RNA–Protein interactions for RNA: YFL038C

YPT1, Transcript of Rab family GTPase, yeastyeast

Gene YPT1, Length 621 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT1YFL038C GIN4Q12263 1142 aa7.18□□□□□ -1.26
YPT1YFL038C YKL068W-AQ3E826 78 aa7.18□□□□□ -1.26
YPT1YFL038C MTF2P10849 440 aa7.17□□□□□ -1.26
YPT1YFL038C SPO12P17123 173 aa7.17□□□□□ -1.26
YPT1YFL038C ISY1P21374 235 aaPredicted RBP7.17□□□□□ -1.26
YPT1YFL038C SPB4P25808 606 aaPredicted RBP7.17□□□□□ -1.26
YPT1YFL038C RPS7AP26786 190 aaKnown RBP7.17□□□□□ -1.26
YPT1YFL038C CHS3P29465 1165 aa7.17□□□□□ -1.26
YPT1YFL038C PET10P36139 283 aa7.17□□□□□ -1.26
YPT1YFL038C ATG3P40344 310 aa7.17□□□□□ -1.26
YPT1YFL038C YAP5P40574 245 aa7.17□□□□□ -1.26
YPT1YFL038C DSE4P53753 1117 aa7.17□□□□□ -1.26
YPT1YFL038C BNI5P53890 448 aaKnown RBP7.17□□□□□ -1.26
YPT1YFL038C YOL075CQ08234 1294 aa7.17□□□□□ -1.26
YPT1YFL038C TUS1Q06412 1307 aa7.17□□□□□ -1.26
YPT1YFL038C OM45P16547 393 aa7.16□□□□□ -1.26
YPT1YFL038C RPO26P20435 155 aa7.16□□□□□ -1.26
YPT1YFL038C SRO9P25567 434 aaKnown RBP7.16□□□□□ -1.26
YPT1YFL038C SRB4P32569 687 aa7.16□□□□□ -1.26
YPT1YFL038C YKL091CP33324 310 aaKnown RBP7.16□□□□□ -1.26
YPT1YFL038C CCT4P39078 528 aaKnown RBP7.16□□□□□ -1.26
YPT1YFL038C CIT3P43635 486 aa7.16□□□□□ -1.26
YPT1YFL038C YJL171CP46992 396 aa7.16□□□□□ -1.26
YPT1YFL038C CBK1P53894 756 aa7.16□□□□□ -1.26
YPT1YFL038C RRB1Q04225 511 aaKnown RBP7.16□□□□□ -1.26
YPT1YFL038C DPL1Q05567 589 aa7.16□□□□□ -1.26
YPT1YFL038C ADY4Q05955 493 aa7.16□□□□□ -1.26
YPT1YFL038C RRG1Q12167 365 aaPredicted RBP7.16□□□□□ -1.26
YPT1YFL038C MYO1P08964 1928 aa7.16□□□□□ -1.26
YPT1YFL038C PPR1P07272 904 aaPredicted RBP7.15□□□□□ -1.26
YPT1YFL038C MAK16P10962 306 aaPredicted RBP7.15□□□□□ -1.26
YPT1YFL038C KIN1P13185 1064 aa7.15□□□□□ -1.26
YPT1YFL038C RPL8AP17076 256 aaKnown RBP7.15□□□□□ -1.26
YPT1YFL038C MSH1P25846 959 aa7.15□□□□□ -1.26
YPT1YFL038C BYE1P36106 594 aa7.15□□□□□ -1.26
YPT1YFL038C VPS45P38932 577 aa7.15□□□□□ -1.26
YPT1YFL038C MVP1P40959 511 aaKnown RBP7.15□□□□□ -1.26
YPT1YFL038C ROG3P43602 733 aa7.15□□□□□ -1.26
YPT1YFL038C MSN5P52918 1224 aa7.15□□□□□ -1.26
YPT1YFL038C UME1Q03010 460 aa7.15□□□□□ -1.26
YPT1YFL038C NGL3Q03210 505 aa7.15□□□□□ -1.26
YPT1YFL038C BUL2Q03758 920 aaKnown RBP7.15□□□□□ -1.26
YPT1YFL038C UTP13Q05946 817 aaKnown RBP7.15□□□□□ -1.26
YPT1YFL038C VIP1Q06685 1146 aaKnown RBP7.15□□□□□ -1.26
YPT1YFL038C CWC2Q12046 339 aaPredicted RBP7.15□□□□□ -1.26
YPT1YFL038C SMC6Q12749 1114 aa7.15□□□□□ -1.26
YPT1YFL038C YEL076C-AP0CX16 216 aa7.14□□□□□ -1.27
YPT1YFL038C YLR464WP0CX17 216 aa7.14□□□□□ -1.27
YPT1YFL038C CKI1P20485 582 aa7.14□□□□□ -1.27
YPT1YFL038C RAD57P25301 460 aa7.14□□□□□ -1.27
YPT1YFL038C RPC53P25441 422 aa7.14□□□□□ -1.27
YPT1YFL038C PDC6P26263 563 aaKnown RBP7.14□□□□□ -1.27
YPT1YFL038C HXT1P32465 570 aa7.14□□□□□ -1.27
YPT1YFL038C RPC25P35718 212 aa7.14□□□□□ -1.27
YPT1YFL038C MUD2P36084 527 aaKnown RBP7.14□□□□□ -1.27
YPT1YFL038C YEL076CP39971 216 aa7.14□□□□□ -1.27
YPT1YFL038C ATG23Q06671 453 aa7.14□□□□□ -1.27
YPT1YFL038C SPO75Q07798 868 aa7.14□□□□□ -1.27
YPT1YFL038C OSH2Q12451 1283 aa7.14□□□□□ -1.27
YPT1YFL038C FLO11P08640 1367 aa7.13□□□□□ -1.27
YPT1YFL038C CDC60P26637 1090 aaKnown RBP7.13□□□□□ -1.27
YPT1YFL038C CNS1P33313 385 aa7.13□□□□□ -1.27
YPT1YFL038C CST26P38226 397 aa7.13□□□□□ -1.27
YPT1YFL038C SMF1P38925 575 aa7.13□□□□□ -1.27
YPT1YFL038C SMC2P38989 1170 aaKnown RBP7.13□□□□□ -1.27
YPT1YFL038C UBP9P39967 754 aa7.13□□□□□ -1.27
YPT1YFL038C NUP82P40368 713 aa7.13□□□□□ -1.27
YPT1YFL038C LSB1P53281 241 aa7.13□□□□□ -1.27
YPT1YFL038C FUS2Q05670 677 aa7.13□□□□□ -1.27
YPT1YFL038C OPY2Q06810 360 aa7.13□□□□□ -1.27
YPT1YFL038C YDL124WQ07551 312 aaKnown RBP7.13□□□□□ -1.27
YPT1YFL038C DAS2Q12084 232 aa7.13□□□□□ -1.27
YPT1YFL038C CTT1P06115 562 aa7.12□□□□□ -1.27
YPT1YFL038C TOM70P07213 617 aaKnown RBP7.12□□□□□ -1.27
YPT1YFL038C SSB1P11484 613 aaKnown RBP7.12□□□□□ -1.27
YPT1YFL038C GSY1P23337 708 aa7.12□□□□□ -1.27
YPT1YFL038C APL1P27351 700 aa7.12□□□□□ -1.27
YPT1YFL038C ICL1P28240 557 aaPredicted RBP7.12□□□□□ -1.27
YPT1YFL038C AFG2P32794 780 aa7.12□□□□□ -1.27
YPT1YFL038C NFU1P32860 256 aa7.12□□□□□ -1.27
YPT1YFL038C ISW1P38144 1129 aa7.12□□□□□ -1.27
YPT1YFL038C PAN5P38787 379 aa7.12□□□□□ -1.27
YPT1YFL038C ORC6P38826 435 aa7.12□□□□□ -1.27
YPT1YFL038C SSB2P40150 613 aaKnown RBP7.12□□□□□ -1.27
YPT1YFL038C RAD26P40352 1085 aa7.12□□□□□ -1.27
YPT1YFL038C HUL4P40985 892 aa7.12□□□□□ -1.27
YPT1YFL038C IES1P43579 692 aa7.12□□□□□ -1.27
YPT1YFL038C MFM1Q02783 413 aa7.12□□□□□ -1.27
YPT1YFL038C NOP6Q07623 225 aaKnown RBP7.12□□□□□ -1.27
YPT1YFL038C TCO89Q08921 799 aa7.12□□□□□ -1.27
YPT1YFL038C RMP1Q12530 201 aa7.12□□□□□ -1.27
YPT1YFL038C RPS9BP05755 195 aaKnown RBP7.11□□□□□ -1.27
YPT1YFL038C SAM2P19358 384 aaKnown RBP7.11□□□□□ -1.27
YPT1YFL038C PWP2P25635 923 aaKnown RBP7.11□□□□□ -1.27
YPT1YFL038C GAA1P39012 614 aa7.11□□□□□ -1.27
YPT1YFL038C EMP47P43555 445 aa7.11□□□□□ -1.27
YPT1YFL038C CTK3P46963 296 aaPredicted RBP7.11□□□□□ -1.27
YPT1YFL038C SMC3P47037 1230 aa7.11□□□□□ -1.27
YPT1YFL038C CCM1P48237 864 aaPredicted RBP7.11□□□□□ -1.27
YPT1YFL038C SNU71P53207 620 aaKnown RBP7.11□□□□□ -1.27
Retrieved 100 of 5,963 RNA–protein pairs in 101.6 ms