Protein–RNA interactions for Protein: Q9NRF8

CTPS2, CTP synthase 2, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS2Q9NRF8 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.49■□□□□ 0.39
CTPS2Q9NRF8 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTPS2Q9NRF8 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTPS2Q9NRF8 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTPS2Q9NRF8 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTPS2Q9NRF8 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.49■□□□□ 0.39
CTPS2Q9NRF8 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CTPS2Q9NRF8 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTPS2Q9NRF8 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTPS2Q9NRF8 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CTPS2Q9NRF8 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.49■□□□□ 0.39
CTPS2Q9NRF8 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTPS2Q9NRF8 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.49■□□□□ 0.39
CTPS2Q9NRF8 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTPS2Q9NRF8 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC17.49■□□□□ 0.39
CTPS2Q9NRF8 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.49■□□□□ 0.39
CTPS2Q9NRF8 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
CTPS2Q9NRF8 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.49■□□□□ 0.39
CTPS2Q9NRF8 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.49■□□□□ 0.39
CTPS2Q9NRF8 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTPS2Q9NRF8 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTPS2Q9NRF8 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTPS2Q9NRF8 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTPS2Q9NRF8 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
CTPS2Q9NRF8 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
CTPS2Q9NRF8 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
CTPS2Q9NRF8 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
CTPS2Q9NRF8 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CTPS2Q9NRF8 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
CTPS2Q9NRF8 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CTPS2Q9NRF8 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.48■□□□□ 0.39
CTPS2Q9NRF8 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CTPS2Q9NRF8 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CTPS2Q9NRF8 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.48■□□□□ 0.39
CTPS2Q9NRF8 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.48■□□□□ 0.39
CTPS2Q9NRF8 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC17.48■□□□□ 0.39
CTPS2Q9NRF8 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.48■□□□□ 0.39
CTPS2Q9NRF8 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.48■□□□□ 0.39
CTPS2Q9NRF8 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CTPS2Q9NRF8 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
CTPS2Q9NRF8 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.48■□□□□ 0.39
CTPS2Q9NRF8 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.48■□□□□ 0.39
CTPS2Q9NRF8 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC17.48■□□□□ 0.39
CTPS2Q9NRF8 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTPS2Q9NRF8 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
CTPS2Q9NRF8 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC17.48■□□□□ 0.39
CTPS2Q9NRF8 AC093525.10-201ENST00000625130 1569 ntBASIC17.48■□□□□ 0.39
CTPS2Q9NRF8 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC17.48■□□□□ 0.39
CTPS2Q9NRF8 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CTPS2Q9NRF8 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
CTPS2Q9NRF8 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTPS2Q9NRF8 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
CTPS2Q9NRF8 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.47■□□□□ 0.39
CTPS2Q9NRF8 COMP-202ENST00000425807 2292 ntTSL 2 BASIC17.47■□□□□ 0.39
CTPS2Q9NRF8 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTPS2Q9NRF8 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTPS2Q9NRF8 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTPS2Q9NRF8 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CTPS2Q9NRF8 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTPS2Q9NRF8 AR-207ENST00000612010 3896 ntTSL 5 BASIC17.47■□□□□ 0.39
CTPS2Q9NRF8 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
CTPS2Q9NRF8 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC17.47■□□□□ 0.39
CTPS2Q9NRF8 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTPS2Q9NRF8 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTPS2Q9NRF8 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTPS2Q9NRF8 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CTPS2Q9NRF8 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.47■□□□□ 0.39
CTPS2Q9NRF8 AP002982.1-201ENST00000492365 877 ntBASIC17.47■□□□□ 0.39
CTPS2Q9NRF8 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.47■□□□□ 0.39
CTPS2Q9NRF8 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC17.47■□□□□ 0.39
CTPS2Q9NRF8 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC17.47■□□□□ 0.39
CTPS2Q9NRF8 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.47■□□□□ 0.39
CTPS2Q9NRF8 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.47■□□□□ 0.39
CTPS2Q9NRF8 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTPS2Q9NRF8 TMEM191A-211ENST00000637163 1067 ntBASIC17.47■□□□□ 0.39
CTPS2Q9NRF8 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.47■□□□□ 0.39
CTPS2Q9NRF8 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.47■□□□□ 0.39
CTPS2Q9NRF8 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
CTPS2Q9NRF8 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.47■□□□□ 0.39
CTPS2Q9NRF8 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC17.47■□□□□ 0.39
CTPS2Q9NRF8 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
CTPS2Q9NRF8 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTPS2Q9NRF8 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTPS2Q9NRF8 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CTPS2Q9NRF8 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
CTPS2Q9NRF8 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC17.46■□□□□ 0.39
CTPS2Q9NRF8 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC17.46■□□□□ 0.39
CTPS2Q9NRF8 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTPS2Q9NRF8 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTPS2Q9NRF8 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.46■□□□□ 0.39
CTPS2Q9NRF8 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTPS2Q9NRF8 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CTPS2Q9NRF8 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CTPS2Q9NRF8 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CTPS2Q9NRF8 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.46■□□□□ 0.39
CTPS2Q9NRF8 NIFKP9-201ENST00000419265 221 ntBASIC17.46■□□□□ 0.39
CTPS2Q9NRF8 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CTPS2Q9NRF8 TSPY23P-201ENST00000440136 739 ntBASIC17.46■□□□□ 0.39
CTPS2Q9NRF8 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.46■□□□□ 0.39
CTPS2Q9NRF8 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms