RNA–Protein interactions for RNA: YKL085W

MDH1, Transcript of Mitochondrial malate dehydrogenase, yeastyeast

Gene MDH1, Length 1,005 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDH1YKL085W MON2P48563 1636 aaPredicted RBP14.59□□□□□ -0.07
MDH1YKL085W INO80P53115 1489 aa14.46□□□□□ -0.09
MDH1YKL085W DNA2P38859 1522 aa13.85□□□□□ -0.19
MDH1YKL085W SWR1Q05471 1514 aa13.81□□□□□ -0.2
MDH1YKL085W TY1B-DR4Q07793 1604 aa13.68□□□□□ -0.22
MDH1YKL085W TCB3Q03640 1545 aaKnown RBP13.62□□□□□ -0.23
MDH1YKL085W KOG1P38873 1557 aa13.62□□□□□ -0.23
MDH1YKL085W RSE1Q04693 1361 aaKnown RBP13.3□□□□□ -0.28
MDH1YKL085W SGS1P35187 1447 aa13.3□□□□□ -0.28
MDH1YKL085W HSL1P34244 1518 aa13.13□□□□□ -0.31
MDH1YKL085W SPT6P23615 1451 aaKnown RBP13.09□□□□□ -0.31
MDH1YKL085W FAP1P53971 965 aa12.92□□□□□ -0.34
MDH1YKL085W SPA2P23201 1466 aaKnown RBP12.89□□□□□ -0.35
MDH1YKL085W ECM5Q03214 1411 aa12.84□□□□□ -0.35
MDH1YKL085W HIR3P47171 1648 aa12.84□□□□□ -0.35
MDH1YKL085W THO2P53552 1597 aaKnown RBP12.77□□□□□ -0.36
MDH1YKL085W BUD4P47136 1447 aa12.73□□□□□ -0.37
MDH1YKL085W MDS3P53094 1487 aa12.65□□□□□ -0.38
MDH1YKL085W PEP1P32319 1579 aa12.56□□□□□ -0.4
MDH1YKL085W XRN1P22147 1528 aaKnown RBP12.53□□□□□ -0.4
MDH1YKL085W MTC1P47018 478 aaKnown RBP12.52□□□□□ -0.41
MDH1YKL085W ATG2P53855 1592 aa12.45□□□□□ -0.42
MDH1YKL085W REV3P14284 1504 aa12.44□□□□□ -0.42
MDH1YKL085W BPT1P14772 1559 aa12.31□□□□□ -0.44
MDH1YKL085W PRY3P47033 881 aa12.2□□□□□ -0.46
MDH1YKL085W SSN2P38931 1420 aa12.19□□□□□ -0.46
MDH1YKL085W SIN3P22579 1536 aa12.18□□□□□ -0.46
MDH1YKL085W SSK2P53599 1579 aa12.18□□□□□ -0.46
MDH1YKL085W SKI3P17883 1432 aaKnown RBP12.11□□□□□ -0.47
MDH1YKL085W YCF1P39109 1515 aaKnown RBP12.11□□□□□ -0.47
MDH1YKL085W TAF2P23255 1407 aa12.11□□□□□ -0.47
MDH1YKL085W ESP1Q03018 1630 aa12.04□□□□□ -0.48
MDH1YKL085W DRS1P32892 752 aaKnown RBP12.01□□□□□ -0.49
MDH1YKL085W UFD4P33202 1483 aa11.95□□□□□ -0.5
MDH1YKL085W SCC2Q04002 1493 aa11.89□□□□□ -0.51
MDH1YKL085W YPK9Q12697 1472 aa11.86□□□□□ -0.51
MDH1YKL085W TY2B-LR1P0C2J3 1770 aa11.82□□□□□ -0.52
MDH1YKL085W TY2B-FP0CX63 1770 aa11.82□□□□□ -0.52
MDH1YKL085W TY2B-GR2P0CX64 1770 aa11.82□□□□□ -0.52
MDH1YKL085W TY2B-CP25384 1770 aa11.82□□□□□ -0.52
MDH1YKL085W TY2B-DR2Q03494 1770 aa11.82□□□□□ -0.52
MDH1YKL085W TY1B-DR1Q03855 1755 aa11.82□□□□□ -0.52
MDH1YKL085W TY2B-DR3Q07791 1770 aaKnown RBP11.82□□□□□ -0.52
MDH1YKL085W TY2B-OR1Q12113 1770 aa11.82□□□□□ -0.52
MDH1YKL085W TY2B-DR1Q12472 1770 aa11.82□□□□□ -0.52
MDH1YKL085W TY2B-OR2Q12501 1770 aa11.82□□□□□ -0.52
MDH1YKL085W CDC25P04821 1589 aa11.82□□□□□ -0.52
MDH1YKL085W DNF1P32660 1571 aa11.81□□□□□ -0.52
MDH1YKL085W TY1B-BRQ12193 1756 aa11.79□□□□□ -0.52
MDH1YKL085W TY1B-GR3Q12316 1755 aa11.79□□□□□ -0.52
MDH1YKL085W TY1B-ORQ92393 1755 aa11.79□□□□□ -0.52
MDH1YKL085W ESC1Q03661 1658 aaKnown RBP11.79□□□□□ -0.52
MDH1YKL085W RPO31P04051 1460 aa11.79□□□□□ -0.52
MDH1YKL085W MYO2P19524 1574 aaKnown RBP11.79□□□□□ -0.52
MDH1YKL085W CHD1P32657 1468 aa11.77□□□□□ -0.52
MDH1YKL085W MET5P47169 1442 aa11.76□□□□□ -0.53
MDH1YKL085W RPA190P10964 1664 aaKnown RBP11.68□□□□□ -0.54
MDH1YKL085W BNI1P41832 1953 aa11.67□□□□□ -0.54
MDH1YKL085W RKR1Q04781 1562 aa11.67□□□□□ -0.54
MDH1YKL085W TY1B-HO13535 1793 aa11.66□□□□□ -0.54
MDH1YKL085W TY1B-DR5P0C2I2 1755 aa11.66□□□□□ -0.54
MDH1YKL085W TY1B-DR6P0C2I3 1755 aa11.66□□□□□ -0.54
MDH1YKL085W TY1B-LR2P0C2I5 1755 aa11.66□□□□□ -0.54
MDH1YKL085W TY1B-LR3P0C2I6 1755 aaKnown RBP11.66□□□□□ -0.54
MDH1YKL085W TY1B-PR1P0C2I9 1755 aaKnown RBP11.66□□□□□ -0.54
MDH1YKL085W TY1B-PR2P0C2J0 1756 aa11.66□□□□□ -0.54
MDH1YKL085W TY1B-PR3P0C2J1 1755 aaKnown RBP11.66□□□□□ -0.54
MDH1YKL085W TY1B-JR1P47098 1755 aa11.66□□□□□ -0.54
MDH1YKL085W TY1B-ML2Q03434 1755 aaKnown RBP11.66□□□□□ -0.54
MDH1YKL085W TY1B-ER1Q03612 1755 aa11.66□□□□□ -0.54
MDH1YKL085W TY1B-ML1Q04711 1755 aaKnown RBP11.66□□□□□ -0.54
MDH1YKL085W TY1B-GR2Q12269 1755 aa11.66□□□□□ -0.54
MDH1YKL085W TY1B-OLQ12273 1755 aa11.66□□□□□ -0.54
MDH1YKL085W TY1B-PLQ12414 1755 aaKnown RBP11.66□□□□□ -0.54
MDH1YKL085W TY2B-BQ12491 1770 aa11.66□□□□□ -0.54
MDH1YKL085W PAN1P32521 1480 aa11.65□□□□□ -0.54
MDH1YKL085W LTE1P07866 1435 aa11.64□□□□□ -0.55
MDH1YKL085W TY1B-DR3Q99231 1755 aa11.62□□□□□ -0.55
MDH1YKL085W MIF2P35201 549 aa11.62□□□□□ -0.55
MDH1YKL085W TOP2P06786 1428 aaKnown RBP11.56□□□□□ -0.56
MDH1YKL085W RQC2Q12532 1038 aaKnown RBP11.54□□□□□ -0.56
MDH1YKL085W YCK3P39962 524 aa11.5□□□□□ -0.57
MDH1YKL085W MMS22Q06164 1454 aa11.49□□□□□ -0.57
MDH1YKL085W GEA2P39993 1459 aaKnown RBP11.48□□□□□ -0.57
MDH1YKL085W YRF1-1P0CX20 1796 aa11.48□□□□□ -0.57
MDH1YKL085W YRF1-5P0CX21 1796 aa11.48□□□□□ -0.57
MDH1YKL085W YRF1-8P0CX22 1796 aa11.48□□□□□ -0.57
MDH1YKL085W ITT1Q04638 464 aa11.46□□□□□ -0.57
MDH1YKL085W POL1P13382 1468 aa11.41□□□□□ -0.58
MDH1YKL085W AAD16Q02895 342 aa11.41□□□□□ -0.58
MDH1YKL085W TRM732Q03496 1420 aa11.41□□□□□ -0.58
MDH1YKL085W TY1B-JR2P47100 1755 aaKnown RBP11.41□□□□□ -0.58
MDH1YKL085W TY1B-ER2Q03619 1755 aa11.41□□□□□ -0.58
MDH1YKL085W TY1B-MR1Q04214 1755 aa11.41□□□□□ -0.58
MDH1YKL085W TY1B-MR2Q04670 1755 aaKnown RBP11.41□□□□□ -0.58
MDH1YKL085W TY1B-LR1Q12088 1755 aaKnown RBP11.41□□□□□ -0.58
MDH1YKL085W TY1B-NL1Q12112 1755 aa11.41□□□□□ -0.58
MDH1YKL085W TY1B-GR1Q12141 1755 aa11.41□□□□□ -0.58
MDH1YKL085W TY1B-BLQ12490 1755 aa11.41□□□□□ -0.58
MDH1YKL085W HAA1Q12753 694 aaKnown RBP11.36□□□□□ -0.59
Retrieved 100 of 5,963 RNA–protein pairs in 13.1 ms