RNA–Protein interactions for RNA: YNL229C

URE2, Transcript of Nitrogen catabolite repression transcriptional regulator, yeastyeast

Gene URE2, Length 1,065 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
URE2YNL229C MTC1P47018 478 aaKnown RBP20.59■□□□□ 0.89
URE2YNL229C DRS1P32892 752 aaKnown RBP19.8■□□□□ 0.76
URE2YNL229C FAP1P53971 965 aa19.46■□□□□ 0.71
URE2YNL229C PRY3P47033 881 aa18.35■□□□□ 0.53
URE2YNL229C AAD16Q02895 342 aa17.63■□□□□ 0.41
URE2YNL229C PRI1P10363 409 aa17.61■□□□□ 0.41
URE2YNL229C YCK3P39962 524 aa17.4■□□□□ 0.38
URE2YNL229C DIP2Q12220 943 aaPredicted RBP17.17■□□□□ 0.34
URE2YNL229C HAA1Q12753 694 aaKnown RBP17.04■□□□□ 0.32
URE2YNL229C ISW2Q08773 1120 aa17.02■□□□□ 0.32
URE2YNL229C RPG1P38249 964 aaKnown RBP16.8■□□□□ 0.28
URE2YNL229C BFR2Q06631 534 aaKnown RBP16.73■□□□□ 0.27
URE2YNL229C AVT3P36062 692 aa16.65■□□□□ 0.26
URE2YNL229C TSR3Q12094 313 aaKnown RBP16.65■□□□□ 0.26
URE2YNL229C RSE1Q04693 1361 aaKnown RBP16.46■□□□□ 0.23
URE2YNL229C MRPL32P25348 183 aa15.9■□□□□ 0.14
URE2YNL229C RPL17AP05740 184 aaKnown RBP15.88■□□□□ 0.13
URE2YNL229C RPL17BP46990 184 aaKnown RBP15.88■□□□□ 0.13
URE2YNL229C REB1P21538 810 aa15.81■□□□□ 0.12
URE2YNL229C YGL015CP33199 130 aa15.56■□□□□ 0.08
URE2YNL229C SPT21P35209 758 aa15.18■□□□□ 0.02
URE2YNL229C TFA1P36100 482 aa15.09■□□□□ 0.01
URE2YNL229C CDC27P38042 758 aa15□□□□□ -0.01
URE2YNL229C YKR023WP36119 530 aaKnown RBP14.9□□□□□ -0.02
URE2YNL229C BUD31P25337 157 aaPredicted RBP14.8□□□□□ -0.04
URE2YNL229C RIM101P33400 625 aa14.8□□□□□ -0.04
URE2YNL229C MAP2P38174 421 aaKnown RBP14.64□□□□□ -0.07
URE2YNL229C HOP09932 586 aa14.62□□□□□ -0.07
URE2YNL229C TFC8Q12308 588 aa14.62□□□□□ -0.07
URE2YNL229C UBP10P53874 792 aaPredicted RBP14.56□□□□□ -0.08
URE2YNL229C DCD1P06773 312 aa14.51□□□□□ -0.09
URE2YNL229C OXP1P28273 1286 aa14.29□□□□□ -0.12
URE2YNL229C YIL055CP40523 627 aaKnown RBP14.21□□□□□ -0.13
URE2YNL229C BCH2P36122 765 aa14.17□□□□□ -0.14
URE2YNL229C PTP3P40048 928 aa14.14□□□□□ -0.15
URE2YNL229C SCY1P53009 804 aa14.14□□□□□ -0.15
URE2YNL229C YAH1Q12184 172 aaKnown RBP14.01□□□□□ -0.17
URE2YNL229C SIS1P25294 352 aaKnown RBP13.99□□□□□ -0.17
URE2YNL229C TIF4632P39936 914 aaKnown RBP13.96□□□□□ -0.17
URE2YNL229C SLX5P32828 619 aaKnown RBP13.95□□□□□ -0.18
URE2YNL229C TGL3P40308 642 aa13.95□□□□□ -0.18
URE2YNL229C RSM7P47150 247 aa13.93□□□□□ -0.18
URE2YNL229C EPS1P40557 701 aa13.86□□□□□ -0.19
URE2YNL229C UBP9P39967 754 aa13.84□□□□□ -0.19
URE2YNL229C BBC1P47068 1157 aa13.79□□□□□ -0.2
URE2YNL229C BDF1P35817 686 aa13.78□□□□□ -0.2
URE2YNL229C AI2P03876 854 aa13.76□□□□□ -0.21
URE2YNL229C SSP1P38871 571 aa13.76□□□□□ -0.21
URE2YNL229C YLR271WQ06152 274 aa13.76□□□□□ -0.21
URE2YNL229C ARP8Q12386 881 aaKnown RBP RIP-Chip data13.69□□□□□ -0.22not detected
URE2YNL229C PSD2P53037 1138 aaKnown RBP13.5□□□□□ -0.25
URE2YNL229C MGA2P40578 1113 aa13.4□□□□□ -0.26
URE2YNL229C MRM1P25270 412 aa13.29□□□□□ -0.28
URE2YNL229C CST9Q06032 482 aa13.29□□□□□ -0.28
URE2YNL229C YBL029C-AQ3E756 94 aa13.29□□□□□ -0.28
URE2YNL229C NSR1P27476 414 aaKnown RBP RIP-Chip data13.27□□□□□ -0.29not detected
URE2YNL229C MST1P07236 462 aa13.23□□□□□ -0.29
URE2YNL229C YOR238WQ08634 303 aa13.23□□□□□ -0.29
URE2YNL229C YAP5P40574 245 aa13.22□□□□□ -0.29
URE2YNL229C RTG3P38165 486 aa13.08□□□□□ -0.32
URE2YNL229C VNX1P42839 908 aa13.06□□□□□ -0.32
URE2YNL229C YMR1P47147 688 aaKnown RBP RIP-Chip data12.96□□□□□ -0.33not detected
URE2YNL229C VPS29P38759 282 aa12.95□□□□□ -0.34
URE2YNL229C GTT3P39996 337 aa12.92□□□□□ -0.34
URE2YNL229C SPP1Q03012 353 aa12.92□□□□□ -0.34
URE2YNL229C PIB1Q06651 286 aa12.92□□□□□ -0.34
URE2YNL229C WSC3Q12215 556 aa12.92□□□□□ -0.34
URE2YNL229C RCR1P38212 213 aa12.91□□□□□ -0.34
URE2YNL229C DBP1P24784 617 aaKnown RBP12.87□□□□□ -0.35
URE2YNL229C YFR006WP43590 535 aa12.81□□□□□ -0.36
URE2YNL229C STS1P38637 319 aa12.79□□□□□ -0.36
URE2YNL229C AIR2Q12476 344 aaKnown RBP12.78□□□□□ -0.36
URE2YNL229C TIF11P38912 153 aaKnown RBP12.7□□□□□ -0.38
URE2YNL229C FKH1P40466 484 aa12.69□□□□□ -0.38
URE2YNL229C RAM2P29703 316 aa12.68□□□□□ -0.38
URE2YNL229C VMA1P17255 1071 aaKnown RBP12.67□□□□□ -0.38
URE2YNL229C YJL171CP46992 396 aa12.66□□□□□ -0.38
URE2YNL229C MAK11P20484 414 aaKnown RBP12.63□□□□□ -0.39
URE2YNL229C MSB4Q12317 492 aa12.62□□□□□ -0.39
URE2YNL229C YOL036WQ08206 761 aa12.58□□□□□ -0.4
URE2YNL229C SAM3Q08986 587 aa12.57□□□□□ -0.4
URE2YNL229C SET4P42948 560 aa12.56□□□□□ -0.4
URE2YNL229C EAP1P36041 632 aaKnown RBP12.54□□□□□ -0.4
URE2YNL229C ULI1P43604 169 aa12.54□□□□□ -0.4
URE2YNL229C LDB19Q12502 818 aa12.54□□□□□ -0.4
URE2YNL229C MIF2P35201 549 aa12.51□□□□□ -0.41
URE2YNL229C IOC2Q12072 812 aa12.5□□□□□ -0.41
URE2YNL229C GYP5Q12344 894 aa12.46□□□□□ -0.41
URE2YNL229C COQ8P27697 501 aa12.44□□□□□ -0.42
URE2YNL229C ABP1P15891 592 aaKnown RBP12.43□□□□□ -0.42
URE2YNL229C BMT6Q12291 365 aa12.41□□□□□ -0.42
URE2YNL229C TRP5P00931 707 aaKnown RBP12.4□□□□□ -0.42
URE2YNL229C EDS1P38073 919 aa12.39□□□□□ -0.43
URE2YNL229C GRE2Q12068 342 aaKnown RBP12.38□□□□□ -0.43
URE2YNL229C PTC3P34221 468 aaKnown RBP12.37□□□□□ -0.43
URE2YNL229C DCW1P36091 449 aa12.34□□□□□ -0.43
URE2YNL229C HTA1P04911 132 aaKnown RBP12.33□□□□□ -0.44
URE2YNL229C HTA2P04912 132 aa12.33□□□□□ -0.44
URE2YNL229C NOP53Q12080 455 aaKnown RBP12.33□□□□□ -0.44
URE2YNL229C ATH1P48016 1211 aa12.32□□□□□ -0.44
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms