Protein–RNA interactions for Protein: Q9H3R1

NDST4, Bifunctional heparan sulfate N-deacetylase/N-sulfotransferase 4, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDST4Q9H3R1 TCF15-201ENST00000246080 1555 ntAPPRIS P1 TSL 1 (best) BASIC36.8■■■■□ 3.48
NDST4Q9H3R1 FBLL1-201ENST00000338333 1519 ntAPPRIS P1 BASIC36.69■■■■□ 3.46
NDST4Q9H3R1 AL356512.1-201ENST00000607453 1739 ntBASIC36.13■■■■□ 3.37
NDST4Q9H3R1 SEPT3-204ENST00000406029 1866 ntTSL 5 BASIC36.03■■■■□ 3.36
NDST4Q9H3R1 HES6-203ENST00000409160 1600 ntTSL 2 BASIC35.97■■■■□ 3.35
NDST4Q9H3R1 CSNK1E-204ENST00000403904 1580 ntAPPRIS P1 TSL 5 BASIC35.93■■■■□ 3.34
NDST4Q9H3R1 PRR5-217ENST00000617066 1726 ntTSL 5 BASIC35.65■■■■□ 3.3
NDST4Q9H3R1 AES-202ENST00000327141 1608 ntAPPRIS P1 TSL 1 (best) BASIC35.54■■■■□ 3.28
NDST4Q9H3R1 AC116565.1-201ENST00000610212 2421 ntAPPRIS P1 BASIC35.38■■■■□ 3.26
NDST4Q9H3R1 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC35.36■■■■□ 3.25
NDST4Q9H3R1 PRR5-216ENST00000611394 1843 ntTSL 2 BASIC35.26■■■■□ 3.24
NDST4Q9H3R1 PHF10-201ENST00000339209 1719 ntAPPRIS P4 TSL 1 (best) BASIC35.07■■■■□ 3.2
NDST4Q9H3R1 PTF1A-201ENST00000376504 1537 ntAPPRIS P1 TSL 1 (best) BASIC34.62■■■■□ 3.13
NDST4Q9H3R1 RAB12-201ENST00000329286 2137 ntAPPRIS P1 TSL 1 (best) BASIC34.59■■■■□ 3.13
NDST4Q9H3R1 SSSCA1-205ENST00000527920 806 ntTSL 3 BASIC34.56■■■■□ 3.12
NDST4Q9H3R1 CYHR1-209ENST00000530374 1870 ntTSL 3 BASIC34.5■■■■□ 3.11
NDST4Q9H3R1 FAM149A-205ENST00000502970 1990 ntAPPRIS P2 TSL 5 BASIC34.47■■■■□ 3.11
NDST4Q9H3R1 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC34.35■■■■□ 3.09
NDST4Q9H3R1 NECTIN3-201ENST00000319792 1549 ntAPPRIS ALT2 TSL 1 (best) BASIC34.31■■■■□ 3.08
NDST4Q9H3R1 ZNF358-202ENST00000597229 1954 ntAPPRIS P1 TSL 2 BASIC34.2■■■■□ 3.07
NDST4Q9H3R1 PPP2CB-201ENST00000221138 2006 ntAPPRIS P1 TSL 1 (best) BASIC34.1■■■■□ 3.05
NDST4Q9H3R1 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC33.92■■■■□ 3.02
NDST4Q9H3R1 CAPNS1-206ENST00000588815 1471 ntAPPRIS P2 TSL 1 (best) BASIC33.92■■■■□ 3.02
NDST4Q9H3R1 ACOT7-209ENST00000545482 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC33.79■■■■□ 3
NDST4Q9H3R1 HRAS-203ENST00000397596 1100 ntAPPRIS P1 TSL 3 BASIC33.76■■■□□ 2.99
NDST4Q9H3R1 TRIP10-202ENST00000313285 2035 ntAPPRIS P1 TSL 1 (best) BASIC33.75■■■□□ 2.99
NDST4Q9H3R1 OLFM1-208ENST00000392991 1057 ntTSL 2 BASIC33.73■■■□□ 2.99
NDST4Q9H3R1 MPND-207ENST00000599840 1611 ntAPPRIS ALT2 TSL 5 BASIC33.68■■■□□ 2.98
NDST4Q9H3R1 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC33.67■■■□□ 2.98
NDST4Q9H3R1 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC33.66■■■□□ 2.98
NDST4Q9H3R1 MPND-201ENST00000262966 1567 ntAPPRIS P3 TSL 1 (best) BASIC33.64■■■□□ 2.98
NDST4Q9H3R1 NT5DC2-203ENST00000459839 1639 ntTSL 1 (best) BASIC33.63■■■□□ 2.97
NDST4Q9H3R1 FAM149A-215ENST00000514153 2070 ntAPPRIS P2 TSL 5 BASIC33.49■■■□□ 2.95
NDST4Q9H3R1 TAF5L-202ENST00000366674 492 ntTSL 3 BASIC33.4■■■□□ 2.94
NDST4Q9H3R1 SLC25A28-201ENST00000370495 1451 ntAPPRIS P1 TSL 1 (best) BASIC33.39■■■□□ 2.94
NDST4Q9H3R1 KHSRP-213ENST00000619396 2226 ntAPPRIS ALT2 TSL 5 BASIC33.37■■■□□ 2.93
NDST4Q9H3R1 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC33.35■■■□□ 2.93
NDST4Q9H3R1 CCM2-219ENST00000544363 1620 ntTSL 3 BASIC33.34■■■□□ 2.93
NDST4Q9H3R1 ANKRD60-201ENST00000457363 1038 ntAPPRIS P1 TSL 5 BASIC33.33■■■□□ 2.93
NDST4Q9H3R1 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC33.31■■■□□ 2.92
NDST4Q9H3R1 METRNL-201ENST00000320095 1605 ntAPPRIS P1 TSL 1 (best) BASIC33.24■■■□□ 2.91
NDST4Q9H3R1 PPP2CB-204ENST00000518564 691 ntTSL 3 BASIC32.97■■■□□ 2.87
NDST4Q9H3R1 UBE2M-201ENST00000253023 1508 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
NDST4Q9H3R1 B4GALT2-203ENST00000372324 2203 ntAPPRIS P1 TSL 1 (best) BASIC32.94■■■□□ 2.86
NDST4Q9H3R1 INO80B-WBP1-202ENST00000452361 2040 ntAPPRIS P5 TSL 2 BASIC32.92■■■□□ 2.86
NDST4Q9H3R1 PABPN1-201ENST00000216727 2001 ntAPPRIS P2 TSL 1 (best) BASIC32.92■■■□□ 2.86
NDST4Q9H3R1 MAPK3-201ENST00000263025 1861 ntAPPRIS P3 TSL 1 (best) BASIC32.86■■■□□ 2.85
NDST4Q9H3R1 CSNK1E-206ENST00000413574 1631 ntTSL 5 BASIC32.84■■■□□ 2.85
NDST4Q9H3R1 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC32.76■■■□□ 2.84
NDST4Q9H3R1 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC32.76■■■□□ 2.83
NDST4Q9H3R1 ILK-212ENST00000532063 1617 ntTSL 2 BASIC32.64■■■□□ 2.82
NDST4Q9H3R1 CRIP2-201ENST00000329146 1857 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
NDST4Q9H3R1 HAPLN2-201ENST00000255039 1771 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
NDST4Q9H3R1 NKAIN4-203ENST00000370316 1430 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
NDST4Q9H3R1 MAPK3-202ENST00000322266 1743 ntTSL 5 BASIC32.49■■■□□ 2.79
NDST4Q9H3R1 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC32.43■■■□□ 2.78
NDST4Q9H3R1 C11orf68-202ENST00000449692 1559 ntAPPRIS P3 TSL 1 (best) BASIC32.38■■■□□ 2.77
NDST4Q9H3R1 LMO2-202ENST00000395833 1687 ntAPPRIS P1 TSL 1 (best) BASIC32.35■■■□□ 2.77
NDST4Q9H3R1 KIAA2013-203ENST00000616327 2170 ntAPPRIS P1 TSL 5 BASIC32.33■■■□□ 2.77
NDST4Q9H3R1 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
NDST4Q9H3R1 CMTM4-204ENST00000563952 1023 ntTSL 1 (best) BASIC32.25■■■□□ 2.75
NDST4Q9H3R1 C11orf84-201ENST00000294244 2024 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
NDST4Q9H3R1 FEZF2-203ENST00000486811 2001 ntAPPRIS P1 TSL 5 BASIC32.23■■■□□ 2.75
NDST4Q9H3R1 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC32.22■■■□□ 2.75
NDST4Q9H3R1 GALR3-201ENST00000249041 1157 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
NDST4Q9H3R1 NT5M-207ENST00000616989 1635 ntTSL 1 (best) BASIC32.2■■■□□ 2.75
NDST4Q9H3R1 SSBP3-204ENST00000371320 2077 ntAPPRIS P3 TSL 1 (best) BASIC32.19■■■□□ 2.74
NDST4Q9H3R1 CTDNEP1-208ENST00000573600 1724 ntAPPRIS P1 TSL 5 BASIC32.1■■■□□ 2.73
NDST4Q9H3R1 RAN-202ENST00000392369 1530 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
NDST4Q9H3R1 CSNK1E-205ENST00000405675 2127 ntTSL 5 BASIC32.05■■■□□ 2.72
NDST4Q9H3R1 AGAP1-204ENST00000409457 2165 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
NDST4Q9H3R1 INO80B-203ENST00000409917 796 ntTSL 2 BASIC32.03■■■□□ 2.72
NDST4Q9H3R1 AL357033.3-201ENST00000620143 614 ntTSL 3 BASIC32.02■■■□□ 2.72
NDST4Q9H3R1 GPI-201ENST00000356487 2210 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
NDST4Q9H3R1 GRASP-206ENST00000552049 1688 ntTSL 1 (best) BASIC31.92■■■□□ 2.7
NDST4Q9H3R1 CDV3-203ENST00000431519 955 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
NDST4Q9H3R1 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.9■■■□□ 2.7
NDST4Q9H3R1 FEZF2-201ENST00000283268 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.88■■■□□ 2.69
NDST4Q9H3R1 TPRG1L-201ENST00000344579 2189 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
NDST4Q9H3R1 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
NDST4Q9H3R1 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
NDST4Q9H3R1 CACNG8-202ENST00000638874 1278 ntAPPRIS P2 TSL 1 (best) BASIC31.82■■■□□ 2.68
NDST4Q9H3R1 Z97634.1-201ENST00000412293 1715 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
NDST4Q9H3R1 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
NDST4Q9H3R1 AC015813.7-201ENST00000623294 581 ntBASIC31.78■■■□□ 2.68
NDST4Q9H3R1 AC145285.7-201ENST00000614819 1539 ntBASIC31.76■■■□□ 2.68
NDST4Q9H3R1 AL136373.1-201ENST00000634804 1449 ntAPPRIS P1 BASIC31.71■■■□□ 2.67
NDST4Q9H3R1 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC31.69■■■□□ 2.66
NDST4Q9H3R1 HAGHL-201ENST00000341413 1701 ntTSL 2 BASIC31.67■■■□□ 2.66
NDST4Q9H3R1 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC31.65■■■□□ 2.66
NDST4Q9H3R1 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC31.65■■■□□ 2.66
NDST4Q9H3R1 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC31.63■■■□□ 2.65
NDST4Q9H3R1 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
NDST4Q9H3R1 HOXB3-208ENST00000476342 1420 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
NDST4Q9H3R1 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
NDST4Q9H3R1 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC31.57■■■□□ 2.64
NDST4Q9H3R1 NT5M-201ENST00000389022 1617 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
NDST4Q9H3R1 SERINC2-201ENST00000373709 1997 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
NDST4Q9H3R1 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
NDST4Q9H3R1 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC31.51■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 14.3 ms