51□□□□□ -1.21
MDH1YKL085W FAF1P40546 346 aaPredicted RBP7.51□□□□□ -1.21
MDH1YKL085W NUP42P49686 430 aaKnown RBP7.51□□□□□ -1.21
MDH1YKL085W CCH1P50077 2039 aa7.51□□□□□ -1.21
MDH1YKL085W PEP3P27801 918 aa7.5□□□□□ -1.21
MDH1YKL085W REF2P42073 533 aaPredicted RBP7.5□□□□□ -1.21
MDH1YKL085W YLR455WQ06188 304 aa7.5□□□□□ -1.21
MDH1YKL085W MMR1Q06324 491 aa7.5□□□□□ -1.21
MDH1YKL085W RAD50P12753 1312 aa7.5□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 55.8 ms