RNA–Protein interactions for RNA: YER111C

SWI4, Transcript of DNA binding component of the SBF complex (Swi4p-Swi6p), yeastyeast

Gene SWI4, Length 3,282 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI4YER111C DRS1P32892 752 aaKnown RBP3.76□□□□□ -1.81
SWI4YER111C MTC1P47018 478 aaKnown RBP3.5□□□□□ -1.85
SWI4YER111C BFR2Q06631 534 aaKnown RBP3.34□□□□□ -1.87
SWI4YER111C TFA1P36100 482 aa3.19□□□□□ -1.9
SWI4YER111C DIP2Q12220 943 aaPredicted RBP3.12□□□□□ -1.91
SWI4YER111C AVT3P36062 692 aa3.05□□□□□ -1.92
SWI4YER111C RQC2Q12532 1038 aaKnown RBP2.98□□□□□ -1.93
SWI4YER111C FAP1P53971 965 aa2.94□□□□□ -1.94
SWI4YER111C RSE1Q04693 1361 aaKnown RBP2.9□□□□□ -1.95
SWI4YER111C ISW2Q08773 1120 aa2.83□□□□□ -1.96
SWI4YER111C RPL17AP05740 184 aaKnown RBP2.81□□□□□ -1.96
SWI4YER111C RPG1P38249 964 aaKnown RBP2.81□□□□□ -1.96
SWI4YER111C RPL17BP46990 184 aaKnown RBP2.81□□□□□ -1.96
SWI4YER111C PRY3P47033 881 aa2.78□□□□□ -1.97
SWI4YER111C PTP3P40048 928 aa2.77□□□□□ -1.97
SWI4YER111C REB1P21538 810 aa2.76□□□□□ -1.97
SWI4YER111C DMA1P38823 416 aa2.76□□□□□ -1.97
SWI4YER111C PRI1P10363 409 aa2.69□□□□□ -1.98
SWI4YER111C AAD16Q02895 342 aa2.67□□□□□ -1.98
SWI4YER111C YAH1Q12184 172 aaKnown RBP2.66□□□□□ -1.98
SWI4YER111C SSP1P38871 571 aa2.65□□□□□ -1.99
SWI4YER111C TSR3Q12094 313 aaKnown RBP2.64□□□□□ -1.99
SWI4YER111C RIM101P33400 625 aa2.63□□□□□ -1.99
SWI4YER111C YIL055CP40523 627 aaKnown RBP2.63□□□□□ -1.99
SWI4YER111C TAF7Q05021 590 aa2.62□□□□□ -1.99
SWI4YER111C ARP8Q12386 881 aaKnown RBP RIP-Chip data2.61□□□□□ -1.99not detected
SWI4YER111C SPT21P35209 758 aa2.6□□□□□ -1.99
SWI4YER111C OXP1P28273 1286 aa2.58□□□□□ -2
SWI4YER111C LEO1P38439 464 aa2.54□□□□□ -2
SWI4YER111C YLR271WQ06152 274 aa2.54□□□□□ -2
SWI4YER111C MRPL32P25348 183 aa2.54□□□□□ -2
SWI4YER111C HOP09932 586 aa2.53□□□□□ -2
SWI4YER111C RSM7P47150 247 aa2.53□□□□□ -2
SWI4YER111C MGA2P40578 1113 aa2.51□□□□□ -2.01
SWI4YER111C YKR023WP36119 530 aaKnown RBP2.51□□□□□ -2.01
SWI4YER111C HAA1Q12753 694 aaKnown RBP2.51□□□□□ -2.01
SWI4YER111C DCD1P06773 312 aa2.5□□□□□ -2.01
SWI4YER111C CST9Q06032 482 aa2.48□□□□□ -2.01
SWI4YER111C SPB4P25808 606 aaPredicted RBP2.47□□□□□ -2.01
SWI4YER111C TFC8Q12308 588 aa2.47□□□□□ -2.01
SWI4YER111C AI2P03876 854 aa2.46□□□□□ -2.01
SWI4YER111C BUD31P25337 157 aaPredicted RBP2.46□□□□□ -2.02
SWI4YER111C BBC1P47068 1157 aa2.46□□□□□ -2.02
SWI4YER111C LEU3P08638 886 aa2.44□□□□□ -2.02
SWI4YER111C CDC27P38042 758 aa2.44□□□□□ -2.02
SWI4YER111C SAS10Q12136 610 aaPredicted RBP2.44□□□□□ -2.02
SWI4YER111C VPS70P47161 811 aa2.43□□□□□ -2.02
SWI4YER111C DMA2P53924 522 aa2.43□□□□□ -2.02
SWI4YER111C MRM1P25270 412 aa2.42□□□□□ -2.02
SWI4YER111C BCH2P36122 765 aa2.42□□□□□ -2.02
SWI4YER111C PSD2P53037 1138 aaKnown RBP2.42□□□□□ -2.02
SWI4YER111C RPN1P38764 993 aaKnown RBP2.42□□□□□ -2.02
SWI4YER111C SET1P38827 1080 aaKnown RBP2.41□□□□□ -2.02
SWI4YER111C RAM2P29703 316 aa2.4□□□□□ -2.02
SWI4YER111C SIS1P25294 352 aaKnown RBP2.39□□□□□ -2.03
SWI4YER111C EPS1P40557 701 aa2.39□□□□□ -2.03
SWI4YER111C CKB1P43639 278 aa2.39□□□□□ -2.03
SWI4YER111C SCY1P53009 804 aa2.38□□□□□ -2.03
SWI4YER111C RCR1P38212 213 aa2.38□□□□□ -2.03
SWI4YER111C RTG3P38165 486 aa2.37□□□□□ -2.03
SWI4YER111C BDF1P35817 686 aa2.36□□□□□ -2.03
SWI4YER111C IFH1P39520 1085 aa2.36□□□□□ -2.03
SWI4YER111C MIF2P35201 549 aa2.36□□□□□ -2.03
SWI4YER111C PBS2P08018 668 aa2.34□□□□□ -2.03
SWI4YER111C COQ8P27697 501 aa2.33□□□□□ -2.04
SWI4YER111C YCK3P39962 524 aa2.33□□□□□ -2.04
SWI4YER111C MAK11P20484 414 aaKnown RBP2.33□□□□□ -2.04
SWI4YER111C YFR006WP43590 535 aa2.33□□□□□ -2.04
SWI4YER111C KIN1P13185 1064 aa2.32□□□□□ -2.04
SWI4YER111C MAP2P38174 421 aaKnown RBP2.32□□□□□ -2.04
SWI4YER111C HGH1P48362 394 aaKnown RBP2.32□□□□□ -2.04
SWI4YER111C GLC3P32775 704 aa2.32□□□□□ -2.04
SWI4YER111C ATF2P53296 535 aa2.32□□□□□ -2.04
SWI4YER111C YPR148CQ06523 435 aa2.32□□□□□ -2.04
SWI4YER111C RLF2Q12495 606 aa2.32□□□□□ -2.04
SWI4YER111C SLX5P32828 619 aaKnown RBP2.31□□□□□ -2.04
SWI4YER111C MAM3Q12296 706 aa2.31□□□□□ -2.04
SWI4YER111C IES2P40154 320 aa2.31□□□□□ -2.04
SWI4YER111C REF2P42073 533 aaPredicted RBP2.31□□□□□ -2.04
SWI4YER111C VPS29P38759 282 aa2.3□□□□□ -2.04
SWI4YER111C PIB1Q06651 286 aa2.3□□□□□ -2.04
SWI4YER111C MON2P48563 1636 aaPredicted RBP2.3□□□□□ -2.04
SWI4YER111C DBP1P24784 617 aaKnown RBP2.3□□□□□ -2.04
SWI4YER111C DSF2P38213 736 aa2.3□□□□□ -2.04
SWI4YER111C YNR021WP53723 404 aaKnown RBP2.3□□□□□ -2.04
SWI4YER111C DIT2P21595 489 aa2.29□□□□□ -2.04
SWI4YER111C YMR1P47147 688 aaKnown RBP RIP-Chip data2.29□□□□□ -2.04not detected
SWI4YER111C YGL015CP33199 130 aa2.28□□□□□ -2.04
SWI4YER111C EDS1P38073 919 aa2.28□□□□□ -2.04
SWI4YER111C UBP10P53874 792 aaPredicted RBP2.28□□□□□ -2.04
SWI4YER111C YOR238WQ08634 303 aa2.28□□□□□ -2.04
SWI4YER111C STS1P38637 319 aa2.27□□□□□ -2.05
SWI4YER111C KIC1P38692 1080 aa2.27□□□□□ -2.05
SWI4YER111C VHR2P40041 505 aa2.27□□□□□ -2.05
SWI4YER111C GUA1P38625 525 aaKnown RBP2.26□□□□□ -2.05
SWI4YER111C PTC3P34221 468 aaKnown RBP2.26□□□□□ -2.05
SWI4YER111C ATH1P48016 1211 aa2.26□□□□□ -2.05
SWI4YER111C ABP1P15891 592 aaKnown RBP2.25□□□□□ -2.05
SWI4YER111C NOP53Q12080 455 aaKnown RBP2.25□□□□□ -2.05
SWI4YER111C AIM7Q12156 149 aa2.25□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 45.3 ms