RNA–Protein interactions for RNA: YER111C

SWI4, Transcript of DNA binding component of the SBF complex (Swi4p-Swi6p), yeastyeast

Gene SWI4, Length 3,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI4YER111C NUG1P40010 520 aaKnown RBP1.72□□□□□ -2.13
SWI4YER111C ELA1P53861 379 aaPredicted RBP1.72□□□□□ -2.13
SWI4YER111C CUZ1P53899 274 aa1.72□□□□□ -2.13
SWI4YER111C TY1A-DR2Q03964 440 aaKnown RBP1.72□□□□□ -2.13
SWI4YER111C SOG2Q08817 791 aa1.72□□□□□ -2.13
SWI4YER111C TY1A-GR1Q12085 440 aa1.72□□□□□ -2.13
SWI4YER111C TY1A-PR3Q6Q5H1 440 aaKnown RBP1.72□□□□□ -2.13
SWI4YER111C TY1A-OLQ92392 440 aaKnown RBP1.72□□□□□ -2.13
SWI4YER111C ESC1Q03661 1658 aaKnown RBP1.72□□□□□ -2.13
SWI4YER111C GBP2P25555 427 aaKnown RBP RIP-Chip data1.72□□□□□ -2.13not detected
SWI4YER111C UBP12P39538 1254 aa1.72□□□□□ -2.13
SWI4YER111C YAR028WP39548 234 aa1.72□□□□□ -2.13
SWI4YER111C GDH3P39708 457 aa1.72□□□□□ -2.13
SWI4YER111C GNP1P48813 663 aa1.72□□□□□ -2.13
SWI4YER111C HNT2P49775 206 aa1.72□□□□□ -2.13
SWI4YER111C GUP1P53154 560 aa1.72□□□□□ -2.13
SWI4YER111C YGL081WP53156 320 aa1.72□□□□□ -2.13
SWI4YER111C SPO71Q03868 1245 aa1.72□□□□□ -2.13
SWI4YER111C ADE8P04161 214 aa1.72□□□□□ -2.13
SWI4YER111C TOP3P13099 656 aa1.72□□□□□ -2.13
SWI4YER111C DBP5P20449 482 aaKnown RBP1.72□□□□□ -2.13
SWI4YER111C RAD53P22216 821 aa1.72□□□□□ -2.13
SWI4YER111C GSY1P23337 708 aa1.72□□□□□ -2.13
SWI4YER111C ALG14P38242 237 aa1.72□□□□□ -2.13
SWI4YER111C NMD3P38861 518 aaKnown RBP1.72□□□□□ -2.13
SWI4YER111C HXT13P39924 564 aa1.72□□□□□ -2.13
SWI4YER111C SDA1P53313 767 aaKnown RBP1.72□□□□□ -2.13
SWI4YER111C HXT17P53631 564 aa1.72□□□□□ -2.13
SWI4YER111C FOL1P53848 824 aa1.72□□□□□ -2.13
SWI4YER111C HXT15P54854 567 aa1.72□□□□□ -2.13
SWI4YER111C MEC3Q02574 474 aa1.72□□□□□ -2.13
SWI4YER111C GIC2Q06648 383 aa1.72□□□□□ -2.13
SWI4YER111C YOL057WQ08225 711 aa1.72□□□□□ -2.13
SWI4YER111C YLL054CQ12244 843 aa1.72□□□□□ -2.13
SWI4YER111C HBN1Q96VH4 193 aa1.72□□□□□ -2.13
SWI4YER111C RPL8AP17076 256 aaKnown RBP1.71□□□□□ -2.14
SWI4YER111C SAC7P17121 654 aa1.71□□□□□ -2.14
SWI4YER111C BET3P36149 193 aa1.71□□□□□ -2.14
SWI4YER111C RDH54P38086 958 aa1.71□□□□□ -2.14
SWI4YER111C GPB2P39717 880 aa1.71□□□□□ -2.14
SWI4YER111C ROG3P43602 733 aa1.71□□□□□ -2.14
SWI4YER111C YGR237CP50089 785 aa1.71□□□□□ -2.14
SWI4YER111C YNR029CP53729 429 aaKnown RBP1.71□□□□□ -2.14
SWI4YER111C TAF8Q03750 510 aa1.71□□□□□ -2.14
SWI4YER111C FAP7Q12055 197 aaPredicted RBP1.71□□□□□ -2.14
SWI4YER111C TOP1P04786 769 aa1.71□□□□□ -2.14
SWI4YER111C SCT1P32784 759 aa1.71□□□□□ -2.14
SWI4YER111C PFD1P46988 109 aa1.71□□□□□ -2.14
SWI4YER111C DAS1P47005 663 aa1.71□□□□□ -2.14
SWI4YER111C ENT3P47160 408 aa1.71□□□□□ -2.14
SWI4YER111C ZDS1P50111 915 aaKnown RBP1.71□□□□□ -2.14
SWI4YER111C YGR045CP53229 120 aa1.71□□□□□ -2.14
SWI4YER111C ATG13Q06628 738 aa1.71□□□□□ -2.14
SWI4YER111C SPO21Q12411 609 aa1.71□□□□□ -2.14
SWI4YER111C RAD18P10862 487 aa1.71□□□□□ -2.14
SWI4YER111C RET1P22276 1149 aaKnown RBP1.71□□□□□ -2.14
SWI4YER111C VBA3P25594 458 aa1.71□□□□□ -2.14
SWI4YER111C GAR1P28007 205 aaKnown RBP1.71□□□□□ -2.14
SWI4YER111C MAE1P36013 669 aaKnown RBP1.71□□□□□ -2.14
SWI4YER111C RGD1P38339 666 aa1.71□□□□□ -2.14
SWI4YER111C LEM3P42838 414 aa1.71□□□□□ -2.14
SWI4YER111C NPL3Q01560 414 aaKnown RBP RIP-Chip data1.71□□□□□ -2.14not detected
SWI4YER111C SRP1Q02821 542 aaKnown RBP1.71□□□□□ -2.14
SWI4YER111C ELG1Q12050 791 aa1.71□□□□□ -2.14
SWI4YER111C YPL066WQ12194 479 aa1.71□□□□□ -2.14
SWI4YER111C NYV1Q12255 253 aa1.71□□□□□ -2.14
SWI4YER111C TY1A-BLQ12266 440 aa1.71□□□□□ -2.14
SWI4YER111C BNI1P41832 1953 aa1.7□□□□□ -2.14
SWI4YER111C MSC7P38694 644 aa1.7□□□□□ -2.14
SWI4YER111C MXR1P40029 184 aa1.7□□□□□ -2.14
SWI4YER111C NIT1P40447 199 aa1.7□□□□□ -2.14
SWI4YER111C KIP3P53086 805 aaKnown RBP1.7□□□□□ -2.14
SWI4YER111C YNL193WP53870 558 aa1.7□□□□□ -2.14
SWI4YER111C UGO1Q03327 502 aa1.7□□□□□ -2.14
SWI4YER111C MTC5Q03897 1148 aa1.7□□□□□ -2.14
SWI4YER111C YDR444WQ04093 687 aa1.7□□□□□ -2.14
SWI4YER111C TMA17Q12513 150 aa1.7□□□□□ -2.14
SWI4YER111C MSD1P15179 658 aaKnown RBP1.7□□□□□ -2.14
SWI4YER111C KIP1P28742 1111 aa1.7□□□□□ -2.14
SWI4YER111C AMN1P38285 549 aaPredicted RBP1.7□□□□□ -2.14
SWI4YER111C VPS53P47061 822 aa1.7□□□□□ -2.14
SWI4YER111C PMT3P47190 753 aa1.7□□□□□ -2.14
SWI4YER111C CAF120P53836 1060 aa1.7□□□□□ -2.14
SWI4YER111C DOT1Q04089 582 aaKnown RBP1.7□□□□□ -2.14
SWI4YER111C TY1A-MR1Q04215 440 aa1.7□□□□□ -2.14
SWI4YER111C YLR257WQ06146 321 aaKnown RBP1.7□□□□□ -2.14
SWI4YER111C THI73Q07904 523 aa1.7□□□□□ -2.14
SWI4YER111C GNT1Q12096 491 aa1.7□□□□□ -2.14
SWI4YER111C YER152CP10356 443 aa1.69□□□□□ -2.14
SWI4YER111C SSD1P24276 1250 aaKnown RBP RIP-Chip data1.69□□□□□ -2.14not detected
SWI4YER111C AFG2P32794 780 aa1.69□□□□□ -2.14
SWI4YER111C TYS1P36421 394 aaKnown RBP1.69□□□□□ -2.14
SWI4YER111C YBR238CP38330 731 aaKnown RBP1.69□□□□□ -2.14
SWI4YER111C QNS1P38795 714 aaKnown RBP1.69□□□□□ -2.14
SWI4YER111C ALG2P43636 503 aa1.69□□□□□ -2.14
SWI4YER111C ATG36P46983 293 aa1.69□□□□□ -2.14
SWI4YER111C SUB1P54000 292 aaKnown RBP1.69□□□□□ -2.14
SWI4YER111C YPR196WQ06595 470 aa1.69□□□□□ -2.14
SWI4YER111C ERS1P17261 260 aa1.69□□□□□ -2.14
SWI4YER111C MET22P32179 357 aa1.69□□□□□ -2.14
Retrieved 100 of 5,963 RNA–protein pairs in 33.5 ms