RNA–Protein interactions for RNA: YDR395W

SXM1, Transcript of Nuclear transport factor (karyopherin), yeastyeast

Gene SXM1, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SXM1YDR395W TIF1P10081 395 aaKnown RBP1.84□□□□□ -2.11
SXM1YDR395W HOM2P13663 365 aaKnown RBP1.84□□□□□ -2.11
SXM1YDR395W ATE1P16639 503 aa1.84□□□□□ -2.11
SXM1YDR395W DEF1P35732 738 aaKnown RBP1.84□□□□□ -2.11
SXM1YDR395W RPT2P40327 437 aaKnown RBP1.84□□□□□ -2.11
SXM1YDR395W HOS4P40480 1083 aa1.84□□□□□ -2.11
SXM1YDR395W VTC4P47075 721 aa1.84□□□□□ -2.11
SXM1YDR395W RAV1P47104 1357 aa1.84□□□□□ -2.11
SXM1YDR395W UBP2Q01476 1272 aa1.84□□□□□ -2.11
SXM1YDR395W TMA64Q04600 565 aaKnown RBP1.84□□□□□ -2.11
SXM1YDR395W APC11Q12157 165 aa1.84□□□□□ -2.11
SXM1YDR395W MMP1Q12372 583 aa1.84□□□□□ -2.11
SXM1YDR395W NKP1Q12493 238 aa1.84□□□□□ -2.11
SXM1YDR395W CIT2P08679 460 aa1.84□□□□□ -2.12
SXM1YDR395W STE6P12866 1290 aa1.84□□□□□ -2.12
SXM1YDR395W PUP1P25043 261 aa1.84□□□□□ -2.12
SXM1YDR395W PWP2P25635 923 aaKnown RBP1.84□□□□□ -2.12
SXM1YDR395W NAB2P32505 525 aaKnown RBP RIP-Chip data1.84□□□□□ -2.12not detected
SXM1YDR395W MFT1P33441 392 aaKnown RBP1.84□□□□□ -2.12
SXM1YDR395W RRP14P36080 434 aaKnown RBP1.84□□□□□ -2.12
SXM1YDR395W PPE1P38796 400 aa1.84□□□□□ -2.12
SXM1YDR395W IOC3P43596 787 aa1.84□□□□□ -2.12
SXM1YDR395W YGL081WP53156 320 aa1.84□□□□□ -2.12
SXM1YDR395W LSC2P53312 427 aa1.84□□□□□ -2.12
SXM1YDR395W ALG12P53730 551 aa1.84□□□□□ -2.12
SXM1YDR395W RPN4Q03465 531 aa1.84□□□□□ -2.12
SXM1YDR395W GRX3Q03835 250 aa1.84□□□□□ -2.12
SXM1YDR395W YLR346CQ06139 101 aa1.84□□□□□ -2.12
SXM1YDR395W MMR1Q06324 491 aa1.84□□□□□ -2.12
SXM1YDR395W MSC6Q08818 692 aaKnown RBP1.84□□□□□ -2.12
SXM1YDR395W TRL1P09880 827 aaKnown RBP1.83□□□□□ -2.12
SXM1YDR395W HPR1P17629 752 aaKnown RBP1.83□□□□□ -2.12
SXM1YDR395W SEC15P22224 910 aa1.83□□□□□ -2.12
SXM1YDR395W SSD1P24276 1250 aaKnown RBP RIP-Chip data1.83□□□□□ -2.12not detected
SXM1YDR395W BIO2P32451 375 aa1.83□□□□□ -2.12
SXM1YDR395W LIP5P32875 414 aa1.83□□□□□ -2.12
SXM1YDR395W MPE1P35728 441 aaKnown RBP1.83□□□□□ -2.12
SXM1YDR395W SKN7P38889 622 aa1.83□□□□□ -2.12
SXM1YDR395W CUZ1P53899 274 aa1.83□□□□□ -2.12
SXM1YDR395W TRM44Q02648 567 aaKnown RBP1.83□□□□□ -2.12
SXM1YDR395W YOL057WQ08225 711 aa1.83□□□□□ -2.12
SXM1YDR395W FKS1P38631 1876 aaKnown RBP1.83□□□□□ -2.12
SXM1YDR395W PHR1P05066 565 aaKnown RBP RIP-Chip data1.83□□□□□ -2.12not detected
SXM1YDR395W RPA135P22138 1203 aaKnown RBP1.83□□□□□ -2.12
SXM1YDR395W SEC20P28791 383 aa1.83□□□□□ -2.12
SXM1YDR395W VPS24P36095 224 aaKnown RBP1.83□□□□□ -2.12
SXM1YDR395W PAF1P38351 445 aa1.83□□□□□ -2.12
SXM1YDR395W PPX1P38698 397 aa1.83□□□□□ -2.12
SXM1YDR395W VPS27P40343 622 aaKnown RBP1.83□□□□□ -2.12
SXM1YDR395W APL6P46682 809 aa1.83□□□□□ -2.12
SXM1YDR395W MET13P53128 600 aa1.83□□□□□ -2.12
SXM1YDR395W ESF2P53743 316 aaKnown RBP1.83□□□□□ -2.12
SXM1YDR395W DNM1P54861 757 aa1.83□□□□□ -2.12
SXM1YDR395W BDF2Q07442 638 aa1.83□□□□□ -2.12
SXM1YDR395W RRG1Q12167 365 aaPredicted RBP1.83□□□□□ -2.12
SXM1YDR395W HAT1Q12341 374 aa1.83□□□□□ -2.12
SXM1YDR395W RPO41P13433 1351 aaKnown RBP1.82□□□□□ -2.12
SXM1YDR395W FMP27Q06179 2628 aa1.82□□□□□ -2.12
SXM1YDR395W ARG82P07250 355 aa1.82□□□□□ -2.12
SXM1YDR395W TAT2P38967 592 aa1.82□□□□□ -2.12
SXM1YDR395W PNT1P38969 423 aa1.82□□□□□ -2.12
SXM1YDR395W UBP5P39944 805 aa1.82□□□□□ -2.12
SXM1YDR395W RPL34AP87262 121 aaPredicted RBP1.82□□□□□ -2.12
SXM1YDR395W CEF1Q03654 590 aaPredicted RBP1.82□□□□□ -2.12
SXM1YDR395W ENT2Q05785 613 aa1.82□□□□□ -2.12
SXM1YDR395W WHI5Q12416 295 aa1.82□□□□□ -2.12
SXM1YDR395W NHA1Q99271 985 aa1.82□□□□□ -2.12
SXM1YDR395W MSB2P32334 1306 aa1.82□□□□□ -2.12
SXM1YDR395W TSR4P25040 408 aa1.82□□□□□ -2.12
SXM1YDR395W DAL1P32375 460 aa1.82□□□□□ -2.12
SXM1YDR395W FBP26P32604 452 aa1.82□□□□□ -2.12
SXM1YDR395W SSN3P39073 555 aa1.82□□□□□ -2.12
SXM1YDR395W MPP10P47083 593 aaKnown RBP1.82□□□□□ -2.12
SXM1YDR395W RSM10Q03201 203 aa1.82□□□□□ -2.12
SXM1YDR395W YML083CQ04526 418 aa1.82□□□□□ -2.12
SXM1YDR395W SSF2Q12153 453 aaPredicted RBP1.82□□□□□ -2.12
SXM1YDR395W CHO2P05374 869 aaKnown RBP1.81□□□□□ -2.12
SXM1YDR395W LPD1P09624 499 aaKnown RBP1.81□□□□□ -2.12
SXM1YDR395W SUP45P12385 437 aaKnown RBP1.81□□□□□ -2.12
SXM1YDR395W YCK2P23292 546 aaKnown RBP1.81□□□□□ -2.12
SXM1YDR395W GLO3P38682 493 aaKnown RBP1.81□□□□□ -2.12
SXM1YDR395W UBP12P39538 1254 aa1.81□□□□□ -2.12
SXM1YDR395W RTR1P40084 226 aaPredicted RBP1.81□□□□□ -2.12
SXM1YDR395W MMF1P40185 145 aaKnown RBP1.81□□□□□ -2.12
SXM1YDR395W TBF1Q02457 562 aa1.81□□□□□ -2.12
SXM1YDR395W COG4Q06096 861 aa1.81□□□□□ -2.12
SXM1YDR395W SYT1Q06836 1226 aa1.81□□□□□ -2.12
SXM1YDR395W PPZ1P26570 692 aa1.81□□□□□ -2.12
SXM1YDR395W FUI1P38196 639 aa1.81□□□□□ -2.12
SXM1YDR395W ERP2P39704 215 aa1.81□□□□□ -2.12
SXM1YDR395W NOC2P39744 710 aaKnown RBP1.81□□□□□ -2.12
SXM1YDR395W VAB2P40003 282 aa1.81□□□□□ -2.12
SXM1YDR395W LSB6P42951 607 aa1.81□□□□□ -2.12
SXM1YDR395W RSM26P47141 266 aa1.81□□□□□ -2.12
SXM1YDR395W LYS5P50113 272 aa1.81□□□□□ -2.12
SXM1YDR395W ITC1P53125 1264 aa1.81□□□□□ -2.12
SXM1YDR395W DFG5Q05031 458 aa1.81□□□□□ -2.12
SXM1YDR395W MRX10Q05648 414 aa1.81□□□□□ -2.12
SXM1YDR395W PSK2Q08217 1101 aa1.81□□□□□ -2.12
SXM1YDR395W YPR204WQ08995 1032 aa1.81□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 78.5 ms