RNA–Protein interactions for RNA: YDR395W

SXM1, Transcript of Nuclear transport factor (karyopherin), yeastyeast

Gene SXM1, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SXM1YDR395W MON2P48563 1636 aaPredicted RBP4.68□□□□□ -1.66
SXM1YDR395W INO80P53115 1489 aa4.44□□□□□ -1.7
SXM1YDR395W RSE1Q04693 1361 aaKnown RBP4.44□□□□□ -1.7
SXM1YDR395W MIF2P35201 549 aa4.36□□□□□ -1.71
SXM1YDR395W SPA2P23201 1466 aaKnown RBP4.31□□□□□ -1.72
SXM1YDR395W MTC1P47018 478 aaKnown RBP4.31□□□□□ -1.72
SXM1YDR395W KOG1P38873 1557 aa4.29□□□□□ -1.72
SXM1YDR395W DNA2P38859 1522 aa4.22□□□□□ -1.73
SXM1YDR395W SWR1Q05471 1514 aa4.04□□□□□ -1.76
SXM1YDR395W FAP1P53971 965 aa4.03□□□□□ -1.76
SXM1YDR395W YFR006WP43590 535 aa3.96□□□□□ -1.78
SXM1YDR395W YCK3P39962 524 aa3.89□□□□□ -1.79
SXM1YDR395W PRY3P47033 881 aa3.84□□□□□ -1.79
SXM1YDR395W PRI1P10363 409 aa3.8□□□□□ -1.8
SXM1YDR395W DNF1P32660 1571 aa3.76□□□□□ -1.81
SXM1YDR395W REV3P14284 1504 aa3.75□□□□□ -1.81
SXM1YDR395W AAD16Q02895 342 aa3.73□□□□□ -1.81
SXM1YDR395W TY1B-DR4Q07793 1604 aa3.71□□□□□ -1.82
SXM1YDR395W DRS1P32892 752 aaKnown RBP3.7□□□□□ -1.82
SXM1YDR395W MYO2P19524 1574 aaKnown RBP3.69□□□□□ -1.82
SXM1YDR395W MDS3P53094 1487 aa3.69□□□□□ -1.82
SXM1YDR395W TCB3Q03640 1545 aaKnown RBP3.68□□□□□ -1.82
SXM1YDR395W IRC20Q06554 1556 aa3.68□□□□□ -1.82
SXM1YDR395W LTE1P07866 1435 aa3.66□□□□□ -1.82
SXM1YDR395W THO2P53552 1597 aaKnown RBP3.65□□□□□ -1.83
SXM1YDR395W PEP1P32319 1579 aa3.61□□□□□ -1.83
SXM1YDR395W HAA1Q12753 694 aaKnown RBP3.58□□□□□ -1.84
SXM1YDR395W SSK2P53599 1579 aa3.57□□□□□ -1.84
SXM1YDR395W MET5P47169 1442 aa3.57□□□□□ -1.84
SXM1YDR395W RPG1P38249 964 aaKnown RBP3.56□□□□□ -1.84
SXM1YDR395W ESC1Q03661 1658 aaKnown RBP3.55□□□□□ -1.84
SXM1YDR395W BNI1P41832 1953 aa3.54□□□□□ -1.84
SXM1YDR395W TSR3Q12094 313 aaKnown RBP3.53□□□□□ -1.84
SXM1YDR395W ISW2Q08773 1120 aa3.52□□□□□ -1.85
SXM1YDR395W YOR093CQ12275 1648 aa3.52□□□□□ -1.85
SXM1YDR395W RPA190P10964 1664 aaKnown RBP3.5□□□□□ -1.85
SXM1YDR395W BPT1P14772 1559 aa3.5□□□□□ -1.85
SXM1YDR395W ABP1P15891 592 aaKnown RBP3.49□□□□□ -1.85
SXM1YDR395W BUD4P47136 1447 aa3.48□□□□□ -1.85
SXM1YDR395W CDC25P04821 1589 aa3.47□□□□□ -1.85
SXM1YDR395W GEA2P39993 1459 aaKnown RBP3.46□□□□□ -1.85
SXM1YDR395W YCF1P39109 1515 aaKnown RBP3.45□□□□□ -1.86
SXM1YDR395W HIR3P47171 1648 aa3.44□□□□□ -1.86
SXM1YDR395W ECM5Q03214 1411 aa3.43□□□□□ -1.86
SXM1YDR395W RPO31P04051 1460 aa3.42□□□□□ -1.86
SXM1YDR395W MMS1Q06211 1407 aa3.4□□□□□ -1.86
SXM1YDR395W SGS1P35187 1447 aa3.38□□□□□ -1.87
SXM1YDR395W DNF2Q12675 1612 aa3.38□□□□□ -1.87
SXM1YDR395W DIP2Q12220 943 aaPredicted RBP3.37□□□□□ -1.87
SXM1YDR395W NTE1Q04958 1679 aa3.37□□□□□ -1.87
SXM1YDR395W PDR15Q04182 1529 aaKnown RBP3.35□□□□□ -1.87
SXM1YDR395W MRPL32P25348 183 aa3.3□□□□□ -1.88
SXM1YDR395W RKR1Q04781 1562 aa3.3□□□□□ -1.88
SXM1YDR395W SIN3P22579 1536 aa3.3□□□□□ -1.88
SXM1YDR395W SPT6P23615 1451 aaKnown RBP3.27□□□□□ -1.89
SXM1YDR395W AVT3P36062 692 aa3.27□□□□□ -1.89
SXM1YDR395W HSL1P34244 1518 aa3.27□□□□□ -1.89
SXM1YDR395W YGL015CP33199 130 aa3.27□□□□□ -1.89
SXM1YDR395W CDC27P38042 758 aa3.26□□□□□ -1.89
SXM1YDR395W DRS2P39524 1355 aa3.26□□□□□ -1.89
SXM1YDR395W ITT1Q04638 464 aa3.24□□□□□ -1.89
SXM1YDR395W RRD1P40454 393 aaKnown RBP3.23□□□□□ -1.89
SXM1YDR395W TAF2P23255 1407 aa3.21□□□□□ -1.89
SXM1YDR395W YKR023WP36119 530 aaKnown RBP3.2□□□□□ -1.9
SXM1YDR395W RPL17AP05740 184 aaKnown RBP3.2□□□□□ -1.9
SXM1YDR395W SPT21P35209 758 aa3.2□□□□□ -1.9
SXM1YDR395W RPL17BP46990 184 aaKnown RBP3.2□□□□□ -1.9
SXM1YDR395W ATG2P53855 1592 aa3.19□□□□□ -1.9
SXM1YDR395W BUD31P25337 157 aaPredicted RBP3.19□□□□□ -1.9
SXM1YDR395W REB1P21538 810 aa3.15□□□□□ -1.91
SXM1YDR395W MAP2P38174 421 aaKnown RBP3.14□□□□□ -1.91
SXM1YDR395W DOP1Q03921 1698 aa3.11□□□□□ -1.91
SXM1YDR395W DCD1P06773 312 aa3.11□□□□□ -1.91
SXM1YDR395W UBP10P53874 792 aaPredicted RBP3.11□□□□□ -1.91
SXM1YDR395W SSA1P10591 642 aaKnown RBP3.11□□□□□ -1.91
SXM1YDR395W YPK9Q12697 1472 aa3.1□□□□□ -1.91
SXM1YDR395W TRM732Q03496 1420 aa3.1□□□□□ -1.91
SXM1YDR395W TFC8Q12308 588 aa3.1□□□□□ -1.91
SXM1YDR395W ESP1Q03018 1630 aa3.1□□□□□ -1.91
SXM1YDR395W GLN1P32288 370 aaKnown RBP3.09□□□□□ -1.91
SXM1YDR395W TRM3Q07527 1436 aa3.09□□□□□ -1.91
SXM1YDR395W CHD1P32657 1468 aa3.07□□□□□ -1.92
SXM1YDR395W HOP09932 586 aa3.07□□□□□ -1.92
SXM1YDR395W VPS15P22219 1454 aa3.05□□□□□ -1.92
SXM1YDR395W PAN1P32521 1480 aa3.03□□□□□ -1.92
SXM1YDR395W DNF3Q12674 1656 aa3.03□□□□□ -1.92
SXM1YDR395W NUP170P38181 1502 aa3.02□□□□□ -1.93
SXM1YDR395W EDE1P34216 1381 aa3.01□□□□□ -1.93
SXM1YDR395W YAH1Q12184 172 aaKnown RBP3.01□□□□□ -1.93
SXM1YDR395W BCH2P36122 765 aa3□□□□□ -1.93
SXM1YDR395W SCC2Q04002 1493 aa3□□□□□ -1.93
SXM1YDR395W HAP1P0CE41 1502 aa2.99□□□□□ -1.93
SXM1YDR395W SCY1P53009 804 aa2.99□□□□□ -1.93
SXM1YDR395W RIM101P33400 625 aa2.98□□□□□ -1.93
SXM1YDR395W YRF1-1P0CX20 1796 aa2.98□□□□□ -1.93
SXM1YDR395W YRF1-5P0CX21 1796 aa2.98□□□□□ -1.93
SXM1YDR395W YRF1-8P0CX22 1796 aa2.98□□□□□ -1.93
SXM1YDR395W TY1B-NL2Q99337 1749 aaKnown RBP2.98□□□□□ -1.93
SXM1YDR395W CHC1P22137 1653 aaKnown RBP2.98□□□□□ -1.93
SXM1YDR395W SPO14P36126 1683 aa2.98□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms