RNA–Protein interactions for RNA: YMR041C

ARA2, Transcript of NAD-dependent arabinose dehydrogenase, yeastyeast

Gene ARA2, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ARA2YMR041C MTC1P47018 478 aaKnown RBP21.91■■□□□ 1.1
ARA2YMR041C DRS1P32892 752 aaKnown RBP21.74■■□□□ 1.07
ARA2YMR041C BFR2Q06631 534 aaKnown RBP18.7■□□□□ 0.58
ARA2YMR041C DIP2Q12220 943 aaPredicted RBP18.59■□□□□ 0.57
ARA2YMR041C AVT3P36062 692 aa18.3■□□□□ 0.52
ARA2YMR041C FAP1P53971 965 aa18.24■□□□□ 0.51
ARA2YMR041C ISW2Q08773 1120 aa17.87■□□□□ 0.45
ARA2YMR041C PRI1P10363 409 aa17.75■□□□□ 0.43
ARA2YMR041C RPG1P38249 964 aaKnown RBP17.65■□□□□ 0.42
ARA2YMR041C RSE1Q04693 1361 aaKnown RBP17.63■□□□□ 0.41
ARA2YMR041C AAD16Q02895 342 aa17.46■□□□□ 0.39
ARA2YMR041C TFA1P36100 482 aa17.43■□□□□ 0.38
ARA2YMR041C PRY3P47033 881 aa17.07■□□□□ 0.32
ARA2YMR041C RPL17AP05740 184 aaKnown RBP16.98■□□□□ 0.31
ARA2YMR041C RPL17BP46990 184 aaKnown RBP16.98■□□□□ 0.31
ARA2YMR041C TSR3Q12094 313 aaKnown RBP16.83■□□□□ 0.28
ARA2YMR041C REB1P21538 810 aa16.79■□□□□ 0.28
ARA2YMR041C SPT21P35209 758 aa16.35■□□□□ 0.21
ARA2YMR041C MRPL32P25348 183 aa16.18■□□□□ 0.18
ARA2YMR041C YCK3P39962 524 aa16.17■□□□□ 0.18
ARA2YMR041C HAA1Q12753 694 aaKnown RBP16.12■□□□□ 0.17
ARA2YMR041C RIM101P33400 625 aa16.08■□□□□ 0.16
ARA2YMR041C YKR023WP36119 530 aaKnown RBP15.87■□□□□ 0.13
ARA2YMR041C CDC27P38042 758 aa15.59■□□□□ 0.09
ARA2YMR041C OXP1P28273 1286 aa15.56■□□□□ 0.08
ARA2YMR041C TFC8Q12308 588 aa15.55■□□□□ 0.08
ARA2YMR041C HOP09932 586 aa15.53■□□□□ 0.08
ARA2YMR041C DCD1P06773 312 aa15.42■□□□□ 0.06
ARA2YMR041C YIL055CP40523 627 aaKnown RBP15.34■□□□□ 0.05
ARA2YMR041C PTP3P40048 928 aa15.33■□□□□ 0.04
ARA2YMR041C YAH1Q12184 172 aaKnown RBP15.27■□□□□ 0.04
ARA2YMR041C SSP1P38871 571 aa15.24■□□□□ 0.03
ARA2YMR041C YGL015CP33199 130 aa15.16■□□□□ 0.02
ARA2YMR041C RSM7P47150 247 aa15.11■□□□□ 0.01
ARA2YMR041C BCH2P36122 765 aa15.08■□□□□ 0
ARA2YMR041C YLR271WQ06152 274 aa15.08■□□□□ 0
ARA2YMR041C ARP8Q12386 881 aaKnown RBP RIP-Chip data15.02■□□□□ -0not detected
ARA2YMR041C UBP10P53874 792 aaPredicted RBP15.01□□□□□ -0.01
ARA2YMR041C MAP2P38174 421 aaKnown RBP14.95□□□□□ -0.02
ARA2YMR041C SCY1P53009 804 aa14.89□□□□□ -0.03
ARA2YMR041C AI2P03876 854 aa14.86□□□□□ -0.03
ARA2YMR041C EPS1P40557 701 aa14.81□□□□□ -0.04
ARA2YMR041C BBC1P47068 1157 aa14.79□□□□□ -0.04
ARA2YMR041C MGA2P40578 1113 aa14.73□□□□□ -0.05
ARA2YMR041C PSD2P53037 1138 aaKnown RBP14.72□□□□□ -0.05
ARA2YMR041C BDF1P35817 686 aa14.71□□□□□ -0.05
ARA2YMR041C SLX5P32828 619 aaKnown RBP14.64□□□□□ -0.07
ARA2YMR041C CST9Q06032 482 aa14.61□□□□□ -0.07
ARA2YMR041C RQC2Q12532 1038 aaKnown RBP14.48□□□□□ -0.09
ARA2YMR041C MRM1P25270 412 aa14.39□□□□□ -0.11
ARA2YMR041C TIF4632P39936 914 aaKnown RBP14.37□□□□□ -0.11
ARA2YMR041C TGL3P40308 642 aa14.29□□□□□ -0.12
ARA2YMR041C DMA1P38823 416 aa14.24□□□□□ -0.13
ARA2YMR041C RTG3P38165 486 aa14.19□□□□□ -0.14
ARA2YMR041C RCR1P38212 213 aa14.13□□□□□ -0.15
ARA2YMR041C NSR1P27476 414 aaKnown RBP RIP-Chip data14.07□□□□□ -0.16not detected
ARA2YMR041C RAM2P29703 316 aa14.05□□□□□ -0.16
ARA2YMR041C VPS29P38759 282 aa14.05□□□□□ -0.16
ARA2YMR041C YAP5P40574 245 aa13.97□□□□□ -0.17
ARA2YMR041C YMR1P47147 688 aaKnown RBP RIP-Chip data13.97□□□□□ -0.17not detected
ARA2YMR041C YOR238WQ08634 303 aa13.92□□□□□ -0.18
ARA2YMR041C MAK11P20484 414 aaKnown RBP13.88□□□□□ -0.19
ARA2YMR041C DBP1P24784 617 aaKnown RBP13.86□□□□□ -0.19
ARA2YMR041C STS1P38637 319 aa13.85□□□□□ -0.19
ARA2YMR041C MST1P07236 462 aa13.84□□□□□ -0.19
ARA2YMR041C YFR006WP43590 535 aa13.82□□□□□ -0.2
ARA2YMR041C PIB1Q06651 286 aa13.78□□□□□ -0.2
ARA2YMR041C SET1P38827 1080 aaKnown RBP13.69□□□□□ -0.22
ARA2YMR041C COQ8P27697 501 aa13.67□□□□□ -0.22
ARA2YMR041C MIF2P35201 549 aa13.63□□□□□ -0.23
ARA2YMR041C VMA1P17255 1071 aaKnown RBP13.62□□□□□ -0.23
ARA2YMR041C GTT3P39996 337 aa13.61□□□□□ -0.23
ARA2YMR041C EDS1P38073 919 aa13.6□□□□□ -0.23
ARA2YMR041C SAS10Q12136 610 aaPredicted RBP13.59□□□□□ -0.23
ARA2YMR041C NOP53Q12080 455 aaKnown RBP13.56□□□□□ -0.24
ARA2YMR041C SAM3Q08986 587 aa13.51□□□□□ -0.25
ARA2YMR041C PTC3P34221 468 aaKnown RBP13.5□□□□□ -0.25
ARA2YMR041C IFH1P39520 1085 aa13.49□□□□□ -0.25
ARA2YMR041C YPR148CQ06523 435 aa13.48□□□□□ -0.25
ARA2YMR041C UBP9P39967 754 aa13.45□□□□□ -0.26
ARA2YMR041C WSC3Q12215 556 aa13.41□□□□□ -0.26
ARA2YMR041C YOL036WQ08206 761 aa13.4□□□□□ -0.26
ARA2YMR041C YBL029C-AQ3E756 94 aa13.39□□□□□ -0.27
ARA2YMR041C VPS70P47161 811 aa13.38□□□□□ -0.27
ARA2YMR041C GRE2Q12068 342 aaKnown RBP13.37□□□□□ -0.27
ARA2YMR041C GYP5Q12344 894 aa13.37□□□□□ -0.27
ARA2YMR041C MSB4Q12317 492 aa13.35□□□□□ -0.27
ARA2YMR041C SET4P42948 560 aa13.34□□□□□ -0.27
ARA2YMR041C ATH1P48016 1211 aa13.34□□□□□ -0.27
ARA2YMR041C VNX1P42839 908 aa13.33□□□□□ -0.28
ARA2YMR041C BUD31P25337 157 aaPredicted RBP13.31□□□□□ -0.28
ARA2YMR041C GUT1P32190 709 aa13.31□□□□□ -0.28
ARA2YMR041C ABP1P15891 592 aaKnown RBP13.29□□□□□ -0.28
ARA2YMR041C CKB1P43639 278 aa13.28□□□□□ -0.28
ARA2YMR041C DCW1P36091 449 aa13.23□□□□□ -0.29
ARA2YMR041C EAP1P36041 632 aaKnown RBP13.22□□□□□ -0.29
ARA2YMR041C TIF11P38912 153 aaKnown RBP13.22□□□□□ -0.29
ARA2YMR041C SPP1Q03012 353 aa13.22□□□□□ -0.29
ARA2YMR041C HTA1P04911 132 aaKnown RBP13.19□□□□□ -0.3
ARA2YMR041C HTA2P04912 132 aa13.19□□□□□ -0.3
Retrieved 100 of 5,963 RNA–protein pairs in 22.3 ms