Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
PCDHGB1Q9Y5G3 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGB1Q9Y5G3 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
PCDHGB1Q9Y5G3 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC17.21■□□□□ 0.35
PCDHGB1Q9Y5G3 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGB1Q9Y5G3 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGB1Q9Y5G3 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGB1Q9Y5G3 AL390719.1-204ENST00000412397 1219 ntBASIC17.21■□□□□ 0.35
PCDHGB1Q9Y5G3 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHGB1Q9Y5G3 NME1-207ENST00000480143 964 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHGB1Q9Y5G3 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGB1Q9Y5G3 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC17.21■□□□□ 0.35
PCDHGB1Q9Y5G3 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
PCDHGB1Q9Y5G3 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGB1Q9Y5G3 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC17.21■□□□□ 0.35
PCDHGB1Q9Y5G3 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGB1Q9Y5G3 AL121832.2-201ENST00000610979 668 ntBASIC17.21■□□□□ 0.35
PCDHGB1Q9Y5G3 GAMT-205ENST00000640762 751 ntTSL 5 BASIC17.21■□□□□ 0.35
PCDHGB1Q9Y5G3 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGB1Q9Y5G3 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGB1Q9Y5G3 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
PCDHGB1Q9Y5G3 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGB1Q9Y5G3 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
PCDHGB1Q9Y5G3 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.34
PCDHGB1Q9Y5G3 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.34
PCDHGB1Q9Y5G3 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGB1Q9Y5G3 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDHGB1Q9Y5G3 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDHGB1Q9Y5G3 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGB1Q9Y5G3 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
PCDHGB1Q9Y5G3 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
PCDHGB1Q9Y5G3 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGB1Q9Y5G3 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC17.2■□□□□ 0.34
PCDHGB1Q9Y5G3 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGB1Q9Y5G3 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHGB1Q9Y5G3 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
PCDHGB1Q9Y5G3 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGB1Q9Y5G3 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGB1Q9Y5G3 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHGB1Q9Y5G3 SERP1-205ENST00000487153 657 ntTSL 4 BASIC17.2■□□□□ 0.34
PCDHGB1Q9Y5G3 AC083906.2-201ENST00000511578 360 ntBASIC17.2■□□□□ 0.34
PCDHGB1Q9Y5G3 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC17.2■□□□□ 0.34
PCDHGB1Q9Y5G3 AC142086.2-201ENST00000569753 217 ntBASIC17.2■□□□□ 0.34
PCDHGB1Q9Y5G3 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGB1Q9Y5G3 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PCDHGB1Q9Y5G3 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
PCDHGB1Q9Y5G3 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
PCDHGB1Q9Y5G3 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGB1Q9Y5G3 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGB1Q9Y5G3 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGB1Q9Y5G3 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
PCDHGB1Q9Y5G3 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGB1Q9Y5G3 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGB1Q9Y5G3 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.2■□□□□ 0.34
PCDHGB1Q9Y5G3 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGB1Q9Y5G3 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
PCDHGB1Q9Y5G3 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGB1Q9Y5G3 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
PCDHGB1Q9Y5G3 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGB1Q9Y5G3 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
PCDHGB1Q9Y5G3 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGB1Q9Y5G3 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGB1Q9Y5G3 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHGB1Q9Y5G3 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGB1Q9Y5G3 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGB1Q9Y5G3 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGB1Q9Y5G3 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGB1Q9Y5G3 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC17.19■□□□□ 0.34
PCDHGB1Q9Y5G3 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PCDHGB1Q9Y5G3 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
PCDHGB1Q9Y5G3 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.19■□□□□ 0.34
PCDHGB1Q9Y5G3 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
PCDHGB1Q9Y5G3 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGB1Q9Y5G3 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGB1Q9Y5G3 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGB1Q9Y5G3 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGB1Q9Y5G3 AC007322.1-201ENST00000426983 750 ntBASIC17.19■□□□□ 0.34
PCDHGB1Q9Y5G3 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.19■□□□□ 0.34
PCDHGB1Q9Y5G3 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGB1Q9Y5G3 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC17.19■□□□□ 0.34
PCDHGB1Q9Y5G3 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGB1Q9Y5G3 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGB1Q9Y5G3 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
PCDHGB1Q9Y5G3 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGB1Q9Y5G3 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGB1Q9Y5G3 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
PCDHGB1Q9Y5G3 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
PCDHGB1Q9Y5G3 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGB1Q9Y5G3 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGB1Q9Y5G3 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGB1Q9Y5G3 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
PCDHGB1Q9Y5G3 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHGB1Q9Y5G3 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHGB1Q9Y5G3 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB1Q9Y5G3 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB1Q9Y5G3 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB1Q9Y5G3 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC17.18■□□□□ 0.34
PCDHGB1Q9Y5G3 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
PCDHGB1Q9Y5G3 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.18■□□□□ 0.34
PCDHGB1Q9Y5G3 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms