Protein–RNA interactions for Protein: Q9Y6Q1

CAPN6, Calpain-6, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN6Q9Y6Q1 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC19.91■□□□□ 0.78
CAPN6Q9Y6Q1 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CAPN6Q9Y6Q1 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CAPN6Q9Y6Q1 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CAPN6Q9Y6Q1 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CAPN6Q9Y6Q1 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CAPN6Q9Y6Q1 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CAPN6Q9Y6Q1 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.91■□□□□ 0.78
CAPN6Q9Y6Q1 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CAPN6Q9Y6Q1 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
CAPN6Q9Y6Q1 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CAPN6Q9Y6Q1 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CAPN6Q9Y6Q1 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.91■□□□□ 0.78
CAPN6Q9Y6Q1 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC19.91■□□□□ 0.78
CAPN6Q9Y6Q1 Z85996.1-201ENST00000494644 937 ntBASIC19.91■□□□□ 0.78
CAPN6Q9Y6Q1 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.91■□□□□ 0.78
CAPN6Q9Y6Q1 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC19.91■□□□□ 0.78
CAPN6Q9Y6Q1 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC19.91■□□□□ 0.78
CAPN6Q9Y6Q1 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CAPN6Q9Y6Q1 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CAPN6Q9Y6Q1 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CAPN6Q9Y6Q1 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.91■□□□□ 0.78
CAPN6Q9Y6Q1 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.91■□□□□ 0.78
CAPN6Q9Y6Q1 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
CAPN6Q9Y6Q1 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CAPN6Q9Y6Q1 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC19.9■□□□□ 0.78
CAPN6Q9Y6Q1 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CAPN6Q9Y6Q1 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CAPN6Q9Y6Q1 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CAPN6Q9Y6Q1 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CAPN6Q9Y6Q1 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CAPN6Q9Y6Q1 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CAPN6Q9Y6Q1 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CAPN6Q9Y6Q1 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC19.9■□□□□ 0.78
CAPN6Q9Y6Q1 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CAPN6Q9Y6Q1 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.9■□□□□ 0.78
CAPN6Q9Y6Q1 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CAPN6Q9Y6Q1 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CAPN6Q9Y6Q1 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC19.9■□□□□ 0.78
CAPN6Q9Y6Q1 POU5F1P3-201ENST00000428824 1078 ntBASIC19.9■□□□□ 0.78
CAPN6Q9Y6Q1 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.9■□□□□ 0.78
CAPN6Q9Y6Q1 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CAPN6Q9Y6Q1 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.9■□□□□ 0.78
CAPN6Q9Y6Q1 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC19.9■□□□□ 0.78
CAPN6Q9Y6Q1 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC19.9■□□□□ 0.78
CAPN6Q9Y6Q1 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CAPN6Q9Y6Q1 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CAPN6Q9Y6Q1 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.9■□□□□ 0.78
CAPN6Q9Y6Q1 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CAPN6Q9Y6Q1 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
CAPN6Q9Y6Q1 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CAPN6Q9Y6Q1 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CAPN6Q9Y6Q1 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CAPN6Q9Y6Q1 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
CAPN6Q9Y6Q1 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.78
CAPN6Q9Y6Q1 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
CAPN6Q9Y6Q1 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.78
CAPN6Q9Y6Q1 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
CAPN6Q9Y6Q1 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CAPN6Q9Y6Q1 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CAPN6Q9Y6Q1 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CAPN6Q9Y6Q1 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CAPN6Q9Y6Q1 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CAPN6Q9Y6Q1 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CAPN6Q9Y6Q1 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC19.89■□□□□ 0.77
CAPN6Q9Y6Q1 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CAPN6Q9Y6Q1 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CAPN6Q9Y6Q1 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CAPN6Q9Y6Q1 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC19.89■□□□□ 0.77
CAPN6Q9Y6Q1 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC19.89■□□□□ 0.77
CAPN6Q9Y6Q1 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.89■□□□□ 0.77
CAPN6Q9Y6Q1 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC19.89■□□□□ 0.77
CAPN6Q9Y6Q1 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC19.89■□□□□ 0.77
CAPN6Q9Y6Q1 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CAPN6Q9Y6Q1 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC19.89■□□□□ 0.77
CAPN6Q9Y6Q1 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC19.89■□□□□ 0.77
CAPN6Q9Y6Q1 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CAPN6Q9Y6Q1 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.89■□□□□ 0.77
CAPN6Q9Y6Q1 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.89■□□□□ 0.77
CAPN6Q9Y6Q1 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CAPN6Q9Y6Q1 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC19.89■□□□□ 0.77
CAPN6Q9Y6Q1 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CAPN6Q9Y6Q1 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC19.89■□□□□ 0.77
CAPN6Q9Y6Q1 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CAPN6Q9Y6Q1 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CAPN6Q9Y6Q1 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CAPN6Q9Y6Q1 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CAPN6Q9Y6Q1 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.89■□□□□ 0.77
CAPN6Q9Y6Q1 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CAPN6Q9Y6Q1 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CAPN6Q9Y6Q1 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CAPN6Q9Y6Q1 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CAPN6Q9Y6Q1 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CAPN6Q9Y6Q1 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CAPN6Q9Y6Q1 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CAPN6Q9Y6Q1 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CAPN6Q9Y6Q1 KRT8P32-201ENST00000512863 1461 ntBASIC19.88■□□□□ 0.77
CAPN6Q9Y6Q1 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.88■□□□□ 0.77
CAPN6Q9Y6Q1 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CAPN6Q9Y6Q1 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms